miRNEST 2.0, an integrative microRNA resource :: BLAST
>48829_osa-miR160d:pmrd
Length = 142
Score = 85.7 bits (43), Expect = 8e-18
Identities = 43/43 (100%)
Strand = Plus / Plus
Query: 4 ggggatatgcctggctccctgtatgccactcgcgtagctgcca 46
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggggatatgcctggctccctgtatgccactcgcgtagctgcca 43
Score = 81.8 bits (41), Expect = 1e-16
Identities = 41/41 (100%)
Strand = Plus / Plus
Query: 99 tggctctactgcggatggcgtgcgaggagccaagcatgacc 139
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 102 tggctctactgcggatggcgtgcgaggagccaagcatgacc 142
>54675_tae-miR160:pmrd
Length = 148
Score = 83.8 bits (42), Expect = 3e-17
Identities = 42/42 (100%)
Strand = Plus / Plus
Query: 5 gggatatgcctggctccctgtatgccactcgcgtagctgcca 46
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16 gggatatgcctggctccctgtatgccactcgcgtagctgcca 57
Score = 73.8 bits (37), Expect = 3e-14
Identities = 40/41 (97%)
Strand = Plus / Plus
Query: 99 tggctctactgcggatggcgtgcgaggagccaagcatgacc 139
||||||||| |||||||||||||||||||||||||||||||
Sbjct: 76 tggctctaccgcggatggcgtgcgaggagccaagcatgacc 116
>48833_osa-miR160n:pmrd
Length = 131
Score = 73.8 bits (37), Expect = 3e-14
Identities = 37/37 (100%)
Strand = Plus / Plus
Query: 99 tggctctactgcggatggcgtgcgaggagccaagcat 135
|||||||||||||||||||||||||||||||||||||
Sbjct: 95 tggctctactgcggatggcgtgcgaggagccaagcat 131
Score = 71.9 bits (36), Expect = 1e-13
Identities = 36/36 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgccactcgcgtagctgcca 46
||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgccactcgcgtagctgcca 36
>54407_sbi-miR160d:pmrd
Length = 100
Score = 71.9 bits (36), Expect = 1e-13
Identities = 36/36 (100%)
Strand = Plus / Plus
Query: 99 tggctctactgcggatggcgtgcgaggagccaagca 134
||||||||||||||||||||||||||||||||||||
Sbjct: 65 tggctctactgcggatggcgtgcgaggagccaagca 100
Score = 63.9 bits (32), Expect = 3e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgccactcgcgtagctgcca 46
|||||||||||||||||||||||||| |||||||||
Sbjct: 1 tgcctggctccctgtatgccactcgcttagctgcca 36
>54941_zma-miR160d:pmrd
Length = 142
Score = 65.9 bits (33), Expect = 8e-12
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 99 tggctctactgcggatggcgtgcgaggagccaagcatgacc 139
|||||| ||||||||||||||||| ||||||||||||||||
Sbjct: 88 tggctccactgcggatggcgtgcgtggagccaagcatgacc 128
Score = 63.9 bits (32), Expect = 3e-11
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 7 gatatgcctggctccctgtatgccactcgcgtagctgcca 46
|||||||||||||||||||||||||||||| | |||||||
Sbjct: 17 gatatgcctggctccctgtatgccactcgcatggctgcca 56
>48830_osa-miR160e:pmrd
Length = 114
Score = 65.9 bits (33), Expect = 8e-12
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 2 taggggatatgcctggctccctgtatgccactcgcgtagctgcca 46
||||||||||||||||||||||||||||| ||||| | |||||||
Sbjct: 2 taggggatatgcctggctccctgtatgccgctcgcatggctgcca 46
>54942_zma-miR160e:pmrd
Length = 94
Score = 60.0 bits (30), Expect = 5e-10
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 3 aggggatatgcctggctccctgtatgccactcgc 36
|||| |||||||||||||||||||||||||||||
Sbjct: 1 agggaatatgcctggctccctgtatgccactcgc 34
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 107 ctgcggatggcgtgcgaggagccaagcatg 136
|||||| |||||||||||| ||||||||||
Sbjct: 59 ctgcggctggcgtgcgaggtgccaagcatg 88
>54946_zma-miR160i:pmrd
Length = 81
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 10 atgcctggctccctgtatgccactcgc 36
|||||||||||||||||||||||||||
Sbjct: 1 atgcctggctccctgtatgccactcgc 27
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 107 ctgcggatggcgtgcgaggagccaagcat 135
|||||| |||||||||||| |||||||||
Sbjct: 53 ctgcggctggcgtgcgaggtgccaagcat 81
>54943_zma-miR160f:pmrd
Length = 116
Score = 54.0 bits (27), Expect = 3e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 2 taggggatatgcctggctccctgtatgccactcgc 36
||||| ||||||||||||||||||||||| |||||
Sbjct: 12 tagggaatatgcctggctccctgtatgccgctcgc 46
>48658_hvv-miR160a:pmrd
Length = 344
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 5 gggatatgcctggctccctgtatgcca 31
|||||||||||||||||||||||||||
Sbjct: 318 gggatatgcctggctccctgtatgcca 344
>54408_sbi-miR160e:pmrd
Length = 95
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgccactcgc 36
||||||||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgccactcgc 26
Score = 40.1 bits (20), Expect = 4e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 107 ctgcggatggcgtgcgaggagccaagca 134
|||||| |||||||||||| ||||||||
Sbjct: 68 ctgcggctggcgtgcgaggtgccaagca 95
>54940_zma-miR160c:pmrd
