miRNEST 2.0, an integrative microRNA resource :: BLAST
>49004_osa-miR442:pmrd
Length = 233
Score = 99.6 bits (50), Expect = 1e-21
Identities = 93/106 (87%), Gaps = 1/106 (0%)
Strand = Plus / Plus
Query: 96 ttgcgagacgaatcttt-aactctaattagtgcatgatttgacaatatgatgctacagta 154
||||||||||||||||| || |||||| | |||||| ||||||| || ||||||||||
Sbjct: 63 ttgcgagacgaatcttttaagcctaattgctccatgatctgacaatgtggtgctacagta 122
Query: 155 aatatgtgctaatgatggattaattaggcttaatagattcgtctcg 200
|| || ||||||||| ||||||||||||||||||| ||||||||||
Sbjct: 123 aacatttgctaatgacggattaattaggcttaataaattcgtctcg 168
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 176 aattaggcttaatagattcgtctcg 200
|||||||||||| ||||||||||||
Sbjct: 90 aattaggcttaaaagattcgtctcg 66
>50895_osa-miRf11680-akr:pmrd
Length = 145
Score = 91.7 bits (46), Expect = 3e-19
Identities = 64/70 (91%)
Strand = Plus / Plus
Query: 131 atttgacaatatgatgctacagtaaatatgtgctaatgatggattaattaggcttaatag 190
|||||||||| || ||||| |||||| || |||||||||||||||||||||||||||||
Sbjct: 54 atttgacaatgtggtgctaaagtaaacatttgctaatgatggattaattaggcttaataa 113
Query: 191 attcgtctcg 200
||||||||||
Sbjct: 114 attcgtctcg 123
>49008_osa-miR445a:pmrd
Length = 268
Score = 89.7 bits (45), Expect = 1e-18
Identities = 97/113 (85%), Gaps = 1/113 (0%)
Strand = Plus / Minus
Query: 89 gactaatttgcgagacgaatcttta-actctaattagtgcatgatttgacaatatgatgc 147
|||||||| ||||||||||||||| | |||||||| |||||||||||||| ||||||
Sbjct: 195 gactaattcgcgagacgaatcttttgagtctaattacaccatgatttgacaatgtgatgc 136
Query: 148 tacagtaaatatgtgctaatgatggattaattaggcttaatagattcgtctcg 200
||||||||| | | |||| ||||||||||||||||||| | ||||||||||
Sbjct: 135 tacagtaaacttttcataattatggattaattaggcttaaaaaattcgtctcg 83
Score = 46.1 bits (23), Expect = 2e-05
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 47 tattaaacatagactaattacaaaactaatt 77
|||||||||||||||||| | ||||||||||
Sbjct: 31 tattaaacatagactaataaaaaaactaatt 61
>50021_osa-miRf10806-akr:pmrd
Length = 123
Score = 61.9 bits (31), Expect = 3e-10
Identities = 40/43 (93%)
Strand = Plus / Minus
Query: 158 atgtgctaatgatggattaattaggcttaatagattcgtctcg 200
|||||||||||| |||||||||||||| || ||||||||||||
Sbjct: 51 atgtgctaatgacggattaattaggctcaaaagattcgtctcg 9
Score = 44.1 bits (22), Expect = 6e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 175 taattaggcttaatagattcgtctcg 200
||||||||||||| ||||||||||||
Sbjct: 90 taattaggcttaaaagattcgtctcg 115
>49011_osa-miR445d:pmrd
Length = 312
Score = 60.0 bits (30), Expect = 1e-09
Identities = 42/46 (91%)
Strand = Plus / Plus
Query: 142 tgatgctacagtaaatatgtgctaatgatggattaattaggcttaa 187
|||||||||| |||| ||||| |||| |||||||||||||||||||
Sbjct: 148 tgatgctacactaaacatgtgttaattatggattaattaggcttaa 193
Score = 46.1 bits (23), Expect = 2e-05
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 46 atattaaacatagactaattacaaaactaat 76
|||||||||||| |||| |||||||||||||
Sbjct: 262 atattaaacataaactacttacaaaactaat 232
>49010_osa-miR445c:pmrd
Length = 260
Score = 60.0 bits (30), Expect = 1e-09
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 175 taattaggcttaatagattcgtctcgtgaattag 208
||||||||||||| ||||||||||||||||||||
Sbjct: 148 taattaggcttaaaagattcgtctcgtgaattag 181
Score = 50.1 bits (25), Expect = 1e-06
