miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>51119_osa-miRf11904-akr:pmrd
Length = 88
Score = 46.1 bits (23), Expect = 6e-06
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 24 tttagtaccggtcggtaacaccaaccaatactaaa 58
|||||| ||||| ||||||||||||| ||||||||
Sbjct: 40 tttagttccggttggtaacaccaaccgatactaaa 6
>50528_osa-miRf11313-akr:pmrd
Length = 160
Score = 46.1 bits (23), Expect = 6e-06
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 24 tttagtaccggtcggtaacaccaaccaatactaaa 58
|||||| ||||| ||||||||||||||| ||||||
Sbjct: 5 tttagtcccggttggtaacaccaaccaagactaaa 39
>49799_osa-miRf10584-akr:pmrd
Length = 105
Score = 46.1 bits (23), Expect = 6e-06
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 24 tttagtaccggtcggtaacaccaacca 50
|||||||||||| ||||||||||||||
Sbjct: 39 tttagtaccggttggtaacaccaacca 13
>49798_osa-miRf10583-akr:pmrd
Length = 107
Score = 46.1 bits (23), Expect = 6e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 24 tttagtaccggtcggtaacaccaacca 50
|||||||||||| ||||||||||||||
Sbjct: 68 tttagtaccggttggtaacaccaacca 94
>51275_osa-miRf12060-akr:pmrd
Length = 81
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 24 tttagtaccggtcggtaacaccaacc 49
|||||||||||| |||||||||||||
Sbjct: 46 tttagtaccggttggtaacaccaacc 21
>50214_osa-miRf10999-akr:pmrd
Length = 130
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 24 tttagtaccggtcggtaacaccaacc 49
|||||||||||| |||||||||||||
Sbjct: 34 tttagtaccggttggtaacaccaacc 9
>49828_osa-miRf10613-akr:pmrd
Length = 129
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 24 tttagtaccggtcggtaacaccaacc 49
|||||||||||| |||||||||||||
Sbjct: 2 tttagtaccggttggtaacaccaacc 27
>49827_osa-miRf10612-akr:pmrd
Length = 133
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 24 tttagtaccggtcggtaacaccaacc 49
|||||||||||| |||||||||||||
Sbjct: 130 tttagtaccggttggtaacaccaacc 105
>49826_osa-miRf10611-akr:pmrd
Length = 135
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 24 tttagtaccggtcggtaacaccaacc 49
|||||||||||| |||||||||||||
Sbjct: 5 tttagtaccggttggtaacaccaacc 30
>49825_osa-miRf10610-akr:pmrd
Length = 94
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 24 tttagtaccggtcggtaacaccaacc 49
|||||||||||| |||||||||||||
Sbjct: 41 tttagtaccggttggtaacaccaacc 16
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 24 tttagtaccggtcggtaacaccaacc 49
|||||||||||| |||||||||||||
Sbjct: 55 tttagtaccggttggtaacaccaacc 80
>49605_osa-miRf10390-akr:pmrd
Length = 82
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 24 tttagtaccggtcggtaacaccaacc 49
|||||||||||| |||||||||||||
Sbjct: 46 tttagtaccggttggtaacaccaacc 71
>49604_osa-miRf10389-akr:pmrd
Length = 82
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 24 tttagtaccggtcggtaacaccaacc 49
|||||||||||| |||||||||||||
Sbjct: 46 tttagtaccggttggtaacaccaacc 71
>50614_osa-miRf11399-akr:pmrd
Length = 74
Score = 42.1 bits (21), Expect = 9e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 25 ttagtaccggtcggtaacaccaacc 49
||||||||||| |||||||||||||
Sbjct: 43 ttagtaccggttggtaacaccaacc 67
>50613_osa-miRf11398-akr:pmrd
Length = 76
Score = 42.1 bits (21), Expect = 9e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 25 ttagtaccggtcggtaacaccaacc 49
||||||||||| |||||||||||||
Sbjct: 44 ttagtaccggttggtaacaccaacc 68
>49979_osa-miRf10764-akr:pmrd
Length = 85
Score = 40.1 bits (20), Expect = 4e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 31 ccggtcggtaacaccaaccaatactaaa 58
||||| ||||||||||||| ||||||||
Sbjct: 57 ccggttggtaacaccaaccgatactaaa 84
>49674_osa-miRf10459-akr:pmrd
Length = 79
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 24 tttagtaccggtcggtaacaccaa 47
|||||||||||| |||||||||||
Sbjct: 1 tttagtaccggttggtaacaccaa 24
