miRNEST 2.0, an integrative microRNA resource :: BLAST
>54554_sly-miR171d:pmrd
Length = 112
Score = 137 bits (69), Expect = 2e-33
Identities = 88/93 (94%), Gaps = 1/93 (1%)
Strand = Plus / Plus
Query: 18 agaagcgatgttggtgaggttcaatccgaagacgagtttacgttttgttttcgtaaagaa 77
||||||||||||||||||||||||||||||||||| |||| | || |||||||||||||
Sbjct: 6 agaagcgatgttggtgaggttcaatccgaagacgaatttatgctta-ttttcgtaaagaa 64
Query: 78 cgatctcagattgagccgcgccaatatcacttc 110
|||||||||||||||||||||||||||||||||
Sbjct: 65 cgatctcagattgagccgcgccaatatcacttc 97
>54832_vvi-miR171e:pmrd
Length = 103
Score = 87.7 bits (44), Expect = 2e-18
Identities = 79/90 (87%), Gaps = 3/90 (3%)
Strand = Plus / Plus
Query: 20 aagcgatgttggtgaggttcaatccgaagacgagtttacgttttgttttcgtaaagaacg 79
|||||||||||||||||||||||||||||||| |||||| | |||||||||||
Sbjct: 8 aagcgatgttggtgaggttcaatccgaagacggatttacgaagagc---cgtaaagaacg 64
Query: 80 atctcagattgagccgcgccaatatcactt 109
||||| ||||||||||||||||||||||||
Sbjct: 65 atctctgattgagccgcgccaatatcactt 94
>48497_ghr-miR171:pmrd
Length = 85
Score = 85.7 bits (43), Expect = 7e-18
Identities = 75/85 (88%), Gaps = 3/85 (3%)
Strand = Plus / Plus
Query: 24 gatgttggtgaggttcaatccgaagacgagtttacgttttgttt---tcgtaaagaacga 80
|||||||||||||||||||||||||||| |||||| ||| || ||||||| ||||
Sbjct: 1 gatgttggtgaggttcaatccgaagacggatttacgaattgattcagtcgtaaaatacga 60
Query: 81 tctcagattgagccgcgccaatatc 105
|||||||||||||||||||||||||
Sbjct: 61 tctcagattgagccgcgccaatatc 85
>52331_ptc-miRf10509-akr:pmrd
Length = 99
Score = 69.9 bits (35), Expect = 4e-13
Identities = 79/93 (84%), Gaps = 3/93 (3%)
Strand = Plus / Plus
Query: 20 aagcgatgttggtgaggttcaatccgaagacgagtttacgtttt---gttttcgtaaaga 76
|||||||||||||||||||||||||||||||| ||||| | || | |||||
Sbjct: 4 aagcgatgttggtgaggttcaatccgaagacggatttacacgtgaaagtaattgtaaaat 63
Query: 77 acgatctcagattgagccgcgccaatatcactt 109
|||||||||||||||||||||||||||||||||
Sbjct: 64 acgatctcagattgagccgcgccaatatcactt 96
>51686_ptc-miR171c:pmrd
Length = 104
Score = 69.9 bits (35), Expect = 4e-13
Identities = 79/93 (84%), Gaps = 3/93 (3%)
Strand = Plus / Plus
Query: 20 aagcgatgttggtgaggttcaatccgaagacgagtttacgtttt---gttttcgtaaaga 76
|||||||||||||||||||||||||||||||| ||||| | || | |||||
Sbjct: 7 aagcgatgttggtgaggttcaatccgaagacggatttacacgtgaaagtaattgtaaaat 66
Query: 77 acgatctcagattgagccgcgccaatatcactt 109
|||||||||||||||||||||||||||||||||
Sbjct: 67 acgatctcagattgagccgcgccaatatcactt 99
>52488_ptc-miRf10666-akr:pmrd
Length = 93
Score = 63.9 bits (32), Expect = 3e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 78 cgatctcagattgagccgcgccaatatcactt 109
||||||||||||||||||||||||||||||||
Sbjct: 60 cgatctcagattgagccgcgccaatatcactt 91
Score = 61.9 bits (31), Expect = 1e-10
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 20 aagcgatgttggtgaggttcaatccgaagac 50
|||||||||||||||||||||||||||||||
Sbjct: 3 aagcgatgttggtgaggttcaatccgaagac 33
>51687_ptc-miR171d:pmrd
Length = 100
Score = 63.9 bits (32), Expect = 3e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 78 cgatctcagattgagccgcgccaatatcactt 109
||||||||||||||||||||||||||||||||
Sbjct: 64 cgatctcagattgagccgcgccaatatcactt 95
Score = 61.9 bits (31), Expect = 1e-10
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 20 aagcgatgttggtgaggttcaatccgaagac 50
|||||||||||||||||||||||||||||||
Sbjct: 7 aagcgatgttggtgaggttcaatccgaagac 37
>54833_vvi-miR171f:pmrd
Length = 103
Score = 61.9 bits (31), Expect = 1e-10
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 79 gatctcagattgagccgcgccaatatcactt 109
|||||||||||||||||||||||||||||||
Sbjct: 64 gatctcagattgagccgcgccaatatcactt 94
