miRNEST 2.0, an integrative microRNA resource :: BLAST
>51723_ptc-miR393d:pmrd
Length = 107
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 4 tggagtattccaaagggatcgcattgatc 32
|||||| ||||||||||||||||||||||
Sbjct: 3 tggagtgttccaaagggatcgcattgatc 31
>51722_ptc-miR393c:pmrd
Length = 107
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 4 tggagtattccaaagggatcgcattgatc 32
|||||| ||||||||||||||||||||||
Sbjct: 3 tggagtgttccaaagggatcgcattgatc 31
>55056_zma-miR393:pmrd
Length = 126
Score = 48.1 bits (24), Expect = 1e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 1 tggtggagtattccaaagggatcgcattgatc 32
|||||||| | |||||||||||||||||||||
Sbjct: 10 tggtggaggactccaaagggatcgcattgatc 41
>54849_vvi-miR393a:pmrd
Length = 126
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 11 ttccaaagggatcgcattgatcc 33
|||||||||||||||||||||||
Sbjct: 10 ttccaaagggatcgcattgatcc 32
>48917_osa-miR393:pmrd
Length = 115
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 12 tccaaagggatcgcattgatcct 34
|||||||||||||||||||||||
Sbjct: 11 tccaaagggatcgcattgatcct 33
>48730_mtr-miR393:pmrd
Length = 135
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 12 tccaaagggatcgcattgatcct 34
|||||||||||||||||||||||
Sbjct: 21 tccaaagggatcgcattgatcct 43
>48373_bna-miR393:pmrd
Length = 127
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 12 tccaaagggatcgcattgatcct 34
|||||||||||||||||||||||
Sbjct: 1 tccaaagggatcgcattgatcct 23
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 57 ggatcatgcgatctcttcgga 77
|||||||||||||||||||||
Sbjct: 107 ggatcatgcgatctcttcgga 127
>47287_ath-miRf10187-akr:pmrd
Length = 162
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 12 tccaaagggatcgcattgatcct 34
|||||||||||||||||||||||
Sbjct: 12 tccaaagggatcgcattgatcct 34
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 57 ggatcatgcgatctcttcggatt 79
||||||||||||||||| |||||
Sbjct: 131 ggatcatgcgatctctttggatt 153
>47214_ath-miRf10114-akr:pmrd
Length = 131
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 12 tccaaagggatcgcattgatcct 34
|||||||||||||||||||||||
Sbjct: 10 tccaaagggatcgcattgatcct 32
>46999_ath-miR393b:pmrd
Length = 160
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 12 tccaaagggatcgcattgatcct 34
|||||||||||||||||||||||
Sbjct: 11 tccaaagggatcgcattgatcct 33
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 57 ggatcatgcgatctcttcggatt 79
||||||||||||||||| |||||
Sbjct: 130 ggatcatgcgatctctttggatt 152
>46998_ath-miR393a:pmrd
Length = 133
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 12 tccaaagggatcgcattgatcct 34
|||||||||||||||||||||||
Sbjct: 11 tccaaagggatcgcattgatcct 33
>55062_zma-miR393f:pmrd
Length = 104
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 12 tccaaagggatcgcattgatcc 33
||||||||||||||||||||||
Sbjct: 1 tccaaagggatcgcattgatcc 22
>55057_zma-miR393a:pmrd
Length = 104
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 12 tccaaagggatcgcattgatcc 33
||||||||||||||||||||||
Sbjct: 1 tccaaagggatcgcattgatcc 22
>54850_vvi-miR393b:pmrd
Length = 83
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 12 tccaaagggatcgcattgatcc 33
||||||||||||||||||||||
Sbjct: 11 tccaaagggatcgcattgatcc 32
>54470_sbi-miR393:pmrd
Length = 139
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 12 tccaaagggatcgcattgatcc 33
||||||||||||||||||||||
Sbjct: 21 tccaaagggatcgcattgatcc 42
>53841_ptc-miRf12019-akr:pmrd
Length = 98
