miRNEST 2.0, an integrative microRNA resource :: BLAST
>54542_sly-miR162:pmrd
Length = 99
Score = 63.9 bits (32), Expect = 3e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 72 agcaacaggaatcggtcgataaacctctgcatccag 107
||||| ||||||||||||||||||||||||||||||
Sbjct: 64 agcaaaaggaatcggtcgataaacctctgcatccag 99
>54784_vvi-miR162:pmrd
Length = 103
Score = 60.0 bits (30), Expect = 4e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 80 gaatcggtcgataaacctctgcatccagcg 109
||||||||||||||||||||||||||||||
Sbjct: 66 gaatcggtcgataaacctctgcatccagcg 95
Score = 46.1 bits (23), Expect = 6e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 18 cactggaggcagcggttcatcgatctgttcc 48
||||||| |||||||||||||||||| ||||
Sbjct: 7 cactggatgcagcggttcatcgatctcttcc 37
>54948_zma-miR162b:pmrd
Length = 130
Score = 58.0 bits (29), Expect = 2e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 79 ggaatcggtcgataaacctctgcatccag 107
|||||||||||||||||||||||||||||
Sbjct: 102 ggaatcggtcgataaacctctgcatccag 130
>52498_ptc-miRf10676-akr:pmrd
Length = 101
Score = 58.0 bits (29), Expect = 2e-09
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 16 gacactggaggcagcggttcatcgatctgttcc 48
|||||||||||||||||||||||||||| ||||
Sbjct: 98 gacactggaggcagcggttcatcgatcttttcc 66
Score = 46.1 bits (23), Expect = 6e-06
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 74 caacaggaatcggtcgataaacctctgcatccagcgctt 112
||||| ||| || ||||||||||||||||||||| ||||
Sbjct: 40 caacacgaaccgatcgataaacctctgcatccagtgctt 2
>52497_ptc-miRf10675-akr:pmrd
Length = 105
Score = 58.0 bits (29), Expect = 2e-09
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 16 gacactggaggcagcggttcatcgatctgttcc 48
|||||||||||||||||||||||||||| ||||
Sbjct: 100 gacactggaggcagcggttcatcgatcttttcc 68
Score = 46.1 bits (23), Expect = 6e-06
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 74 caacaggaatcggtcgataaacctctgcatccagcgctt 112
||||| ||| || ||||||||||||||||||||| ||||
Sbjct: 42 caacacgaaccgatcgataaacctctgcatccagtgctt 4
>52400_ptc-miRf10578-akr:pmrd
Length = 103
Score = 58.0 bits (29), Expect = 2e-09
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 16 gacactggaggcagcggttcatcgatctgttcc 48
|||||||||||||||||||||||||||| ||||
Sbjct: 99 gacactggaggcagcggttcatcgatctcttcc 67
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 87 tcgataaacctctgcatccagcgctt 112
||||||||||||||||||||||||||
Sbjct: 28 tcgataaacctctgcatccagcgctt 3
>52399_ptc-miRf10577-akr:pmrd
Length = 103
Score = 58.0 bits (29), Expect = 2e-09
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 16 gacactggaggcagcggttcatcgatctgttcc 48
|||||||||||||||||||||||||||| ||||
Sbjct: 99 gacactggaggcagcggttcatcgatctcttcc 67
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 87 tcgataaacctctgcatccagcgctt 112
||||||||||||||||||||||||||
Sbjct: 28 tcgataaacctctgcatccagcgctt 3
>52244_ptc-miRf10422-akr:pmrd
Length = 105
Score = 58.0 bits (29), Expect = 2e-09
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 16 gacactggaggcagcggttcatcgatctgttcc 48
|||||||||||||||||||||||||||| ||||
Sbjct: 100 gacactggaggcagcggttcatcgatcttttcc 68
Score = 46.1 bits (23), Expect = 6e-06
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 74 caacaggaatcggtcgataaacctctgcatccagcgctt 112
||||| ||| || ||||||||||||||||||||| ||||
Sbjct: 42 caacacgaaccgatcgataaacctctgcatccagtgctt 4
>52243_ptc-miRf10421-akr:pmrd
Length = 101
Score = 58.0 bits (29), Expect = 2e-09
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 16 gacactggaggcagcggttcatcgatctgttcc 48
|||||||||||||||||||||||||||| ||||
Sbjct: 98 gacactggaggcagcggttcatcgatcttttcc 66
Score = 46.1 bits (23), Expect = 6e-06
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 74 caacaggaatcggtcgataaacctctgcatccagcgctt 112