Length = 100
Score = 50.1 bits (25), Expect = 5e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 6 ggatatgcctggctccctgtatgccactc 34
|||| ||||||||||||||||||||||||
Sbjct: 2 ggatgtgcctggctccctgtatgccactc 30
>48791_oba-miR160:pmrd
Length = 90
Score = 50.1 bits (25), Expect = 5e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 103 tctactgcggatggcgtgcgaggagccaagcat 135
||||| |||| ||||||||||||||||||||||
Sbjct: 56 tctacggcgggtggcgtgcgaggagccaagcat 88
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgccact 33
|||||||||||||||||||||||
Sbjct: 4 tgcctggctccctgtatgccact 26
>54783_vvi-miR160f:pmrd
Length = 102
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 8 atatgcctggctccctgtatgcca 31
||||||||||||||||||||||||
Sbjct: 8 atatgcctggctccctgtatgcca 31
>54781_vvi-miR160d:pmrd
Length = 102
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 109 gcggatggcgtgcgaggagccaagcatg 136
|||||||||||||||||||||| |||||
Sbjct: 65 gcggatggcgtgcgaggagccatgcatg 92
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 10 atgcctggctccctgtatgcca 31
||||||||||||||||||||||
Sbjct: 10 atgcctggctccctgtatgcca 31
>54780_vvi-miR160c:pmrd
Length = 106
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 108 tgcggatggcgtgcgaggagccaagcat 135
||||| ||||||||||||||||||||||
Sbjct: 68 tgcgggtggcgtgcgaggagccaagcat 95
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgccac 32
||||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgccac 32
>54759_ttu-miR160a:pmrd
Length = 87
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgccactc 34
||||||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgccactc 24
>54541_sly-miR160a:pmrd
Length = 129
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 8 atatgcctggctccctgtatgcca 31
||||||||||||||||||||||||
Sbjct: 17 atatgcctggctccctgtatgcca 40
>54406_sbi-miR160c:pmrd
Length = 83
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgccactc 34
||||||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgccactc 24
>53874_ptc-miRf12052-akr:pmrd
Length = 110
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 9 tatgcctggctccctgtatgccac 32
||||||||||||||||||||||||
Sbjct: 10 tatgcctggctccctgtatgccac 33
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 114 tggcgtgcgaggagccaagcat 135
||||||||||||||||||||||
Sbjct: 76 tggcgtgcgaggagccaagcat 97
>51611_ptc-miR160d:pmrd
Length = 103
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 9 tatgcctggctccctgtatgccac 32
||||||||||||||||||||||||
Sbjct: 9 tatgcctggctccctgtatgccac 32
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 114 tggcgtgcgaggagccaagcat 135
||||||||||||||||||||||
Sbjct: 75 tggcgtgcgaggagccaagcat 96
>51608_ptc-miR160a:pmrd
Length = 102
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 9 tatgcctggctccctgtatgccac 32
||||||||||||||||||||||||
Sbjct: 9 tatgcctggctccctgtatgccac 32
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 114 tggcgtgcgaggagccaagcat 135
||||||||||||||||||||||
Sbjct: 74 tggcgtgcgaggagccaagcat 95
>48832_osa-miR160m:pmrd
Length = 82
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgccactc 34
||||||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgccactc 24
>48828_osa-miR160c:pmrd
Length = 99
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgccactc 34
||||||||||||||||||||||||
Sbjct: 7 tgcctggctccctgtatgccactc 30
>48827_osa-miR160b:pmrd
Length = 139
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgccactc 34
||||||||||||||||||||||||
Sbjct: 30 tgcctggctccctgtatgccactc 53
>46936_ath-miR160c:pmrd
Length = 89
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 9 tatgcctggctccctgtatgccac 32
||||||||||||||||||||||||
Sbjct: 3 tatgcctggctccctgtatgccac 26
>51363_ppt-miR160e:pmrd
Length = 138
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgccact 33
|||||||||||||||||||||||
Sbjct: 30 tgcctggctccctgtatgccact 52
>48397_bra-miR160a:pmrd
Length = 127
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 9 tatgcctggctccctgtatgcca 31
|||||||||||||||||||||||
Sbjct: 24 tatgcctggctccctgtatgcca 46
>48396_bra-miR160a:pmrd
Length = 127
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 9 tatgcctggctccctgtatgcca 31
|||||||||||||||||||||||
Sbjct: 24 tatgcctggctccctgtatgcca 46
>47213_ath-miRf10113-akr:pmrd
Length = 85
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 9 tatgcctggctccctgtatgcca 31
|||||||||||||||||||||||
Sbjct: 2 tatgcctggctccctgtatgcca 24
>46934_ath-miR160a:pmrd
Length = 85
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 9 tatgcctggctccctgtatgcca 31
