miRNEST 2.0, an integrative microRNA resource :: BLAST
>54665_stu-miR168:pmrd
Length = 133
Score = 73.8 bits (37), Expect = 4e-14
Identities = 55/61 (90%)
Strand = Plus / Plus
Query: 24 tcgcttggtgcaggtcgggacctgcctcgccggcgacaatgacgtcagctgacggtgacg 83
||||||||||||||||||||||| |||||||||| |||||| || ||||||||| ||||
Sbjct: 1 tcgcttggtgcaggtcgggacctacctcgccggcaacaatggcggtagctgacggcgacg 60
Query: 84 g 84
|
Sbjct: 61 g 61
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 127 ggtcccgccttgcatcaactga 148
||||||||||||||||||||||
Sbjct: 112 ggtcccgccttgcatcaactga 133
>54388_rco-miR168:pmrd
Length = 156
Score = 60.0 bits (30), Expect = 6e-10
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 10 cggcggtctctcattcgcttggtgcaggtcggga 43
||||||||||| ||||||||||||||||||||||
Sbjct: 5 cggcggtctctaattcgcttggtgcaggtcggga 38
Score = 52.0 bits (26), Expect = 1e-07
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 129 tcccgccttgcatcaactgaatcggagactgcggtgaa 166
|||||||||||||||||||||||| |||| | ||||||
Sbjct: 118 tcccgccttgcatcaactgaatcgaagaccggggtgaa 155
>48560_gma-miR168:pmrd
Length = 125
Score = 60.0 bits (30), Expect = 6e-10
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 129 tcccgccttgcatcaactgaatcggagactgcggtgaa 166
||||||||||||||||||||||||||| | ||||||||
Sbjct: 87 tcccgccttgcatcaactgaatcggaggccgcggtgaa 124
Score = 56.0 bits (28), Expect = 9e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 12 gcggtctctcattcgcttggtgcaggtcggga 43
||||||||| ||||||||||||||||||||||
Sbjct: 7 gcggtctctaattcgcttggtgcaggtcggga 38
>54802_vvi-miR168:pmrd
Length = 132
Score = 58.0 bits (29), Expect = 2e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 129 tcccgccttgcatcaactgaatcggagac 157
|||||||||||||||||||||||||||||
Sbjct: 101 tcccgccttgcatcaactgaatcggagac 129
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 14 ggtctctcattcgcttggtgcaggtcggga 43
||||||| ||||||||||||||||||||||
Sbjct: 1 ggtctctaattcgcttggtgcaggtcggga 30
>51651_ptc-miR168b:pmrd
Length = 136
Score = 56.0 bits (28), Expect = 9e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 129 tcccgccttgcatcaactgaatcggaga 156
||||||||||||||||||||||||||||
Sbjct: 109 tcccgccttgcatcaactgaatcggaga 136
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 14 ggtctctcattcgcttggtgcaggtcggga 43
||||||| ||||||||||||||||||||||
Sbjct: 1 ggtctctaattcgcttggtgcaggtcggga 30
>51650_ptc-miR168a:pmrd
Length = 160
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 129 tcccgccttgcatcaactgaatcggag 155
|||||||||||||||||||||||||||
Sbjct: 133 tcccgccttgcatcaactgaatcggag 159
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 14 ggtctctcattcgcttggtgcaggtcggga 43
||||||| ||||||||||||||||||||||
Sbjct: 1 ggtctctgattcgcttggtgcaggtcggga 30
>47339_ath-miRf10239-akr:pmrd
Length = 129
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 129 tcccgccttgcatcaactgaatcgga 154
||||||||||||||||||||||||||
Sbjct: 97 tcccgccttgcatcaactgaatcgga 122
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 22 attcgcttggtgcaggtcggga 43
||||||||||||||||||||||
Sbjct: 11 attcgcttggtgcaggtcggga 32
>46958_ath-miR168b:pmrd
Length = 124
Score = 52.0 bits (26), Expect = 1e-07
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 10 cggcggtctctcattcgcttggtgcaggtcggga 43
|||||||||| ||||||||||||||||||||||
Sbjct: 5 cggcggtctcggattcgcttggtgcaggtcggga 38
>46957_ath-miR168a:pmrd
Length = 138
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 129 tcccgccttgcatcaactgaatcgga 154
||||||||||||||||||||||||||
Sbjct: 102 tcccgccttgcatcaactgaatcgga 127
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 22 attcgcttggtgcaggtcggga 43
||||||||||||||||||||||
Sbjct: 16 attcgcttggtgcaggtcggga 37
>55000_zma-miR168b:pmrd
Length = 104
Score = 46.1 bits (23), Expect = 9e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 129 tcccgccttgcatcaactgaatcggag 155
|||||||||||||||| ||||||||||
Sbjct: 66 tcccgccttgcatcaagtgaatcggag 92
>54546_sly-miR168:pmrd
Length = 145
Score = 46.1 bits (23), Expect = 9e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 24 tcgcttggtgcaggtcgggacct 46
|||||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcgggacct 23
Score = 46.1 bits (23), Expect = 9e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 118 cgaaattttggtcccgccttgcatcaactga 148
|||||||| ||||| ||||||||||||||||
Sbjct: 115 cgaaatttgggtcctgccttgcatcaactga 145
>54436_sbi-miR168:pmrd
Length = 106
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 24 tcgcttggtgcaggtcgggacctgcc 49
||||||||||||| ||||||||||||
Sbjct: 21 tcgcttggtgcagatcgggacctgcc 46
>48349_bna-miR168:pmrd
Length = 133
Score = 44.1 bits (22), Expect = 3e-05
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 10 cggcggtctctcattcgcttggtgcaggtcggga 43
|||||| |||| | ||||||||||||||||||||
Sbjct: 4 cggcggcctctgactcgcttggtgcaggtcggga 37
>48649_hte-miR168:pmrd
Length = 140
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 24 tcgcttggtgcaggtcgggacctgc 48
|||||||||||||||||||| ||||
Sbjct: 1 tcgcttggtgcaggtcgggaactgc 25
>54375_pts-miR168b:pmrd
Length = 140
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 24 tcgcttggtgcaggtcggga 43
||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcggga 20
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 129 tcccgccttgcatcaactga 148
||||||||||||||||||||
Sbjct: 121 tcccgccttgcatcaactga 140
>54374_pts-miR168a:pmrd
Length = 118
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 24 tcgcttggtgcaggtcggga 43
||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcggga 20
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 129 tcccgccttgcatcaactga 148
||||||||||||||||||||
Sbjct: 99 tcccgccttgcatcaactga 118
>54366_ptr-miR168:pmrd
Length = 118
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 24 tcgcttggtgcaggtcggga 43
||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcggga 20
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 129 tcccgccttgcatcaactga 148
||||||||||||||||||||
Sbjct: 99 tcccgccttgcatcaactga 118
>46959_ath-miR168m:pmrd
Length = 104
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 24 tcgcttggtgcaggtcggga 43
||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcggga 20
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 129 tcccgccttgcatcaactga 148
||||||||||||||||||||
Sbjct: 85 tcccgccttgcatcaactga 104