||||| ||| || ||||||||||||||||||||| ||||
Sbjct: 40 caacacgaaccgatcgataaacctctgcatccagtgctt 2
>51618_ptc-miR162c:pmrd
Length = 107
Score = 58.0 bits (29), Expect = 2e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 16 gacactggaggcagcggttcatcgatctgttcc 48
|||||||||||||||||||||||||||| ||||
Sbjct: 7 gacactggaggcagcggttcatcgatcttttcc 39
Score = 46.1 bits (23), Expect = 6e-06
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 74 caacaggaatcggtcgataaacctctgcatccagcgctt 112
||||| ||| || ||||||||||||||||||||| ||||
Sbjct: 65 caacacgaaccgatcgataaacctctgcatccagtgctt 103
>51617_ptc-miR162b:pmrd
Length = 107
Score = 58.0 bits (29), Expect = 2e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 16 gacactggaggcagcggttcatcgatctgttcc 48
|||||||||||||||||||||||||||| ||||
Sbjct: 7 gacactggaggcagcggttcatcgatcttttcc 39
Score = 46.1 bits (23), Expect = 6e-06
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 74 caacaggaatcggtcgataaacctctgcatccagcgctt 112
||||| ||| || ||||||||||||||||||||| ||||
Sbjct: 65 caacacgaaccgatcgataaacctctgcatccagtgctt 103
>51616_ptc-miR162a:pmrd
Length = 107
Score = 58.0 bits (29), Expect = 2e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 16 gacactggaggcagcggttcatcgatctgttcc 48
|||||||||||||||||||||||||||| ||||
Sbjct: 7 gacactggaggcagcggttcatcgatctcttcc 39
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 87 tcgataaacctctgcatccagcgctt 112
||||||||||||||||||||||||||
Sbjct: 78 tcgataaacctctgcatccagcgctt 103
>48707_mtr-miR162d:pmrd
Length = 87
Score = 58.0 bits (29), Expect = 2e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 75 aacaggaatcggtcgataaacctctgcatccag 107
|||| ||||||||||||||||||||||||||||
Sbjct: 55 aacatgaatcggtcgataaacctctgcatccag 87
Score = 50.1 bits (25), Expect = 4e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 20 ctggaggcagcggttcatcgatctgttcc 48
||||| |||||||||||||||||||||||
Sbjct: 1 ctggatgcagcggttcatcgatctgttcc 29
>48493_ghr-miR162a:pmrd
Length = 148
Score = 58.0 bits (29), Expect = 2e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 16 gacactggaggcagcggttcatcgatctgttcc 48
|||||||||||||||||||||||||||| ||||
Sbjct: 20 gacactggaggcagcggttcatcgatctcttcc 52
Score = 54.0 bits (27), Expect = 3e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 80 gaatcggtcgataaacctctgcatccagcgc 110
|||||| ||||||||||||||||||||||||
Sbjct: 87 gaatcgatcgataaacctctgcatccagcgc 117
>48706_mtr-miR162c:pmrd
Length = 86
Score = 56.0 bits (28), Expect = 6e-09
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 75 aacaggaatcggtcgataaacctctgcatcca 106
|||| |||||||||||||||||||||||||||
Sbjct: 32 aacatgaatcggtcgataaacctctgcatcca 1
Score = 50.1 bits (25), Expect = 4e-07
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 20 ctggaggcagcggttcatcgatctgttcc 48
||||| |||||||||||||||||||||||
Sbjct: 86 ctggatgcagcggttcatcgatctgttcc 58
>48705_mtr-miR162b:pmrd
Length = 85
Score = 56.0 bits (28), Expect = 6e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 75 aacaggaatcggtcgataaacctctgcatcca 106
|||| |||||||||||||||||||||||||||
Sbjct: 54 aacatgaatcggtcgataaacctctgcatcca 85
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 21 tggaggcagcggttcatcgatctgttcc 48
|||| |||||||||||||||||||||||
Sbjct: 1 tggatgcagcggttcatcgatctgttcc 28
>48545_gma-miR162a:pmrd
Length = 102
Score = 56.0 bits (28), Expect = 6e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 80 gaatcggtcgataaacctctgcatccagcgct 111
|||||| |||||||||||||||||||||||||
Sbjct: 66 gaatcgatcgataaacctctgcatccagcgct 97
Score = 46.1 bits (23), Expect = 6e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 18 cactggaggcagcggttcatcgatctgttcc 48
||||||| |||||||||||||||||| ||||
Sbjct: 8 cactggatgcagcggttcatcgatctcttcc 38
>47354_ath-miRf10254-akr:pmrd
Length = 115
