miRNEST 2.0, an integrative microRNA resource :: BLAST
>51338_pgl-miR159:pmrd
Length = 226
Score = 210 bits (106), Expect = 4e-55
Identities = 205/231 (88%), Gaps = 9/231 (3%)
Strand = Plus / Plus
Query: 9 cggagctcctatcattccaatgaaaggccctttcgctgggttggtacagctgctcgttca 68
||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||
Sbjct: 1 cggagctcctatcattccaatgaaaggttgtttttgtgggttggtacagctgctcgttca 60
Query: 69 tggttcccactagtcctatctcatcacctggagggtttatctgaaagagagggtgagatg 128
|||||||||||| ||||||||||| | |||||| ||||||||| |||||| | ||||
Sbjct: 61 tggttcccacta-tcctatctcatggc-tggagg-tttatctgagagagagagagagaga 117
Query: 129 agtcatgagtggcc----tggtgtttggcttgagataggctttgtggcttgcatgaccga 184
| |||||||| | ||||||| |||||||||||||||| |||||||||||||||||
Sbjct: 118 tgagatgagtggtcggtctggtgtt-ggcttgagataggctt-gtggcttgcatgaccga 175
Query: 185 ggagctgcaccgtccccttgctggccgctctttggattgaagggagctctg 235
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 176 ggagctgcaccgtccccttgctggccgctctttggattgaagggagctctg 226
>54629_sof-miR159b:pmrd
Length = 266
Score = 141 bits (71), Expect = 3e-34
Identities = 81/83 (97%), Gaps = 1/83 (1%)
Strand = Plus / Plus
Query: 154 ttgagataggctttgtggcttgcatgaccgaggagctgcaccgtccccttgctggccgct 213
||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 167 ttgagataggctt-gtggtttgcatgaccgaggagctgcaccgtccccttgctggccgct 225
Query: 214 ctttggattgaagggagctctgc 236
|||||||||||||||||||||||
Sbjct: 226 ctttggattgaagggagctctgc 248
Score = 83.8 bits (42), Expect = 6e-17
Identities = 80/90 (88%), Gaps = 2/90 (2%)
Strand = Plus / Plus
Query: 5 gaagcggagctcctatcattccaatgaaaggccctttcgctgggttggtacagctgctcg 64
|||||||||||||||||||||||||||| |||| || | |||| ||| | ||||||||
Sbjct: 17 gaagcggagctcctatcattccaatgaagggccgttctgaagggt-ggttccgctgctcg 75
Query: 65 ttcatggttcccactagtcctatctcatca 94
|||||||||||||||| |||||||||||||
Sbjct: 76 ttcatggttcccacta-tcctatctcatca 104
>54628_sof-miR159a:pmrd
Length = 265
Score = 141 bits (71), Expect = 3e-34
Identities = 81/83 (97%), Gaps = 1/83 (1%)
Strand = Plus / Plus
Query: 154 ttgagataggctttgtggcttgcatgaccgaggagctgcaccgtccccttgctggccgct 213
||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 166 ttgagataggctt-gtggtttgcatgaccgaggagctgcaccgtccccttgctggccgct 224
Query: 214 ctttggattgaagggagctctgc 236
|||||||||||||||||||||||
Sbjct: 225 ctttggattgaagggagctctgc 247
Score = 83.8 bits (42), Expect = 6e-17
Identities = 80/90 (88%), Gaps = 2/90 (2%)
Strand = Plus / Plus
Query: 5 gaagcggagctcctatcattccaatgaaaggccctttcgctgggttggtacagctgctcg 64
|||||||||||||||||||||||||||| |||| || | |||||| | | ||||||||
Sbjct: 17 gaagcggagctcctatcattccaatgaagggccgttctgaagggttgttcc-gctgctcg 75
Query: 65 ttcatggttcccactagtcctatctcatca 94
|||||||||||||||| |||||||||||||
Sbjct: 76 ttcatggttcccacta-tcctatctcatca 104
>54930_zma-miR159a:pmrd
Length = 246
Score = 133 bits (67), Expect = 7e-32
Identities = 80/83 (96%), Gaps = 1/83 (1%)
Strand = Plus / Plus
Query: 154 ttgagataggctttgtggcttgcatgaccgaggagctgcaccgtccccttgctggccgct 213
