miRNEST 2.0, an integrative microRNA resource :: BLAST
>54780_vvi-miR160c:pmrd
Length = 106
Score = 56.0 bits (28), Expect = 5e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 76 gggtggcgtgcgaggagccaagcatacc 103
||||||||||||||||||||||||||||
Sbjct: 71 gggtggcgtgcgaggagccaagcatacc 98
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 9 ttgtgcctggctccctgcatgccacacg 36
||||||||||||||||| ||||||||||
Sbjct: 8 ttgtgcctggctccctgtatgccacacg 35
>48791_oba-miR160:pmrd
Length = 90
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 76 gggtggcgtgcgaggagccaagcatac 102
|||||||||||||||||||||||||||
Sbjct: 64 gggtggcgtgcgaggagccaagcatac 90
Score = 42.1 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 9 ttgtgcctggctccctgcatgccac 33
||||||||||||||||| |||||||
Sbjct: 1 ttgtgcctggctccctgtatgccac 25
>53874_ptc-miRf12052-akr:pmrd
Length = 110
Score = 52.0 bits (26), Expect = 9e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 77 ggtggcgtgcgaggagccaagcatac 102
||||||||||||||||||||||||||
Sbjct: 74 ggtggcgtgcgaggagccaagcatac 99
>51611_ptc-miR160d:pmrd
Length = 103
Score = 52.0 bits (26), Expect = 9e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 77 ggtggcgtgcgaggagccaagcatac 102
||||||||||||||||||||||||||
Sbjct: 73 ggtggcgtgcgaggagccaagcatac 98
>51608_ptc-miR160a:pmrd
Length = 102
Score = 52.0 bits (26), Expect = 9e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 77 ggtggcgtgcgaggagccaagcatac 102
||||||||||||||||||||||||||
Sbjct: 72 ggtggcgtgcgaggagccaagcatac 97
>54939_zma-miR160b:pmrd
Length = 121
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 74 gtgggtggcgtgcgaggagccaagcat 100
||||||||||||| |||||||||||||
Sbjct: 76 gtgggtggcgtgcaaggagccaagcat 102
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 10 tgtgcctggctccctgcatgccacac 35
|||||||||||||||| |||||||||
Sbjct: 19 tgtgcctggctccctgtatgccacac 44
>51615_ptc-miR160h:pmrd
Length = 98
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 10 tgtgcctggctccctgcatgcca 32
|||||||||||||||||||||||
Sbjct: 9 tgtgcctggctccctgcatgcca 31
>48827_osa-miR160b:pmrd
Length = 139
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 74 gtgggtggcgtgcgaggagccaagcat 100
||||||||||||| |||||||||||||
Sbjct: 86 gtgggtggcgtgcaaggagccaagcat 112
>54947_zma-miR160m:pmrd
Length = 81
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 74 gtgggtggcgtgcgaggagccaagca 99
||||||||||||| ||||||||||||
Sbjct: 56 gtgggtggcgtgcaaggagccaagca 81
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgcatgccacac 35
|||||||||||||| |||||||||
Sbjct: 1 tgcctggctccctgtatgccacac 24
>54675_tae-miR160:pmrd
Length = 148
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 79 tggcgtgcgaggagccaagcat 100
||||||||||||||||||||||
Sbjct: 91 tggcgtgcgaggagccaagcat 112
>54405_sbi-miR160b:pmrd
Length = 82
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 74 gtgggtggcgtgcgaggagccaagca 99
||||||||||||| ||||||||||||
Sbjct: 57 gtgggtggcgtgcaaggagccaagca 82
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgcatgccacac 35
|||||||||||||| |||||||||
Sbjct: 1 tgcctggctccctgtatgccacac 24
>48833_osa-miR160n:pmrd
Length = 131
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 79 tggcgtgcgaggagccaagcat 100
||||||||||||||||||||||
Sbjct: 110 tggcgtgcgaggagccaagcat 131
>48832_osa-miR160m:pmrd
Length = 82
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 74 gtgggtggcgtgcgaggagccaagca 99
||||||||||||| ||||||||||||
Sbjct: 57 gtgggtggcgtgcaaggagccaagca 82
>48829_osa-miR160d:pmrd
Length = 142
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 79 tggcgtgcgaggagccaagcat 100
||||||||||||||||||||||
Sbjct: 117 tggcgtgcgaggagccaagcat 138
>48826_osa-miR160a:pmrd
Length = 88
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 10 tgtgcctggctccctgcatgccacac 35
|||||||||||||||| |||||||||
Sbjct: 2 tgtgcctggctccctgtatgccacac 27
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 75 tgggtggcgtgcgaggagccaagcat 100
|||||||||||| |||||||||||||
Sbjct: 61 tgggtggcgtgcaaggagccaagcat 86
>54938_zma-miR160a:pmrd
Length = 104
Score = 42.1 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 11 gtgcctggctccctgcatgccacac 35
||||||||||||||| |||||||||
Sbjct: 9 gtgcctggctccctgtatgccacac 33
>54407_sbi-miR160d:pmrd
Length = 100
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 79 tggcgtgcgaggagccaagca 99
|||||||||||||||||||||
Sbjct: 80 tggcgtgcgaggagccaagca 100
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgcatgccacacgctt 39
|||||||||||||| ||||||| |||||
Sbjct: 1 tgcctggctccctgtatgccactcgctt 28
>51361_ppt-miR160c:pmrd
Length = 100
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 13 gcctggctccctgcatgccac 33
|||||||||||||||||||||
Sbjct: 12 gcctggctccctgcatgccac 32
>54945_zma-miR160h:pmrd
Length = 86
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgcatgccacac 35
|||||||||||||| |||||||||
Sbjct: 1 tgcctggctccctgtatgccacac 24
>54944_zma-miR160g:pmrd
Length = 86
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgcatgccacac 35
|||||||||||||| |||||||||
Sbjct: 1 tgcctggctccctgtatgccacac 24
>54940_zma-miR160c:pmrd
Length = 100
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 10 tgtgcctggctccctgcatgccac 33
|||||||||||||||| |||||||
Sbjct: 5 tgtgcctggctccctgtatgccac 28
>54404_sbi-miR160a:pmrd
Length = 84
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgcatgccacac 35
|||||||||||||| |||||||||
Sbjct: 1 tgcctggctccctgtatgccacac 24
>48828_osa-miR160c:pmrd
Length = 99
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 10 tgtgcctggctccctgcatgccac 33
|||||||||||||||| |||||||
Sbjct: 5 tgtgcctggctccctgtatgccac 28
>47338_ath-miRf10238-akr:pmrd
Length = 89
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 11 gtgcctggctccctgcatgccaca 34
||||||||||||||| ||||||||
Sbjct: 4 gtgcctggctccctgtatgccaca 27
>46935_ath-miR160b:pmrd
Length = 89
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 11 gtgcctggctccctgcatgccaca 34
||||||||||||||| ||||||||
Sbjct: 4 gtgcctggctccctgtatgccaca 27
>46865_aqc-miR160b:pmrd
Length = 82
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 74 gtgggtggcgtgcgaggagccaagcata 101
|||| ||||||||||||||||| |||||
Sbjct: 55 gtggatggcgtgcgaggagccatgcata 82
