miRNEST 2.0, an integrative microRNA resource :: BLAST
>54503_sbi-miR437f:pmrd
Length = 174
Score = 58.0 bits (29), Expect = 2e-09
Identities = 104/127 (81%), Gaps = 4/127 (3%)
Strand = Plus / Plus
Query: 25 tagaaaaatatattaacatctataatatcaaatatagtgcactttgaaaatatatttcat 84
|||||||||||||||||||||| |||| |||||| | |||||| | || | |||||||||
Sbjct: 33 tagaaaaatatattaacatctacaataccaaata-aatgcactatcaagacatatttcat 91
Query: 85 ggtctatctactgaaactaatttgatatcgaagatatttatgcatttttctataaacttg 144
| | || || ||||||||||||| | | ||| || |||| |||||||||||||||
Sbjct: 92 gttggatttaatgaaactaatttg---ttgttgatcttggtgcacttttctataaacttg 148
Query: 145 gtcaaag 151
|||||||
Sbjct: 149 gtcaaag 155
>54518_sbi-miR437v:pmrd
Length = 114
Score = 56.0 bits (28), Expect = 8e-09
Identities = 49/56 (87%)
Strand = Plus / Plus
Query: 96 tgaaactaatttgatatcgaagatatttatgcatttttctataaacttggtcaaag 151
||||||| |||||||| | |||| || |||||||||||||||||||||| |||||
Sbjct: 42 tgaaactgctttgatattgtagatgttgatgcatttttctataaacttggacaaag 97
Score = 48.1 bits (24), Expect = 2e-06
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 5 tctaaatttgactaagtttatagaaaaatatattaacatctataatatcaaa 56
||||| |||| | |||||||||||||||| || |||||||| |||||||||
Sbjct: 102 tctaactttgtccaagtttatagaaaaatgcatcaacatctacaatatcaaa 51
>54516_sbi-miR437t:pmrd
Length = 170
Score = 56.0 bits (28), Expect = 8e-09
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 116 agatatttatgcatttttctataaacttggtcaaag 151
|||| ||| |||||||||||||||||||||||||||
Sbjct: 118 agatgtttgtgcatttttctataaacttggtcaaag 153
Score = 54.0 bits (27), Expect = 3e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 27 gaaaaatatattaacatctataatatcaaat 57
|||||||||||||||||||| ||||||||||
Sbjct: 29 gaaaaatatattaacatctacaatatcaaat 59
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 5 tctaaatttgactaagtttatagaaaaat 33
||||| |||||| ||||||||||||||||
Sbjct: 158 tctaactttgaccaagtttatagaaaaat 130
>54504_sbi-miR437g:pmrd
Length = 176
Score = 56.0 bits (28), Expect = 8e-09
Identities = 49/56 (87%)
Strand = Plus / Plus
Query: 96 tgaaactaatttgatatcgaagatatttatgcatttttctataaacttggtcaaag 151
|||||||| |||||| | | |||| || ||||| ||||||||||||||||||||||
Sbjct: 102 tgaaactagtttgatgttgtagatgttgatgcaattttctataaacttggtcaaag 157
Score = 40.1 bits (20), Expect = 5e-04
Identities = 44/52 (84%)
Strand = Plus / Minus
Query: 5 tctaaatttgactaagtttatagaaaaatatattaacatctataatatcaaa 56
||||| |||||| |||||||||||||| | || |||||||| || ||||||
Sbjct: 162 tctaactttgaccaagtttatagaaaattgcatcaacatctacaacatcaaa 111
>54500_sbi-miR437b:pmrd
Length = 171
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 125 tgcatttttctataaacttggtcaaag 151
|||||||||||||||||||||||||||
Sbjct: 128 tgcatttttctataaacttggtcaaag 154
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 5 tctaaatttgactaagtttatagaaaaat 33
||||| |||||| ||||||||||||||||
Sbjct: 159 tctaactttgaccaagtttatagaaaaat 131
>55109_zma-miR437c:pmrd
Length = 177
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 130 ttttctataaacttggtcaaagctaaagaa 159
|||||||||||||||||||||||| |||||
Sbjct: 37 ttttctataaacttggtcaaagctgaagaa 8
>54508_sbi-miR437l:pmrd
Length = 170
Score = 52.0 bits (26), Expect = 1e-07
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 5 tctaaatttgactaagtttatagaaaaatatattaacatcta 46
||||| |||| | |||||| ||||||||||||||||||||||
Sbjct: 158 tctaactttggccaagtttttagaaaaatatattaacatcta 117
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 125 tgcatttttctataaacttggtcaa 149