||||||||||||| |||| |||||||||||||||||||||||| ||||||||||||||||
Sbjct: 147 ttgagataggctt-gtggtttgcatgaccgaggagctgcaccgcccccttgctggccgct 205
Query: 214 ctttggattgaagggagctctgc 236
|||||||||||||||||||||||
Sbjct: 206 ctttggattgaagggagctctgc 228
Score = 91.7 bits (46), Expect = 2e-19
Identities = 80/90 (88%), Gaps = 1/90 (1%)
Strand = Plus / Plus
Query: 5 gaagcggagctcctatcattccaatgaaaggccctttcgctgggttggtacagctgctcg 64
|||||||||||||||||||||||||||| || | || || ||| |||| | ||||||||
Sbjct: 17 gaagcggagctcctatcattccaatgaagggtcgttccgaagggctggttccgctgctcg 76
Query: 65 ttcatggttcccactagtcctatctcatca 94
|||||||||||||||| |||||||||||||
Sbjct: 77 ttcatggttcccacta-tcctatctcatca 105
>54631_sof-miR159d:pmrd
Length = 265
Score = 125 bits (63), Expect = 2e-29
Identities = 69/71 (97%)
Strand = Plus / Plus
Query: 166 ttgtggcttgcatgaccgaggagctgcaccgtccccttgctggccgctctttggattgaa 225
|||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 177 ttgtggtttgcatgaccgatgagctgcaccgtccccttgctggccgctctttggattgaa 236
Query: 226 gggagctctgc 236
|||||||||||
Sbjct: 237 gggagctctgc 247
Score = 83.8 bits (42), Expect = 6e-17
Identities = 80/90 (88%), Gaps = 2/90 (2%)
Strand = Plus / Plus
Query: 5 gaagcggagctcctatcattccaatgaaaggccctttcgctgggttggtacagctgctcg 64
|||||||||||||||||||||||||||| |||| || | |||||| | | ||||||||
Sbjct: 17 gaagcggagctcctatcattccaatgaagggccgttctgaagggttgttcc-gctgctcg 75
Query: 65 ttcatggttcccactagtcctatctcatca 94
|||||||||||||||| |||||||||||||
Sbjct: 76 ttcatggttcccacta-tcctatctcatca 104
>54632_sof-miR159e:pmrd
Length = 264
Score = 121 bits (61), Expect = 3e-28
Identities = 77/81 (95%), Gaps = 1/81 (1%)
Strand = Plus / Plus
Query: 154 ttgagataggctttgtggcttgcatgaccgaggagctgcaccgtccccttgctggccgct 213
||||||||||||| |||| |||||||||||| ||||||||||||||||||||||||||||
Sbjct: 165 ttgagataggctt-gtggtttgcatgaccgaagagctgcaccgtccccttgctggccgct 223
Query: 214 ctttggattgaagggagctct 234
|||||||||||| ||||||||
Sbjct: 224 ctttggattgaaaggagctct 244
Score = 83.8 bits (42), Expect = 6e-17
Identities = 80/90 (88%), Gaps = 2/90 (2%)
Strand = Plus / Plus
Query: 5 gaagcggagctcctatcattccaatgaaaggccctttcgctgggttggtacagctgctcg 64
|||||||||||||||||||||||||||| |||| || | |||| ||| | ||||||||
Sbjct: 16 gaagcggagctcctatcattccaatgaagggccgttctgaagggt-ggttccgctgctcg 74
Query: 65 ttcatggttcccactagtcctatctcatca 94
|||||||||||||||| |||||||||||||
Sbjct: 75 ttcatggttcccacta-tcctatctcatca 103
>54392_sar-miR159:pmrd
Length = 175
Score = 113 bits (57), Expect = 6e-26
Identities = 66/69 (95%)
Strand = Plus / Plus
Query: 167 tgtggcttgcatgaccgaggagctgcaccgtccccttgctggccgctctttggattgaag 226
||||||||||||||||||||||| ||| |||||||| |||||||||||||||||||||||
Sbjct: 107 tgtggcttgcatgaccgaggagccgcatcgtcccctcgctggccgctctttggattgaag 166
Query: 227 ggagctctg 235
|||||||||
Sbjct: 167 ggagctctg 175
Score = 71.9 bits (36), Expect = 2e-13
Identities = 64/72 (88%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 10 ggagctcctatcattccaatgaaaggccctt-tcgctgggttggtacagctgctcgttca 68
