miRNEST 2.0, an integrative microRNA resource :: BLAST
>54939_zma-miR160b:pmrd
Length = 121
Score = 163 bits (82), Expect = 3e-41
Identities = 95/98 (96%), Gaps = 1/98 (1%)
Strand = Plus / Plus
Query: 4 tcgtgtgtgcctggctccctgtatgccacacatgtagcccaacccgtggcgcgattggat 63
||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||
Sbjct: 14 tcgtgtgtgcctggctccctgtatgccacacatgtagcc-aacccgtggcgtgattggat 72
Query: 64 gctgtgggtggcgtgcaaggagccaagcatgcagaaca 101
||||||||||||||||||||||||||||||||| ||||
Sbjct: 73 gctgtgggtggcgtgcaaggagccaagcatgcataaca 110
>54405_sbi-miR160b:pmrd
Length = 82
Score = 155 bits (78), Expect = 7e-39
Identities = 81/82 (98%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgccacacatgtagcccaacccgtggcgcgattggatgctgtgg 70
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 1 tgcctggctccctgtatgccacacatgtagcccaacccgtggcgtgattggatgctgtgg 60
Query: 71 gtggcgtgcaaggagccaagca 92
||||||||||||||||||||||
Sbjct: 61 gtggcgtgcaaggagccaagca 82
>54947_zma-miR160m:pmrd
Length = 81
Score = 139 bits (70), Expect = 4e-34
Identities = 80/82 (97%), Gaps = 1/82 (1%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgccacacatgtagcccaacccgtggcgcgattggatgctgtgg 70
|||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||
Sbjct: 1 tgcctggctccctgtatgccacacatgtagcc-aacccgtggcgtgattggatgctgtgg 59
Query: 71 gtggcgtgcaaggagccaagca 92
||||||||||||||||||||||
Sbjct: 60 gtggcgtgcaaggagccaagca 81
>48827_osa-miR160b:pmrd
Length = 139
Score = 123 bits (62), Expect = 3e-29
Identities = 80/86 (93%)
Strand = Plus / Plus
Query: 10 gtgcctggctccctgtatgccacacatgtagcccaacccgtggcgcgattggatgctgtg 69
||||||||||||||||||||||| |||||||||||| || ||| | | ||||||||||||
Sbjct: 29 gtgcctggctccctgtatgccactcatgtagcccaatccatggtgtgtttggatgctgtg 88
Query: 70 ggtggcgtgcaaggagccaagcatgc 95
||||||||||||||||||||||||||
Sbjct: 89 ggtggcgtgcaaggagccaagcatgc 114
>48832_osa-miR160m:pmrd
Length = 82
Score = 115 bits (58), Expect = 6e-27
Identities = 76/82 (92%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgccacacatgtagcccaacccgtggcgcgattggatgctgtgg 70
|||||||||||||||||||||| |||||||||||| || ||| | | |||||||||||||
Sbjct: 1 tgcctggctccctgtatgccactcatgtagcccaatccatggtgtgtttggatgctgtgg 60
Query: 71 gtggcgtgcaaggagccaagca 92
||||||||||||||||||||||
Sbjct: 61 gtggcgtgcaaggagccaagca 82
>54404_sbi-miR160a:pmrd
Length = 84
Score = 75.8 bits (38), Expect = 5e-15
Identities = 38/38 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgccacacatgtagcccaaccc 48
||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgccacacatgtagcccaaccc 38
>48826_osa-miR160a:pmrd
Length = 88
Score = 73.8 bits (37), Expect = 2e-14
Identities = 40/41 (97%)
Strand = Plus / Plus
Query: 8 gtgtgcctggctccctgtatgccacacatgtagcccaaccc 48
||||||||||||||||||||||||||||||||| |||||||
Sbjct: 1 gtgtgcctggctccctgtatgccacacatgtagaccaaccc 41
>54938_zma-miR160a:pmrd
Length = 104
Score = 65.9 bits (33), Expect = 5e-12
Identities = 78/91 (85%), Gaps = 4/91 (4%)
Strand = Plus / Plus
Query: 10 gtgcctggctccctgtatgccacacatgta--gcccaaccc--gtggcgcgattggatgc 65
|||||||||||||||||||||||||||||| ||||||||| || | ||| |||
Sbjct: 9 gtgcctggctccctgtatgccacacatgtagcgcccaacccagatgytaaggttgcctgc 68
Query: 66 tgtgggtggcgtgcaaggagccaagcatgca 96
|||||||||||||||||| ||||||||||||
Sbjct: 69 tgtgggtggcgtgcaaggggccaagcatgca 99
>54945_zma-miR160h:pmrd
Length = 86
Score = 61.9 bits (31), Expect = 8e-11
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgccacacatgtagc 41
|||||||||||||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgccacacatgtagc 31
>54944_zma-miR160g:pmrd
Length = 86
Score = 61.9 bits (31), Expect = 8e-11
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgccacacatgtagc 41
|||||||||||||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgccacacatgtagc 31
>54780_vvi-miR160c:pmrd
Length = 106
Score = 52.0 bits (26), Expect = 8e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 9 tgtgcctggctccctgtatgccacac 34
||||||||||||||||||||||||||
Sbjct: 9 tgtgcctggctccctgtatgccacac 34
Score = 42.1 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 69 gggtggcgtgcaaggagccaagcat 93
