miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>49401_osa-miRf10186-akr:pmrd
Length = 61
Score = 56.0 bits (28), Expect = 6e-09
Identities = 47/52 (90%), Gaps = 1/52 (1%)
Strand = Plus / Minus
Query: 35 cattgacatgtgggccatatc-aaagtagggcccatatatcagtggcacaac 85
||||||||||||||||||||| ||| |||| |||| || |||||||||||||
Sbjct: 53 cattgacatgtgggccatatcaaaaataggacccacatgtcagtggcacaac 2
>50890_osa-miRf11675-akr:pmrd
Length = 68
Score = 54.0 bits (27), Expect = 2e-08
Identities = 48/55 (87%)
Strand = Plus / Plus
Query: 33 gtcattgacatgtgggccatatcaaagtagggcccatatatcagtggcacaactg 87
|||| |||| ||||||||||| ||||||||| |||| ||||||||| | ||||||
Sbjct: 11 gtcactgacgtgtgggccatagcaaagtaggacccacatatcagtgactcaactg 65
>50419_osa-miRf11204-akr:pmrd
Length = 130
Score = 52.0 bits (26), Expect = 9e-08
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 74 cagtggcacaactgtagactgcacaaagtcagggatct 111
|||||||| ||||| | |||||||||||||||||||||
Sbjct: 44 cagtggcataactgcaaactgcacaaagtcagggatct 7
Score = 44.1 bits (22), Expect = 2e-05
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 74 cagtggcacaactgtagactgcacaaagtcaggg 107
|||||||| ||||| | |||||||||||||||||
Sbjct: 85 cagtggcataactgcaaactgcacaaagtcaggg 118
>50209_osa-miRf10994-akr:pmrd
Length = 63
Score = 42.1 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 63 ggcccatatatcagtggcacaactg 87
|||||| ||||||||||||||||||
Sbjct: 39 ggcccacatatcagtggcacaactg 63