|||||||||||||||||||||||||| | | | | ||| |||||||||||||||||||
Sbjct: 2 ggagctcctatcattccaatgaaaggtcttgctagaaggggtggtacagctgctcgttca 61
Query: 69 tggttcccacta 80
||||||||||||
Sbjct: 62 tggttcccacta 73
>54931_zma-miR159b:pmrd
Length = 221
Score = 87.7 bits (44), Expect = 4e-18
Identities = 83/92 (90%), Gaps = 3/92 (3%)
Strand = Plus / Plus
Query: 152 gcttgagataggctttgtggcttgcatgaccgaggagctgcaccgtcccctt-gctggcc 210
||||||||| ||||| |||| |||||||||||||||||||||| |||||||| | || ||
Sbjct: 120 gcttgagatgggctt-gtggtttgcatgaccgaggagctgcac-gtccccttcgttgacc 177
Query: 211 gctctttggattgaagggagctctgcgtcttg 242
||| |||||||||||||||||||||| |||||
Sbjct: 178 gctgtttggattgaagggagctctgcatcttg 209
Score = 65.9 bits (33), Expect = 1e-11
Identities = 43/45 (95%), Gaps = 1/45 (2%)
Strand = Plus / Plus
Query: 50 tggtacagctgctcgttcatggttcccactagtcctatctcatca 94
|||||||||||||||||||||||||||||| |||| |||||||||
Sbjct: 61 tggtacagctgctcgttcatggttcccact-gtcccatctcatca 104
>54934_zma-miR159e:pmrd
Length = 203
Score = 75.8 bits (38), Expect = 1e-14
Identities = 76/86 (88%), Gaps = 2/86 (2%)
Strand = Plus / Plus
Query: 152 gcttgagataggctttgtggcttgcatgaccgaggagctgcaccgtcccctt-gctggcc 210
||||||||| ||||| |||| |||||||||||||||||||| ||||||||| | || ||
Sbjct: 119 gcttgagatgggctt-gtggtttgcatgaccgaggagctgcctcgtccccttcgttgacc 177
Query: 211 gctctttggattgaagggagctctgc 236
||| |||||| |||||||||||||||
Sbjct: 178 gctgtttggagtgaagggagctctgc 203
Score = 65.9 bits (33), Expect = 1e-11
Identities = 43/45 (95%), Gaps = 1/45 (2%)
Strand = Plus / Plus
Query: 50 tggtacagctgctcgttcatggttcccactagtcctatctcatca 94
|||||||||||||||||||||||||||||| |||| |||||||||
Sbjct: 43 tggtacagctgctcgttcatggttcccact-gtcccatctcatca 86
>48820_osa-miR159b:pmrd
Length = 188
Score = 69.9 bits (35), Expect = 9e-13
Identities = 75/87 (86%), Gaps = 1/87 (1%)
Strand = Plus / Plus
Query: 156 gagataggctttgtggcttgcatgaccgaggagctgcaccgtccccttgctggccgctct 215
||||||||||| |||| |||||||||| |||||| | | | | |||||||| || ||||
Sbjct: 100 gagataggctt-gtggtttgcatgaccaaggagccgaatcaactccttgctgaccactct 158
Query: 216 ttggattgaagggagctctgcgtcttg 242
||||||||||||||||||||| |||||
Sbjct: 159 ttggattgaagggagctctgcatcttg 185
Score = 48.1 bits (24), Expect = 3e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 53 tacagctgctcgttcatggttcccacta 80
|||||||||| |||||||||||||||||
Sbjct: 54 tacagctgcttgttcatggttcccacta 81
>54673_tae-miR159a:pmrd
Length = 177
Score = 67.9 bits (34), Expect = 3e-12
Identities = 61/70 (87%)
Strand = Plus / Plus
Query: 167 tgtggcttgcatgaccgaggagctgcaccgtccccttgctggccgctctttggattgaag 226
||||| ||||||||||||||||| || || |||| |||| ||||| ||||||||||||
Sbjct: 106 tgtggtttgcatgaccgaggagccgcttcgatccctcgctgaccgctgtttggattgaag 165
Query: 227 ggagctctgc 236
||||||||||
Sbjct: 166 ggagctctgc 175
Score = 58.0 bits (29), Expect = 3e-09
Identities = 42/45 (93%), Gaps = 1/45 (2%)
Strand = Plus / Plus
Query: 46 gggttggtacagctgctcgttcatggttcccactagtcctatctc 90