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 20 aagcgatgttggtgaggttcaatccgaaga 49
|||||||||||||||||||||||| |||||
Sbjct: 8 aagcgatgttggtgaggttcaatctgaaga 37
>51383_ppt-miR171b:pmrd
Length = 92
Score = 56.0 bits (28), Expect = 7e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 82 ctcagattgagccgcgccaatatcacttcctt 113
|||||||||||||||||||||||||| |||||
Sbjct: 61 ctcagattgagccgcgccaatatcacatcctt 92
>51382_ppt-miR171a:pmrd
Length = 91
Score = 54.0 bits (27), Expect = 3e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 83 tcagattgagccgcgccaatatcacttcctt 113
||||||||||||||||||||||||| |||||
Sbjct: 61 tcagattgagccgcgccaatatcacatcctt 91
>54582_smo-miR171d:pmrd
Length = 103
Score = 50.1 bits (25), Expect = 4e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 81 tctcagattgagccgcgccaatatcacttcctt 113
||||| ||||||||||||||||||||| |||||
Sbjct: 65 tctcaaattgagccgcgccaatatcacatcctt 97
>54461_sbi-miR171j:pmrd
Length = 108
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 86 gattgagccgcgccaatatcacttc 110
|||||||||||||||||||||||||
Sbjct: 84 gattgagccgcgccaatatcacttc 108
>48895_osa-miR171a:pmrd
Length = 96
Score = 46.1 bits (23), Expect = 6e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 86 gattgagccgcgccaatatcacttcct 112
|||||||||||||||||||| ||||||
Sbjct: 68 gattgagccgcgccaatatctcttcct 94
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 21 agcgatgttggtgaggttcaatccga 46
|||||| |||||||||||||||||||
Sbjct: 7 agcgatattggtgaggttcaatccga 32
>54553_sly-miR171c:pmrd
Length = 121
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 86 gattgagccgcgccaatatcac 107
||||||||||||||||||||||
Sbjct: 79 gattgagccgcgccaatatcac 100
>54667_stu-miR171:pmrd
Length = 124
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 86 gattgagccgcgccaatatca 106
|||||||||||||||||||||
Sbjct: 2 gattgagccgcgccaatatca 22
>54666_stu-miR170:pmrd
Length = 124
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 86 gattgagccgcgccaatatca 106
|||||||||||||||||||||
Sbjct: 2 gattgagccgcgccaatatca 22
>55028_zma-miR171a:pmrd
Length = 99
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 86 gattgagccgcgccaatatc 105
||||||||||||||||||||
Sbjct: 80 gattgagccgcgccaatatc 99
>55027_zma-miR170p:pmrd
Length = 62
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 86 gattgagccgcgccaatatc 105
||||||||||||||||||||
Sbjct: 43 gattgagccgcgccaatatc 62
>54910_zel-miR171:pmrd
Length = 65
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 86 gattgagccgcgccaatatc 105
||||||||||||||||||||
Sbjct: 2 gattgagccgcgccaatatc 21
>54579_smo-miR171a:pmrd
Length = 135
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 85 agattgagccgcgccaatatcact 108
||||||||||| ||||||||||||
Sbjct: 102 agattgagccgtgccaatatcact 125
>54458_sbi-miR171g:pmrd
Length = 77
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 86 gattgagccgcgccaatatc 105
||||||||||||||||||||
Sbjct: 58 gattgagccgcgccaatatc 77
>54451_sbi-miR170:pmrd
Length = 55
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 86 gattgagccgcgccaatatc 105
||||||||||||||||||||
Sbjct: 36 gattgagccgcgccaatatc 55
>51694_ptc-miR171k:pmrd
Length = 78
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 86 gattgagccgcgccaatatc 105
||||||||||||||||||||
Sbjct: 59 gattgagccgcgccaatatc 78
>51342_ppd-miR170:pmrd
Length = 297
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 86 gattgagccgcgccaatatc 105
||||||||||||||||||||
Sbjct: 278 gattgagccgcgccaatatc 297
>48636_gra-miR171:pmrd
Length = 117
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 86 gattgagccgcgccaatatc 105
||||||||||||||||||||