|||||||||||||||| ||||||||
Sbjct: 42 tgcatttttctataaatttggtcaa 18
>55112_zma-miR437f:pmrd
Length = 342
Score = 50.1 bits (25), Expect = 5e-07
Identities = 50/57 (87%), Gaps = 1/57 (1%)
Strand = Plus / Minus
Query: 96 tgaaactaatttgatatcgaagatatttatgcattttt-ctataaacttggtcaaag 151
||||||| ||||||| | | | |||||| ||||||||| ||||||||||||||||||
Sbjct: 75 tgaaactgatttgatgttgtatatatttgtgcattttttctataaacttggtcaaag 19
Score = 40.1 bits (20), Expect = 5e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 5 tctaaatttgactaagtttatagaaaaa 32
||||| |||||| |||||||||||||||
Sbjct: 14 tctaactttgaccaagtttatagaaaaa 41
>55107_zma-miR437a:pmrd
Length = 342
Score = 50.1 bits (25), Expect = 5e-07
Identities = 50/57 (87%), Gaps = 1/57 (1%)
Strand = Plus / Plus
Query: 96 tgaaactaatttgatatcgaagatatttatgcatttt-tctataaacttggtcaaag 151
||||||| ||||||| | | | |||||| |||||||| |||||||||||||||||||
Sbjct: 268 tgaaactgatttgatgttgtatatatttgtgcattttttctataaacttggtcaaag 324
Score = 40.1 bits (20), Expect = 5e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 5 tctaaatttgactaagtttatagaaaaa 32
||||| |||||| |||||||||||||||
Sbjct: 329 tctaactttgaccaagtttatagaaaaa 302
>51322_pci-miR437:pmrd
Length = 166
Score = 50.1 bits (25), Expect = 5e-07
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 131 tttctataaacttggtcaaagctaaagaa 159
|||||||||||||||||||||||| ||||
Sbjct: 78 tttctataaacttggtcaaagctagagaa 50
>55111_zma-miR437e:pmrd
Length = 182
Score = 48.1 bits (24), Expect = 2e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 128 atttttctataaacttggtcaaagctaaagaa 159
|||||||||||||||||||| ||| |||||||
Sbjct: 140 atttttctataaacttggtcgaagttaaagaa 171
>54517_sbi-miR437u:pmrd
Length = 164
Score = 48.1 bits (24), Expect = 2e-06
Identities = 48/56 (85%)
Strand = Plus / Plus
Query: 96 tgaaactaatttgatatcgaagatatttatgcatttttctataaacttggtcaaag 151
||||||||||||||| || ||||||| | ||||||||||||||||||| ||||
Sbjct: 92 tgaaactaatttgatgtcatagatattggcgtatttttctataaacttggtgaaag 147
>48988_osa-miR437:pmrd
Length = 213
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 128 atttttctataaacttggtcaaag 151
||||||||||||||||||||||||
Sbjct: 135 atttttctataaacttggtcaaag 158
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 5 tctaaatttgactaagtttatagaaaaat 33
||||| |||||| ||||||||||||||||
Sbjct: 163 tctaactttgaccaagtttatagaaaaat 135
Score = 40.1 bits (20), Expect = 5e-04
Identities = 42/48 (87%), Gaps = 1/48 (2%)
Strand = Plus / Plus
Query: 11 tttgactaagtttatagaaaaatatattaacatctataatatcaaata 58
|||||| |||||| ||| |||||| ||||||||||| |||| ||||||
Sbjct: 58 tttgaccaagtttgtagtaaaata-attaacatctaaaataccaaata 104
>48987_osa-miR437:pmrd
Length = 213
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 128 atttttctataaacttggtcaaag 151
||||||||||||||||||||||||
Sbjct: 135 atttttctataaacttggtcaaag 158
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 5 tctaaatttgactaagtttatagaaaaat 33
||||| |||||| ||||||||||||||||
Sbjct: 163 tctaactttgaccaagtttatagaaaaat 135
Score = 40.1 bits (20), Expect = 5e-04
Identities = 42/48 (87%), Gaps = 1/48 (2%)
Strand = Plus / Plus
Query: 11 tttgactaagtttatagaaaaatatattaacatctataatatcaaata 58
|||||| |||||| ||| |||||| ||||||||||| |||| ||||||
Sbjct: 58 tttgaccaagtttgtagtaaaata-attaacatctaaaataccaaata 104
>48986_osa-miR437:pmrd
Length = 213
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 128 atttttctataaacttggtcaaag 151
||||||||||||||||||||||||
Sbjct: 135 atttttctataaacttggtcaaag 158