Score = 56.0 bits (28), Expect = 6e-09
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 80 gaatcggtcgataaacctctgcatccagcgct 111
|||||| |||||||||||||||||||||||||
Sbjct: 42 gaatcgatcgataaacctctgcatccagcgct 11
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 20 ctggaggcagcggttcatcgatc 42
|||||||||||||||||||||||
Sbjct: 102 ctggaggcagcggttcatcgatc 80
>46938_ath-miR162b:pmrd
Length = 111
Score = 56.0 bits (28), Expect = 6e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 80 gaatcggtcgataaacctctgcatccagcgct 111
|||||| |||||||||||||||||||||||||
Sbjct: 72 gaatcgatcgataaacctctgcatccagcgct 103
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 20 ctggaggcagcggttcatcgatc 42
|||||||||||||||||||||||
Sbjct: 12 ctggaggcagcggttcatcgatc 34
>54387_rco-miR162:pmrd
Length = 96
Score = 54.0 bits (27), Expect = 3e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 18 cactggaggcagcggttcatcgatctgttcc 48
|||||||||||||||||||||||||| ||||
Sbjct: 1 cactggaggcagcggttcatcgatctcttcc 31
Score = 50.1 bits (25), Expect = 4e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 80 gaatcggtcgataaacctctgcatccagc 108
|||||| ||||||||||||||||||||||
Sbjct: 68 gaatcgatcgataaacctctgcatccagc 96
>48423_cpa-miR162a:pmrd
Length = 109
Score = 54.0 bits (27), Expect = 3e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 18 cactggaggcagcggttcatcgatctgttcc 48
|||||||||||||||||||||||||| ||||
Sbjct: 11 cactggaggcagcggttcatcgatctcttcc 41
Score = 54.0 bits (27), Expect = 3e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 75 aacaggaatcggtcgataaacctctgcatccagcg 109
|||| |||||| |||||||||||||||||||||||
Sbjct: 68 aacatgaatcgatcgataaacctctgcatccagcg 102
>48834_osa-miR162a:pmrd
Length = 171
Score = 50.1 bits (25), Expect = 4e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 79 ggaatcggtcgataaacctctgcatccag 107
||||||| |||||||||||||||||||||
Sbjct: 135 ggaatcgatcgataaacctctgcatccag 163
>48685_lsa-miR162:pmrd
Length = 89
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 87 tcgataaacctctgcatccagcgct 111
|||||||||||||||||||||||||
Sbjct: 1 tcgataaacctctgcatccagcgct 25
>48546_gma-miR162m:pmrd
Length = 367
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 87 tcgataaacctctgcatccagcgct 111
|||||||||||||||||||||||||
Sbjct: 1 tcgataaacctctgcatccagcgct 25
>46937_ath-miR162a:pmrd
Length = 140
Score = 50.1 bits (25), Expect = 4e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 20 ctggaggcagcggttcatcgatctgttcc 48
|||||||||||||||||||||||| ||||
Sbjct: 25 ctggaggcagcggttcatcgatctcttcc 53
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 87 tcgataaacctctgcatccagcg 109
|||||||||||||||||||||||
Sbjct: 89 tcgataaacctctgcatccagcg 111
>48690_mdo-miR162:pmrd
Length = 88
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 80 gaatcggtcgataaacctctgcatccag 107
|||||||||||||||||| |||||||||
Sbjct: 61 gaatcggtcgataaacctttgcatccag 88
Score = 46.1 bits (23), Expect = 6e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 20 ctggaggcagcggttcatcgatctgtt 46
||||||||| |||||||||||||||||
Sbjct: 1 ctggaggcatcggttcatcgatctgtt 27
>48682_llu-miR162:pmrd
Length = 80
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 80 gaatcggtcgataaacctctgcatccag 107
|||||| |||||||||||||||||||||
Sbjct: 53 gaatcgatcgataaacctctgcatccag 80
>48836_osa-miR162m:pmrd
Length = 114
Score = 46.1 bits (23), Expect = 6e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 77 caggaatcggtcgataaacctctgcatccag 107
||||||||| ||||||| |||||||||||||
Sbjct: 84 caggaatcgatcgataagcctctgcatccag 114
>48835_osa-miR162b:pmrd
Length = 134
Score = 46.1 bits (23), Expect = 6e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 77 caggaatcggtcgataaacctctgcatccag 107
||||||||| ||||||| |||||||||||||
Sbjct: 94 caggaatcgatcgataagcctctgcatccag 124