|||||||||||||||||||||||
Sbjct: 2 tatgcctggctccctgtatgcca 24
>54947_zma-miR160m:pmrd
Length = 81
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgccac 32
||||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgccac 22
>54945_zma-miR160h:pmrd
Length = 86
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgccac 32
||||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgccac 22
>54944_zma-miR160g:pmrd
Length = 86
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgccac 32
||||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgccac 22
>54939_zma-miR160b:pmrd
Length = 121
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgccac 32
||||||||||||||||||||||
Sbjct: 21 tgcctggctccctgtatgccac 42
>54938_zma-miR160a:pmrd
Length = 104
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgccac 32
||||||||||||||||||||||
Sbjct: 10 tgcctggctccctgtatgccac 31
>54575_smo-miR160b:pmrd
Length = 108
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgccac 32
||||||||||||||||||||||
Sbjct: 13 tgcctggctccctgtatgccac 34
>54405_sbi-miR160b:pmrd
Length = 82
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgccac 32
||||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgccac 22
>54404_sbi-miR160a:pmrd
Length = 84
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgccac 32
||||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgccac 22
>51364_ppt-miR160f:pmrd
Length = 138
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgccac 32
||||||||||||||||||||||
Sbjct: 30 tgcctggctccctgtatgccac 51
>51359_ppt-miR160a:pmrd
Length = 99
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgccac 32
||||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgccac 32
>51334_pga-miR160:pmrd
Length = 80
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgccac 32
||||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgccac 22
>48826_osa-miR160a:pmrd
Length = 88
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgccac 32
||||||||||||||||||||||
Sbjct: 4 tgcctggctccctgtatgccac 25
>47338_ath-miRf10238-akr:pmrd
Length = 89
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgccac 32
||||||||||||||||||||||
Sbjct: 5 tgcctggctccctgtatgccac 26
>46935_ath-miR160b:pmrd
Length = 89
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgccac 32
||||||||||||||||||||||
Sbjct: 5 tgcctggctccctgtatgccac 26
>54574_smo-miR160a:pmrd
Length = 106
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgcca 31
|||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgcca 31
>51610_ptc-miR160c:pmrd
Length = 98
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgcca 31
|||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgcca 31
>51609_ptc-miR160b:pmrd
Length = 98
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgcca 31
|||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgcca 31
>51367_ppt-miR160i:pmrd
Length = 139
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 gcctggctccctgtatgccac 32
|||||||||||||||||||||
Sbjct: 31 gcctggctccctgtatgccac 51
>48704_mtr-miR160e:pmrd
Length = 91
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgcca 31
|||||||||||||||||||||
Sbjct: 6 tgcctggctccctgtatgcca 26
>48703_mtr-miR160d:pmrd
Length = 91
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgcca 31
|||||||||||||||||||||
Sbjct: 6 tgcctggctccctgtatgcca 26
>48702_mtr-miR160b:pmrd
Length = 91
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgcca 31
|||||||||||||||||||||
Sbjct: 6 tgcctggctccctgtatgcca 26
>48635_gra-miR160b:pmrd
Length = 293
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 10 atgcctggctccctgtatgcc 30
|||||||||||||||||||||
Sbjct: 272 atgcctggctccctgtatgcc 292
>48634_gra-miR160a:pmrd
Length = 106
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 10 atgcctggctccctgtatgcc 30
|||||||||||||||||||||
Sbjct: 85 atgcctggctccctgtatgcc 105
>48542_gma-miR160a:pmrd
Length = 119
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgcca 31
|||||||||||||||||||||
Sbjct: 21 tgcctggctccctgtatgcca 41
>48306_bdi-miR160:pmrd
Length = 120
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 10 atgcctggctccctgtatgcc 30
|||||||||||||||||||||
Sbjct: 17 atgcctggctccctgtatgcc 37
>46865_aqc-miR160b:pmrd
Length = 82
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgcca 31
|||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcca 21
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 111 ggatggcgtgcgaggagccaagcat 135
|||||||||||||||||||| ||||
Sbjct: 57 ggatggcgtgcgaggagccatgcat 81
