miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>49004_osa-miR442:pmrd
          Length = 233

 Score = 65.9 bits (33), Expect = 9e-12
 Identities = 69/81 (85%)
 Strand = Plus / Plus

                                                                       
Query: 80  gctacagtaaacaacctctaatgacagattaattaggctcattacattcgtctcgcgatt 139
           |||||||||||||    |||||||| ||||||||||||| | || |||||||||||  ||
Sbjct: 114 gctacagtaaacatttgctaatgacggattaattaggcttaataaattcgtctcgcagtt 173

                                
Query: 140 tacagacgagttctgtaattt 160
           ||||||||  |||||||||||
Sbjct: 174 tacagacggattctgtaattt 194




>50895_osa-miRf11680-akr:pmrd
          Length = 145

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 42/48 (87%)
 Strand = Plus / Plus

                                                           
Query: 97  ctaatgacagattaattaggctcattacattcgtctcgcgatttacag 144
           |||||||  ||||||||||||| | || |||||||||||| |||||||
Sbjct: 86  ctaatgatggattaattaggcttaataaattcgtctcgcggtttacag 133




>50021_osa-miRf10806-akr:pmrd
          Length = 123

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                   
Query: 97  ctaatgacagattaattaggctcattacattcgtctcgcg 136
           |||||||| |||||||||||||||  | ||||||||||||
Sbjct: 46  ctaatgacggattaattaggctcaaaagattcgtctcgcg 7




>50516_osa-miRf11301-akr:pmrd
          Length = 139

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                           
Query: 26 aaatcgcgagacgaatctaatgaacctaattag 58
          ||||||||||||||||||  ||| |||||||||
Sbjct: 74 aaatcgcgagacgaatcttttgagcctaattag 42



 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 109 taattaggctcattacattcgtctcgcgattt 140
           ||||||||||||  | ||||||||||||||||
Sbjct: 43  taattaggctcaaaagattcgtctcgcgattt 74




>51249_osa-miRf12034-akr:pmrd
          Length = 121

 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 97  ctaatgacagattaattaggctca 120
           |||||||| |||||||||||||||
Sbjct: 76  ctaatgacggattaattaggctca 99




>51205_osa-miRf11990-akr:pmrd
          Length = 135

 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 106 gattaattaggctcattacattcgtctcgcga 137
           ||||||||||||||| || ||| |||||||||
Sbjct: 40  gattaattaggctcaatagatttgtctcgcga 9




>51000_osa-miRf11785-akr:pmrd
          Length = 128

 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                               
Query: 23  tgtaaatcgcgagacgaatctaatgaacctaattag 58
           ||||||||||||||| |||||  ||| |||||||||
Sbjct: 125 tgtaaatcgcgagacaaatcttttgagcctaattag 90




>49733_osa-miRf10518-akr:pmrd
          Length = 122

 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 97  ctaatgacagattaattaggctcattacattcgtctcgcg 136
           |||||||| | |||||||||||||  | ||||||||||||
Sbjct: 47  ctaatgacggcttaattaggctcaaaagattcgtctcgcg 8




>49455_osa-miRf10240-akr:pmrd
          Length = 128

 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                   
Query: 97  ctaatgacagattaattaggctcattacattcgtctcgcg 136
           ||||| || |||||||||||||||  | ||||||||||||
Sbjct: 79  ctaataacggattaattaggctcaaaagattcgtctcgcg 118