||||||||||| |||||||||||||
Sbjct: 71 gggtggcgtgcgaggagccaagcat 95
>54940_zma-miR160c:pmrd
Length = 100
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 9 tgtgcctggctccctgtatgccac 32
||||||||||||||||||||||||
Sbjct: 5 tgtgcctggctccctgtatgccac 28
>48828_osa-miR160c:pmrd
Length = 99
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 9 tgtgcctggctccctgtatgccac 32
||||||||||||||||||||||||
Sbjct: 5 tgtgcctggctccctgtatgccac 28
>48791_oba-miR160:pmrd
Length = 90
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 9 tgtgcctggctccctgtatgccac 32
||||||||||||||||||||||||
Sbjct: 2 tgtgcctggctccctgtatgccac 25
Score = 42.1 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 69 gggtggcgtgcaaggagccaagcat 93
||||||||||| |||||||||||||
Sbjct: 64 gggtggcgtgcgaggagccaagcat 88
>48703_mtr-miR160d:pmrd
Length = 91
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 8 gtgtgcctggctccctgtatgcca 31
||||||||||||||||||||||||
Sbjct: 3 gtgtgcctggctccctgtatgcca 26
>47338_ath-miRf10238-akr:pmrd
Length = 89
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 10 gtgcctggctccctgtatgccaca 33
||||||||||||||||||||||||
Sbjct: 4 gtgcctggctccctgtatgccaca 27
>46935_ath-miR160b:pmrd
Length = 89
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 10 gtgcctggctccctgtatgccaca 33
||||||||||||||||||||||||
Sbjct: 4 gtgcctggctccctgtatgccaca 27
>53874_ptc-miRf12052-akr:pmrd
Length = 110
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgccaca 33
|||||||||||||||||||||||
Sbjct: 12 tgcctggctccctgtatgccaca 34
Score = 44.1 bits (22), Expect = 2e-05
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 56 gattggatgctgtgggtggcgtgcaaggagccaagcat 93
|||||| ||||| |||||||||| |||||||||||||
Sbjct: 60 gattggctgctgccggtggcgtgcgaggagccaagcat 97
>51611_ptc-miR160d:pmrd
Length = 103
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgccaca 33
|||||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgccaca 33
Score = 44.1 bits (22), Expect = 2e-05
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 56 gattggatgctgtgggtggcgtgcaaggagccaagcat 93
|||||| ||||| |||||||||| |||||||||||||
Sbjct: 59 gattggctgctgccggtggcgtgcgaggagccaagcat 96
>51610_ptc-miR160c:pmrd
Length = 98
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 9 tgtgcctggctccctgtatgcca 31
|||||||||||||||||||||||
Sbjct: 9 tgtgcctggctccctgtatgcca 31
>51609_ptc-miR160b:pmrd
Length = 98
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 9 tgtgcctggctccctgtatgcca 31
|||||||||||||||||||||||
Sbjct: 9 tgtgcctggctccctgtatgcca 31
>51608_ptc-miR160a:pmrd
Length = 102
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgccaca 33
|||||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgccaca 33
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 70 ggtggcgtgcaaggagccaagcat 93
|||||||||| |||||||||||||
Sbjct: 72 ggtggcgtgcgaggagccaagcat 95
>51334_pga-miR160:pmrd
Length = 80
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgccaca 33
|||||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgccaca 23
>48704_mtr-miR160e:pmrd
Length = 91
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 9 tgtgcctggctccctgtatgcca 31
|||||||||||||||||||||||
Sbjct: 4 tgtgcctggctccctgtatgcca 26
>48702_mtr-miR160b:pmrd
Length = 91
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 9 tgtgcctggctccctgtatgcca 31
|||||||||||||||||||||||
Sbjct: 4 tgtgcctggctccctgtatgcca 26
>48542_gma-miR160a:pmrd
Length = 119
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 9 tgtgcctggctccctgtatgcca 31
|||||||||||||||||||||||
Sbjct: 19 tgtgcctggctccctgtatgcca 41
>54946_zma-miR160i:pmrd
Length = 81
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgccac 32
||||||||||||||||||||||
Sbjct: 2 tgcctggctccctgtatgccac 23
>54942_zma-miR160e:pmrd
Length = 94
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgccac 32
||||||||||||||||||||||
Sbjct: 9 tgcctggctccctgtatgccac 30
>54941_zma-miR160d:pmrd
Length = 142
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgccac 32
||||||||||||||||||||||