||||| || |||||||||||||||||||||||||| |||||||||
Sbjct: 39 gggtttgtgcagctgctcgttcatggttcccacta-tcctatctc 82
>48657_hvv-miR159b:pmrd
Length = 174
Score = 63.9 bits (32), Expect = 5e-11
Identities = 69/80 (86%), Gaps = 1/80 (1%)
Strand = Plus / Plus
Query: 156 gagataggctttgtggcttgcatgaccgaggagctgcaccgtccccttgctggccgctct 215
||||||||||| |||| |||||||| |||||||| || || |||| |||| ||||| |
Sbjct: 96 gagataggctt-gtggtttgcatgatcgaggagccgcttcgatccctcgctgaccgctgt 154
Query: 216 ttggattgaagggagctctg 235
||||||||||||||||||||
Sbjct: 155 ttggattgaagggagctctg 174
Score = 50.1 bits (25), Expect = 8e-07
Identities = 41/45 (91%), Gaps = 1/45 (2%)
Strand = Plus / Plus
Query: 46 gggttggtacagctgctcgttcatggttcccactagtcctatctc 90
||||| || |||||||| ||||||||||||||||| |||||||||
Sbjct: 38 gggtttgtgcagctgcttgttcatggttcccacta-tcctatctc 81
>48819_osa-miR159a:pmrd
Length = 272
Score = 52.0 bits (26), Expect = 2e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 212 ctctttggattgaagggagctctgcgtctt 241
||||||||||||||||||||||||| ||||
Sbjct: 239 ctctttggattgaagggagctctgcatctt 268
>48796_oru-miR159:pmrd
Length = 274
Score = 52.0 bits (26), Expect = 2e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 212 ctctttggattgaagggagctctgcgtctt 241
||||||||||||||||||||||||| ||||
Sbjct: 239 ctctttggattgaagggagctctgcatctt 268
>54674_tae-miR159b:pmrd
Length = 255
Score = 50.1 bits (25), Expect = 8e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 212 ctctttggattgaagggagctctgc 236
|||||||||||||||||||||||||
Sbjct: 227 ctctttggattgaagggagctctgc 251
>48825_osa-miR159m:pmrd
Length = 249
Score = 48.1 bits (24), Expect = 3e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 212 ctctttggattgaagggagctctg 235
||||||||||||||||||||||||
Sbjct: 226 ctctttggattgaagggagctctg 249
>48656_hvv-miR159a:pmrd
Length = 303
Score = 48.1 bits (24), Expect = 3e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 215 tttggattgaagggagctctgcgtcttg 242
|||||||||||||||||||||| |||||
Sbjct: 1 tttggattgaagggagctctgcatcttg 28
>54937_zma-miR159m:pmrd
Length = 457
Score = 44.1 bits (22), Expect = 5e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 215 tttggattgaagggagctctgc 236
||||||||||||||||||||||
Sbjct: 1 tttggattgaagggagctctgc 22
>54653_spr-miR159:pmrd
Length = 392
Score = 44.1 bits (22), Expect = 5e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 215 tttggattgaagggagctctgc 236
||||||||||||||||||||||
Sbjct: 1 tttggattgaagggagctctgc 22
>54378_pvu-miR159:pmrd
Length = 174
Score = 44.1 bits (22), Expect = 5e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 213 tctttggattgaagggagctct 234
||||||||||||||||||||||
Sbjct: 151 tctttggattgaagggagctct 172
>54377_pvu-miR159:pmrd
Length = 174
Score = 44.1 bits (22), Expect = 5e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 213 tctttggattgaagggagctct 234
||||||||||||||||||||||
Sbjct: 151 tctttggattgaagggagctct 172
>48699_mtr-miR159a:pmrd
Length = 168
