miRNEST 2.0, an integrative microRNA resource :: BLAST
>54388_rco-miR168:pmrd
Length = 156
Score = 77.8 bits (39), Expect = 5e-15
Identities = 39/39 (100%)
Strand = Plus / Plus
Query: 11 cggcggtctctaattcgcttggtgcaggtcgggaactga 49
|||||||||||||||||||||||||||||||||||||||
Sbjct: 5 cggcggtctctaattcgcttggtgcaggtcgggaactga 43
Score = 52.0 bits (26), Expect = 3e-07
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 317 tcccgccttgcatcaactgaatcggtgaccgcggtgaa 354
|||||||||||||||||||||||| ||||| ||||||
Sbjct: 118 tcccgccttgcatcaactgaatcgaagaccggggtgaa 155
>51651_ptc-miR168b:pmrd
Length = 136
Score = 69.9 bits (35), Expect = 1e-12
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 15 ggtctctaattcgcttggtgcaggtcgggaactga 49
|||||||||||||||||||||||||||||||||||
Sbjct: 1 ggtctctaattcgcttggtgcaggtcgggaactga 35
Score = 50.1 bits (25), Expect = 1e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 317 tcccgccttgcatcaactgaatcgg 341
|||||||||||||||||||||||||
Sbjct: 109 tcccgccttgcatcaactgaatcgg 133
>48560_gma-miR168:pmrd
Length = 125
Score = 67.9 bits (34), Expect = 5e-12
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 13 gcggtctctaattcgcttggtgcaggtcgggaac 46
||||||||||||||||||||||||||||||||||
Sbjct: 7 gcggtctctaattcgcttggtgcaggtcgggaac 40
Score = 60.0 bits (30), Expect = 1e-09
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 317 tcccgccttgcatcaactgaatcggtgaccgcggtgaa 354
||||||||||||||||||||||||| | ||||||||||
Sbjct: 87 tcccgccttgcatcaactgaatcggaggccgcggtgaa 124
>54802_vvi-miR168:pmrd
Length = 132
Score = 65.9 bits (33), Expect = 2e-11
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 15 ggtctctaattcgcttggtgcaggtcgggaactgact 51
|||||||||||||||||||||||||||||||| ||||
Sbjct: 1 ggtctctaattcgcttggtgcaggtcgggaaccgact 37
Score = 50.1 bits (25), Expect = 1e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 317 tcccgccttgcatcaactgaatcgg 341
|||||||||||||||||||||||||
Sbjct: 101 tcccgccttgcatcaactgaatcgg 125
>51650_ptc-miR168a:pmrd
Length = 160
Score = 61.9 bits (31), Expect = 3e-10
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 15 ggtctctaattcgcttggtgcaggtcgggaactga 49
||||||| |||||||||||||||||||||||||||
Sbjct: 1 ggtctctgattcgcttggtgcaggtcgggaactga 35
Score = 50.1 bits (25), Expect = 1e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 317 tcccgccttgcatcaactgaatcgg 341
|||||||||||||||||||||||||
Sbjct: 133 tcccgccttgcatcaactgaatcgg 157
>46958_ath-miR168b:pmrd
Length = 124
Score = 61.9 bits (31), Expect = 3e-10
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 11 cggcggtctctaattcgcttggtgcaggtcgggaactga 49
|||||||||| |||||||||||||||||||||||||||
Sbjct: 5 cggcggtctcggattcgcttggtgcaggtcgggaactga 43
>48349_bna-miR168:pmrd
Length = 133
Score = 54.0 bits (27), Expect = 8e-08
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 11 cggcggtctctaattcgcttggtgcaggtcgggaactga 49
|||||| |||| | |||||||||||||||||||||||||
Sbjct: 4 cggcggcctctgactcgcttggtgcaggtcgggaactga 42
>54375_pts-miR168b:pmrd
Length = 140
Score = 50.1 bits (25), Expect = 1e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 25 tcgcttggtgcaggtcgggaactga 49
|||||||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcgggaactga 25
>54374_pts-miR168a:pmrd
Length = 118
Score = 50.1 bits (25), Expect = 1e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 25 tcgcttggtgcaggtcgggaactga 49
|||||||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcgggaactga 25
>54366_ptr-miR168:pmrd
Length = 118
Score = 50.1 bits (25), Expect = 1e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 25 tcgcttggtgcaggtcgggaactga 49
|||||||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcgggaactga 25
>47339_ath-miRf10239-akr:pmrd
Length = 129
Score = 50.1 bits (25), Expect = 1e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 317 tcccgccttgcatcaactgaatcgg 341
|||||||||||||||||||||||||
Sbjct: 97 tcccgccttgcatcaactgaatcgg 121
Score = 48.1 bits (24), Expect = 5e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 23 attcgcttggtgcaggtcgggaac 46
||||||||||||||||||||||||
Sbjct: 11 attcgcttggtgcaggtcgggaac 34
>46957_ath-miR168a:pmrd
Length = 138
Score = 50.1 bits (25), Expect = 1e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 317 tcccgccttgcatcaactgaatcgg 341
|||||||||||||||||||||||||
Sbjct: 102 tcccgccttgcatcaactgaatcgg 126
Score = 48.1 bits (24), Expect = 5e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 23 attcgcttggtgcaggtcgggaac 46
||||||||||||||||||||||||
Sbjct: 16 attcgcttggtgcaggtcgggaac 39
>48649_hte-miR168:pmrd
Length = 140
Score = 48.1 bits (24), Expect = 5e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 25 tcgcttggtgcaggtcgggaactg 48
||||||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcgggaactg 24
>46959_ath-miR168m:pmrd
Length = 104
Score = 44.1 bits (22), Expect = 7e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 25 tcgcttggtgcaggtcgggaac 46
||||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcgggaac 22
>55000_zma-miR168b:pmrd
Length = 104
Score = 42.1 bits (21), Expect = 3e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 317 tcccgccttgcatcaactgaatcgg 341
|||||||||||||||| ||||||||
Sbjct: 66 tcccgccttgcatcaagtgaatcgg 90