Sbjct: 21 tgcctggctccctgtatgccac 42
>54759_ttu-miR160a:pmrd
Length = 87
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgccac 32
||||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgccac 22
>54675_tae-miR160:pmrd
Length = 148
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgccac 32
||||||||||||||||||||||
Sbjct: 22 tgcctggctccctgtatgccac 43
>54575_smo-miR160b:pmrd
Length = 108
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgccac 32
||||||||||||||||||||||
Sbjct: 13 tgcctggctccctgtatgccac 34
>54408_sbi-miR160e:pmrd
Length = 95
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgccac 32
||||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgccac 22
>54407_sbi-miR160d:pmrd
Length = 100
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgccac 32
||||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgccac 22
>54406_sbi-miR160c:pmrd
Length = 83
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgccac 32
||||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgccac 22
>51364_ppt-miR160f:pmrd
Length = 138
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgccac 32
||||||||||||||||||||||
Sbjct: 30 tgcctggctccctgtatgccac 51
>51363_ppt-miR160e:pmrd
Length = 138
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgccac 32
||||||||||||||||||||||
Sbjct: 30 tgcctggctccctgtatgccac 51
>51359_ppt-miR160a:pmrd
Length = 99
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgccac 32
||||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgccac 32
>48833_osa-miR160n:pmrd
Length = 131
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgccac 32
||||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgccac 22
>48829_osa-miR160d:pmrd
Length = 142
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgccac 32
||||||||||||||||||||||
Sbjct: 8 tgcctggctccctgtatgccac 29
>48397_bra-miR160a:pmrd
Length = 127
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 6 gtgtgtgcctggctccctgtatgcca 31
|||| |||||||||||||||||||||
Sbjct: 21 gtgtatgcctggctccctgtatgcca 46
>48396_bra-miR160a:pmrd
Length = 127
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 6 gtgtgtgcctggctccctgtatgcca 31
|||| |||||||||||||||||||||
Sbjct: 21 gtgtatgcctggctccctgtatgcca 46
>46936_ath-miR160c:pmrd
Length = 89
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgccac 32
||||||||||||||||||||||
Sbjct: 5 tgcctggctccctgtatgccac 26
>54783_vvi-miR160f:pmrd
Length = 102
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgcca 31
|||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgcca 31
>54781_vvi-miR160d:pmrd
Length = 102
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgcca 31
|||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgcca 31
>54574_smo-miR160a:pmrd
Length = 106
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgcca 31
|||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgcca 31
>54541_sly-miR160a:pmrd
Length = 129
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgcca 31
|||||||||||||||||||||
Sbjct: 20 tgcctggctccctgtatgcca 40
>51615_ptc-miR160h:pmrd
Length = 98
Score = 42.1 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 7 tgtgtgcctggctccctgtatgcca 31
|||||||||||||||||| ||||||
Sbjct: 7 tgtgtgcctggctccctgcatgcca 31
>51367_ppt-miR160i:pmrd
Length = 139
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 gcctggctccctgtatgccac 32
|||||||||||||||||||||
Sbjct: 31 gcctggctccctgtatgccac 51
>48658_hvv-miR160a:pmrd
Length = 344
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgcca 31
|||||||||||||||||||||
Sbjct: 324 tgcctggctccctgtatgcca 344
>47213_ath-miRf10113-akr:pmrd
Length = 85
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgcca 31
|||||||||||||||||||||
Sbjct: 4 tgcctggctccctgtatgcca 24
>46934_ath-miR160a:pmrd
Length = 85
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgcca 31
|||||||||||||||||||||
Sbjct: 4 tgcctggctccctgtatgcca 24
>46865_aqc-miR160b:pmrd
Length = 82
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgcca 31
|||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcca 21