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 12 tccaaagggatcgcattgatcc 33
||||||||||||||||||||||
Sbjct: 17 tccaaagggatcgcattgatcc 38
>53840_ptc-miRf12018-akr:pmrd
Length = 92
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 12 tccaaagggatcgcattgatcc 33
||||||||||||||||||||||
Sbjct: 14 tccaaagggatcgcattgatcc 35
>52949_ptc-miRf11127-akr:pmrd
Length = 93
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 12 tccaaagggatcgcattgatcc 33
||||||||||||||||||||||
Sbjct: 14 tccaaagggatcgcattgatcc 35
>52948_ptc-miRf11126-akr:pmrd
Length = 93
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 12 tccaaagggatcgcattgatcc 33
||||||||||||||||||||||
Sbjct: 14 tccaaagggatcgcattgatcc 35
>52374_ptc-miRf10552-akr:pmrd
Length = 92
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 12 tccaaagggatcgcattgatcc 33
||||||||||||||||||||||
Sbjct: 14 tccaaagggatcgcattgatcc 35
>51972_ptc-miRf10150-akr:pmrd
Length = 98
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 12 tccaaagggatcgcattgatcc 33
||||||||||||||||||||||
Sbjct: 82 tccaaagggatcgcattgatcc 61
>51950_ptc-miRf10128-akr:pmrd
Length = 99
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 12 tccaaagggatcgcattgatcc 33
||||||||||||||||||||||
Sbjct: 17 tccaaagggatcgcattgatcc 38
>51721_ptc-miR393b:pmrd
Length = 84
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 12 tccaaagggatcgcattgatcc 33
||||||||||||||||||||||
Sbjct: 11 tccaaagggatcgcattgatcc 32
>51720_ptc-miR393a:pmrd
Length = 85
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 12 tccaaagggatcgcattgatcc 33
||||||||||||||||||||||
Sbjct: 11 tccaaagggatcgcattgatcc 32
>48919_osa-miR393b:pmrd
Length = 132
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 3 gtggagtattccaaagggatcgcattgatc 32
|||||| | |||||||||||||||||||||
Sbjct: 18 gtggaggactccaaagggatcgcattgatc 47
>48918_osa-miR393b:pmrd
Length = 132
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 3 gtggagtattccaaagggatcgcattgatc 32
|||||| | |||||||||||||||||||||
Sbjct: 18 gtggaggactccaaagggatcgcattgatc 47
>48731_mtr-miR393b:pmrd
Length = 119
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 12 tccaaagggatcgcattgatcc 33
||||||||||||||||||||||
Sbjct: 6 tccaaagggatcgcattgatcc 27
>48576_gma-miR393:pmrd
Length = 120
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 12 tccaaagggatcgcattgatcc 33
||||||||||||||||||||||
Sbjct: 11 tccaaagggatcgcattgatcc 32
>55063_zma-miR393g:pmrd
Length = 87
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tccaaagggatcgcattgatc 32
|||||||||||||||||||||
Sbjct: 1 tccaaagggatcgcattgatc 21
>55061_zma-miR393e:pmrd
Length = 89
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 12 tccaaagggatcgcattgatc 32
|||||||||||||||||||||
Sbjct: 87 tccaaagggatcgcattgatc 67
>55060_zma-miR393d:pmrd
Length = 91
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 12 tccaaagggatcgcattgatc 32
|||||||||||||||||||||
Sbjct: 89 tccaaagggatcgcattgatc 69
>55059_zma-miR393c:pmrd
Length = 89
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tccaaagggatcgcattgatc 32
|||||||||||||||||||||
Sbjct: 3 tccaaagggatcgcattgatc 23
>55058_zma-miR393b:pmrd
Length = 91
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tccaaagggatcgcattgatc 32
|||||||||||||||||||||
Sbjct: 3 tccaaagggatcgcattgatc 23
>48501_ghr-miR393:pmrd
Length = 119
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tccaaagggatcgcattgatc 32
|||||||||||||||||||||
Sbjct: 1 tccaaagggatcgcattgatc 21