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 164 taatgatggattaattaggcttaatagattcgtctcg 200
|||| ||||||||||||||||||| | ||||||||||
Sbjct: 124 taattatggattaattaggcttaaaaaattcgtctcg 88
Score = 46.1 bits (23), Expect = 2e-05
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 47 tattaaacatagactaattacaaaactaatt 77
|||||||||||||||||| | ||||||||||
Sbjct: 36 tattaaacatagactaataaaaaaactaatt 66
>51205_osa-miRf11990-akr:pmrd
Length = 135
Score = 58.0 bits (29), Expect = 4e-09
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 164 taatgatggattaattaggcttaatagattcgtctcgtgaattag 208
|||| |||||||||||||||| |||||||| |||||| |||||||
Sbjct: 48 taatcatggattaattaggctcaatagatttgtctcgcgaattag 4
>51249_osa-miRf12034-akr:pmrd
Length = 121
Score = 56.0 bits (28), Expect = 2e-08
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 157 tatgtgctaatgatggattaattaggcttaatagattcgtctcg 200
||||||||||||| |||||||||||||| || |||||| |||||
Sbjct: 70 tatgtgctaatgacggattaattaggctcaagagattcatctcg 113
>49455_osa-miRf10240-akr:pmrd
Length = 128
Score = 54.0 bits (27), Expect = 6e-08
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 158 atgtgctaatgatggattaattaggcttaatagattcgtctcg 200
|||||||||| | |||||||||||||| || ||||||||||||
Sbjct: 74 atgtgctaataacggattaattaggctcaaaagattcgtctcg 116
>51304_osa-miRf12089-akr:pmrd
Length = 120
Score = 52.0 bits (26), Expect = 3e-07
Identities = 41/46 (89%)
Strand = Plus / Minus
Query: 158 atgtgctaatgatggattaattaggcttaatagattcgtctcgtga 203
|||||||||||| | |||||||||||| || |||||||||| ||||
Sbjct: 51 atgtgctaatgacgaattaattaggctcaaaagattcgtcttgtga 6
>49652_osa-miRf10437-akr:pmrd
Length = 120
Score = 52.0 bits (26), Expect = 3e-07
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 163 ctaatgatggattaattaggcttaatagattcgtctcg 200
|||||||||||||||||| ||| || ||||||||||||
Sbjct: 75 ctaatgatggattaattatgctcaaaagattcgtctcg 112
>49015_osa-miR445h:pmrd
Length = 277
Score = 50.1 bits (25), Expect = 1e-06
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 164 taatgatggattaattaggcttaatagattcgtctcg 200
|||| ||||||||||||||||||| | ||||||||||
Sbjct: 132 taattatggattaattaggcttaaaaaattcgtctcg 96
Score = 46.1 bits (23), Expect = 2e-05
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 47 tattaaacatagactaattacaaaactaatt 77
|||||||||||||||||| | ||||||||||
Sbjct: 44 tattaaacatagactaataaaaaaactaatt 74
Score = 40.1 bits (20), Expect = 0.001
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 89 gactaatttgcgagacgaatcttt 112
|||||||| |||||||||||||||
Sbjct: 191 gactaattcgcgagacgaatcttt 168
>49014_osa-miR445g:pmrd
Length = 275
Score = 50.1 bits (25), Expect = 1e-06
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 164 taatgatggattaattaggcttaatagattcgtctcg 200
|||| ||||||||||||||||||| | ||||||||||
Sbjct: 131 taattatggattaattaggcttaaaaaattcgtctcg 95
Score = 46.1 bits (23), Expect = 2e-05
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 47 tattaaacatagactaattacaaaactaatt 77
|||||||||||||||||| | ||||||||||
Sbjct: 43 tattaaacatagactaataaaaaaactaatt 73
Score = 42.1 bits (21), Expect = 2e-04
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 44 gaatattaaacatagactaattacaaaac 72