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 5 tctaaatttgactaagtttatagaaaaat 33
||||| |||||| ||||||||||||||||
Sbjct: 163 tctaactttgaccaagtttatagaaaaat 135
Score = 40.1 bits (20), Expect = 5e-04
Identities = 42/48 (87%), Gaps = 1/48 (2%)
Strand = Plus / Plus
Query: 11 tttgactaagtttatagaaaaatatattaacatctataatatcaaata 58
|||||| |||||| ||| |||||| ||||||||||| |||| ||||||
Sbjct: 58 tttgaccaagtttgtagtaaaata-attaacatctaaaataccaaata 104
>54651_sof-miR437:pmrd
Length = 149
Score = 46.1 bits (23), Expect = 8e-06
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 125 tgcatttttctataaacttggtcaaag 151
|||||||||||||||||||| ||||||
Sbjct: 45 tgcatttttctataaacttgatcaaag 19
>54519_sbi-miR437w:pmrd
Length = 173
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 124 atgcatttttctataaacttggt 146
|||||||||||||||||||||||
Sbjct: 41 atgcatttttctataaacttggt 19
>54505_sbi-miR437i:pmrd
Length = 170
Score = 46.1 bits (23), Expect = 8e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 125 tgcatttttctataaacttggtcaaag 151
||||||||||||||||||| |||||||
Sbjct: 127 tgcatttttctataaactttgtcaaag 153
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 131 tttctataaacttggtcaaagctaaagaa 159
|||||| |||||||||||||| |||||||
Sbjct: 36 tttctagaaacttggtcaaagttaaagaa 8
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 5 tctaaatttgactaagtttatagaaaaat 33
||||| |||||| ||||||||||||||||
Sbjct: 158 tctaactttgacaaagtttatagaaaaat 130
>48328_bdi-miR2504b:pmrd
Length = 128
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 128 atttttctataaacttggtcaaa 150
|||||||||||||||||||||||
Sbjct: 41 atttttctataaacttggtcaaa 19
>55108_zma-miR437b:pmrd
Length = 168
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 130 ttttctataaacttggtcaaag 151
||||||||||||||||||||||
Sbjct: 40 ttttctataaacttggtcaaag 19
>54510_sbi-miR437n:pmrd
Length = 182
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 130 ttttctataaacttggtcaaag 151
||||||||||||||||||||||
Sbjct: 39 ttttctataaacttggtcaaag 18
Score = 40.1 bits (20), Expect = 5e-04
Identities = 35/40 (87%)
Strand = Plus / Minus
Query: 5 tctaaatttgactaagtttatagaaaaatatattaacatc 44
||||| ||| || |||||| |||||||||||| |||||||
Sbjct: 168 tctaactttaaccaagtttgtagaaaaatatactaacatc 129
>54506_sbi-miR437j:pmrd
Length = 172
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 130 ttttctataaacttggtcaaag 151
||||||||||||||||||||||
Sbjct: 37 ttttctataaacttggtcaaag 16
>54514_sbi-miR437r:pmrd
Length = 180
Score = 42.1 bits (21), Expect = 1e-04
Identities = 45/53 (84%)
Strand = Plus / Minus
Query: 98 aaactaatttgatatcgaagatatttatgcatttttctataaacttggtcaaa 150
||||||||||||| | | | ||||| | |||||||||||| |||||||||||
Sbjct: 70 aaactaatttgatgttgtaaatattagtacatttttctatagacttggtcaaa 18
>54509_sbi-miR437m:pmrd
Length = 174
Score = 42.1 bits (21), Expect = 1e-04
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 11 tttgactaagtttatagaaaaatatattaacat 43
|||||| |||||| ||||||| |||||||||||
Sbjct: 152 tttgaccaagtttttagaaaattatattaacat 120
>54526_sbi-miR1435a:pmrd
Length = 287
Score = 40.1 bits (20), Expect = 5e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 124 atgcatttttctataaacttggtcaaag 151
|||||| ||||| |||||||||||||||
Sbjct: 200 atgcatctttctgtaaacttggtcaaag 227
>54507_sbi-miR437k:pmrd
Length = 172
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 128 atttttctataaacttggtcaaag 151
||||||||| ||||||||||||||
Sbjct: 130 atttttctaaaaacttggtcaaag 153