Score = 44.1 bits (22), Expect = 5e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 213 tctttggattgaagggagctct 234
||||||||||||||||||||||
Sbjct: 146 tctttggattgaagggagctct 167
>48539_gma-miR159a:pmrd
Length = 214
Score = 44.1 bits (22), Expect = 5e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 213 tctttggattgaagggagctct 234
||||||||||||||||||||||
Sbjct: 173 tctttggattgaagggagctct 194
>48395_bra-miR159a:pmrd
Length = 185
Score = 44.1 bits (22), Expect = 5e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 213 tctttggattgaagggagctct 234
||||||||||||||||||||||
Sbjct: 161 tctttggattgaagggagctct 182
>48339_bna-miR159:pmrd
Length = 183
Score = 44.1 bits (22), Expect = 5e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 213 tctttggattgaagggagctct 234
||||||||||||||||||||||
Sbjct: 159 tctttggattgaagggagctct 180
>46932_ath-miR159b:pmrd
Length = 196
Score = 44.1 bits (22), Expect = 5e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 213 tctttggattgaagggagctct 234
||||||||||||||||||||||
Sbjct: 166 tctttggattgaagggagctct 187
>46931_ath-miR159a:pmrd
Length = 184
Score = 44.1 bits (22), Expect = 5e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 213 tctttggattgaagggagctct 234
||||||||||||||||||||||
Sbjct: 161 tctttggattgaagggagctct 182
>54777_vvi-miR159c:pmrd
Length = 190
Score = 40.1 bits (20), Expect = 8e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 215 tttggattgaagggagctct 234
||||||||||||||||||||
Sbjct: 160 tttggattgaagggagctct 179
>54540_sly-miR159:pmrd
Length = 177
Score = 40.1 bits (20), Expect = 8e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 215 tttggattgaagggagctct 234
||||||||||||||||||||
Sbjct: 157 tttggattgaagggagctct 176
>52093_ptc-miRf10271-akr:pmrd
Length = 174
Score = 40.1 bits (20), Expect = 8e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 215 tttggattgaagggagctct 234
||||||||||||||||||||
Sbjct: 149 tttggattgaagggagctct 168
>51604_ptc-miR159c:pmrd
Length = 183
Score = 40.1 bits (20), Expect = 8e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 215 tttggattgaagggagctct 234
||||||||||||||||||||
Sbjct: 154 tttggattgaagggagctct 173
>51603_ptc-miR159b:pmrd
Length = 187
Score = 40.1 bits (20), Expect = 8e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 215 tttggattgaagggagctct 234
||||||||||||||||||||
Sbjct: 158 tttggattgaagggagctct 177
>51602_ptc-miR159a:pmrd
Length = 183
Score = 40.1 bits (20), Expect = 8e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 215 tttggattgaagggagctct 234
||||||||||||||||||||
Sbjct: 154 tttggattgaagggagctct 173
>48701_mtr-miR159c:pmrd
Length = 44
Score = 40.1 bits (20), Expect = 8e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 215 tttggattgaagggagctct 234
||||||||||||||||||||
Sbjct: 1 tttggattgaagggagctct 20
>48686_ltu-miR159:pmrd
Length = 345
Score = 40.1 bits (20), Expect = 8e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 215 tttggattgaagggagctct 234
||||||||||||||||||||
Sbjct: 1 tttggattgaagggagctct 20