|||||||||||||| |||||||| |||||
Sbjct: 235 gaatattaaacatacactaattataaaac 207
>49012_osa-miR445e:pmrd
Length = 265
Score = 50.1 bits (25), Expect = 1e-06
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 164 taatgatggattaattaggcttaatagattcgtctcg 200
|||| ||||||||||||||||||| | ||||||||||
Sbjct: 126 taattatggattaattaggcttaaaaaattcgtctcg 90
Score = 46.1 bits (23), Expect = 2e-05
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 47 tattaaacatagactaattacaaaactaatt 77
|||||||||||||||||| | ||||||||||
Sbjct: 38 tattaaacatagactaataaaaaaactaatt 68
Score = 40.1 bits (20), Expect = 0.001
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 89 gactaatttgcgagacgaatcttt 112
|||||||| |||||||||||||||
Sbjct: 185 gactaattcgcgagacgaatcttt 162
>51000_osa-miRf11785-akr:pmrd
Length = 128
Score = 46.1 bits (23), Expect = 2e-05
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 158 atgtgctaatgatggattaattaggcttaatagattcgtctcg 200
||||| |||||| || ||||||||||| || ||||||||||||
Sbjct: 55 atgtgttaatgacggcttaattaggctcaaaagattcgtctcg 13
>50149_osa-miRf10934-akr:pmrd
Length = 143
Score = 46.1 bits (23), Expect = 2e-05
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 148 tacagtaaatatgtgctaatgatggattaattaggcttaatagattc 194
|||| |||| || ||||||||| ||||||||||||||| ||| ||||
Sbjct: 70 tacaataaacatttgctaatgacggattaattaggcttcataaattc 116
>49733_osa-miRf10518-akr:pmrd
Length = 122
Score = 46.1 bits (23), Expect = 2e-05
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 158 atgtgctaatgatggattaattaggcttaatagattcgtctcg 200
|||| ||||||| || ||||||||||| || ||||||||||||
Sbjct: 52 atgtactaatgacggcttaattaggctcaaaagattcgtctcg 10
>49013_osa-miR445f:pmrd
Length = 305
Score = 46.1 bits (23), Expect = 2e-05
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 47 tattaaacatagactaattacaaaactaatt 77
|||||||||||||||||| | ||||||||||
Sbjct: 59 tattaaacatagactaataaaaaaactaatt 89
Score = 44.1 bits (22), Expect = 6e-05
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 164 taatgatggattaattaggcttaatagattcgtc 197
|||| ||||||||||||||||||| | |||||||
Sbjct: 147 taattatggattaattaggcttaaaaaattcgtc 114
Score = 40.1 bits (20), Expect = 0.001
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 89 gactaatttgcgagacgaatcttt 112
|||||||| |||||||||||||||
Sbjct: 206 gactaattcgcgagacgaatcttt 183
>49009_osa-miR445b:pmrd
Length = 264
Score = 42.1 bits (21), Expect = 2e-04
Identities = 33/37 (89%)
Strand = Plus / Minus
Query: 164 taatgatggattaattaggcttaatagattcgtctcg 200
|||| ||||||||||||||||||| | |||||||||
Sbjct: 125 taattatggattaattaggcttaaaaagttcgtctcg 89
Score = 40.1 bits (20), Expect = 0.001
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 89 gactaatttgcgagacgaatcttt 112
|||||||| |||||||||||||||
Sbjct: 184 gactaattcgcgagacgaatcttt 161
>49016_osa-miR445i:pmrd
Length = 244
Score = 40.1 bits (20), Expect = 0.001
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 164 taatgatggattaattaggcttaa 187
|||| |||||||||||||||||||
Sbjct: 133 taattatggattaattaggcttaa 110
Score = 40.1 bits (20), Expect = 0.001
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 89 gactaatttgcgagacgaatcttt 112
|||||||| |||||||||||||||
Sbjct: 157 gactaattcgcgagacgaatcttt 134