Sbjct: 2 gattgagccgcgccaatatc 21
>48569_gma-miR171m:pmrd
Length = 172
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 86 gattgagccgcgccaatatc 105
||||||||||||||||||||
Sbjct: 153 gattgagccgcgccaatatc 172
>48484_gcl-miR171:pmrd
Length = 205
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 86 gattgagccgcgccaatatc 105
||||||||||||||||||||
Sbjct: 186 gattgagccgcgccaatatc 205
>48407_bra-miR171e:pmrd
Length = 119
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 86 gattgagccgcgccaatatc 105
||||||||||||||||||||
Sbjct: 85 gattgagccgcgccaatatc 104
>48369_bna-miR171g:pmrd
Length = 115
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 86 gattgagccgcgccaatatc 105
||||||||||||||||||||
Sbjct: 79 gattgagccgcgccaatatc 98
>48368_bna-miR171f:pmrd
Length = 119
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 86 gattgagccgcgccaatatc 105
||||||||||||||||||||
Sbjct: 85 gattgagccgcgccaatatc 104
>48313_bdi-miR171d:pmrd
Length = 107
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 86 gattgagccgcgccaatatc 105
||||||||||||||||||||
Sbjct: 82 gattgagccgcgccaatatc 101
>48311_bdi-miR171a:pmrd
Length = 120
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 86 gattgagccgcgccaatatc 105
||||||||||||||||||||
Sbjct: 51 gattgagccgcgccaatatc 70
>46982_ath-miR171o:pmrd
Length = 339
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 86 gattgagccgcgccaatatc 105
||||||||||||||||||||
Sbjct: 320 gattgagccgcgccaatatc 339
>46981_ath-miR171n:pmrd
Length = 461
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 86 gattgagccgcgccaatatc 105
||||||||||||||||||||
Sbjct: 2 gattgagccgcgccaatatc 21
>46980_ath-miR171m:pmrd
Length = 92
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 86 gattgagccgcgccaatatc 105
||||||||||||||||||||
Sbjct: 73 gattgagccgcgccaatatc 92
>46977_ath-miR171a:pmrd
Length = 123
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 86 gattgagccgcgccaatatc 105
||||||||||||||||||||
Sbjct: 89 gattgagccgcgccaatatc 108
>46976_ath-miR170n:pmrd
Length = 172
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 86 gattgagccgcgccaatatc 105
||||||||||||||||||||
Sbjct: 153 gattgagccgcgccaatatc 172
>46975_ath-miR170m:pmrd
Length = 92
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 86 gattgagccgcgccaatatc 105
||||||||||||||||||||
Sbjct: 73 gattgagccgcgccaatatc 92
>46853_ace-miR171c:pmrd
Length = 216
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 86 gattgagccgcgccaatatc 105
||||||||||||||||||||
Sbjct: 197 gattgagccgcgccaatatc 216
>46852_ace-miR171b:pmrd
Length = 215
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 86 gattgagccgcgccaatatc 105
||||||||||||||||||||
Sbjct: 196 gattgagccgcgccaatatc 215
>46851_ace-miR171a:pmrd
Length = 89
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 86 gattgagccgcgccaatatc 105
||||||||||||||||||||
Sbjct: 2 gattgagccgcgccaatatc 21
>46850_ace-miR170d:pmrd
Length = 215
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 86 gattgagccgcgccaatatc 105
||||||||||||||||||||
Sbjct: 196 gattgagccgcgccaatatc 215
>46849_ace-miR170c:pmrd
Length = 55
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 86 gattgagccgcgccaatatc 105
||||||||||||||||||||
Sbjct: 2 gattgagccgcgccaatatc 21
>46848_ace-miR170b:pmrd
Length = 76
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 86 gattgagccgcgccaatatc 105
||||||||||||||||||||
Sbjct: 57 gattgagccgcgccaatatc 76
>46847_ace-miR170a:pmrd
Length = 89
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 86 gattgagccgcgccaatatc 105
||||||||||||||||||||
Sbjct: 2 gattgagccgcgccaatatc 21
