miRNEST 2.0, an integrative microRNA resource :: BLAST
>54632_sof-miR159e:pmrd
Length = 264
Score = 139 bits (70), Expect = 1e-33
Identities = 91/98 (92%)
Strand = Plus / Plus
Query: 7 tgcttggatttgaagcggagctctcttccttccaatgaagggtcgttctgaagggtggta 66
||||||||||||||||||||||| || ||||||||||||| ||||||||||||||||
Sbjct: 5 tgcttggatttgaagcggagctcctatcattccaatgaagggccgttctgaagggtggtt 64
Query: 67 cagctgctcgttcatggttcccactatcctatctcatc 104
| ||||||||||||||||||||||||||||||||||||
Sbjct: 65 ccgctgctcgttcatggttcccactatcctatctcatc 102
Score = 87.7 bits (44), Expect = 4e-18
Identities = 71/80 (88%)
Strand = Plus / Plus
Query: 155 ttgagataggcttgtggtttgcatggccgaggagctgcatcgtcccctctccgaccgctg 214
||||||||||||||||||||||||| |||| |||||||| |||||||| | | |||||
Sbjct: 165 ttgagataggcttgtggtttgcatgaccgaagagctgcaccgtccccttgctggccgctc 224
Query: 215 tttggattgaagggagctct 234
||||||||||| ||||||||
Sbjct: 225 tttggattgaaaggagctct 244
>54629_sof-miR159b:pmrd
Length = 266
Score = 139 bits (70), Expect = 1e-33
Identities = 91/98 (92%)
Strand = Plus / Plus
Query: 7 tgcttggatttgaagcggagctctcttccttccaatgaagggtcgttctgaagggtggta 66
||||||||||||||||||||||| || ||||||||||||| ||||||||||||||||
Sbjct: 6 tgcttggatttgaagcggagctcctatcattccaatgaagggccgttctgaagggtggtt 65
Query: 67 cagctgctcgttcatggttcccactatcctatctcatc 104
| ||||||||||||||||||||||||||||||||||||
Sbjct: 66 ccgctgctcgttcatggttcccactatcctatctcatc 103
Score = 113 bits (57), Expect = 7e-26
Identities = 78/85 (91%)
Strand = Plus / Plus
Query: 155 ttgagataggcttgtggtttgcatggccgaggagctgcatcgtcccctctccgaccgctg 214
||||||||||||||||||||||||| ||||||||||||| |||||||| | | |||||
Sbjct: 167 ttgagataggcttgtggtttgcatgaccgaggagctgcaccgtccccttgctggccgctc 226
Query: 215 tttggattgaagggagctctgcatc 239
|||||||||||||||||||||||||
Sbjct: 227 tttggattgaagggagctctgcatc 251
>54631_sof-miR159d:pmrd
Length = 265
Score = 131 bits (66), Expect = 3e-31
Identities = 90/98 (91%)
Strand = Plus / Plus
Query: 7 tgcttggatttgaagcggagctctcttccttccaatgaagggtcgttctgaagggtggta 66
||||||||||||||||||||||| || ||||||||||||| ||||||||||||| ||
Sbjct: 6 tgcttggatttgaagcggagctcctatcattccaatgaagggccgttctgaagggttgtt 65
Query: 67 cagctgctcgttcatggttcccactatcctatctcatc 104
| ||||||||||||||||||||||||||||||||||||
Sbjct: 66 ccgctgctcgttcatggttcccactatcctatctcatc 103
Score = 95.6 bits (48), Expect = 2e-20
Identities = 75/84 (89%)
Strand = Plus / Plus
Query: 156 tgagataggcttgtggtttgcatggccgaggagctgcatcgtcccctctccgaccgctgt 215
||||||| |||||||||||||||| |||| |||||||| |||||||| | | ||||| |
Sbjct: 167 tgagatacgcttgtggtttgcatgaccgatgagctgcaccgtccccttgctggccgctct 226
Query: 216 ttggattgaagggagctctgcatc 239
||||||||||||||||||||||||
Sbjct: 227 ttggattgaagggagctctgcatc 250
>54628_sof-miR159a:pmrd
Length = 265
Score = 131 bits (66), Expect = 3e-31
Identities = 90/98 (91%)
Strand = Plus / Plus
Query: 7 tgcttggatttgaagcggagctctcttccttccaatgaagggtcgttctgaagggtggta 66
||||||||||||||||||||||| || ||||||||||||| ||||||||||||| ||
Sbjct: 6 tgcttggatttgaagcggagctcctatcattccaatgaagggccgttctgaagggttgtt 65
Query: 67 cagctgctcgttcatggttcccactatcctatctcatc 104
| ||||||||||||||||||||||||||||||||||||
Sbjct: 66 ccgctgctcgttcatggttcccactatcctatctcatc 103
Score = 113 bits (57), Expect = 7e-26
Identities = 78/85 (91%)
Strand = Plus / Plus
Query: 155 ttgagataggcttgtggtttgcatggccgaggagctgcatcgtcccctctccgaccgctg 214
||||||||||||||||||||||||| ||||||||||||| |||||||| | | |||||
Sbjct: 166 ttgagataggcttgtggtttgcatgaccgaggagctgcaccgtccccttgctggccgctc 225
Query: 215 tttggattgaagggagctctgcatc 239
|||||||||||||||||||||||||
Sbjct: 226 tttggattgaagggagctctgcatc 250
>54930_zma-miR159a:pmrd
Length = 246
Score = 111 bits (56), Expect = 3e-25
Identities = 87/96 (90%), Gaps = 1/96 (1%)
Strand = Plus / Plus
Query: 10 ttggatttgaagcggagctctcttccttccaatgaagggtcgttctgaaggg-tggtaca 68
|||| ||||||||||||||| || ||||||||||||||||||| |||||| |||| |
Sbjct: 9 ttgggtttgaagcggagctcctatcattccaatgaagggtcgttccgaagggctggttcc 68
Query: 69 gctgctcgttcatggttcccactatcctatctcatc 104
||||||||||||||||||||||||||||||||||||
Sbjct: 69 gctgctcgttcatggttcccactatcctatctcatc 104
Score = 105 bits (53), Expect = 2e-23
Identities = 77/85 (90%)
Strand = Plus / Plus
Query: 155 ttgagataggcttgtggtttgcatggccgaggagctgcatcgtcccctctccgaccgctg 214
||||||||||||||||||||||||| ||||||||||||| || ||||| | | |||||
Sbjct: 147 ttgagataggcttgtggtttgcatgaccgaggagctgcaccgcccccttgctggccgctc 206
Query: 215 tttggattgaagggagctctgcatc 239
|||||||||||||||||||||||||
Sbjct: 207 tttggattgaagggagctctgcatc 231
>51338_pgl-miR159:pmrd
Length = 226
Score = 107 bits (54), Expect = 4e-24
Identities = 78/86 (90%)
Strand = Plus / Plus
Query: 150 ttggcttgagataggcttgtggtttgcatggccgaggagctgcatcgtcccctctccgac 209
|||||||||||||||||||||| ||||||| ||||||||||||| |||||||| | | |
Sbjct: 141 ttggcttgagataggcttgtggcttgcatgaccgaggagctgcaccgtccccttgctggc 200
Query: 210 cgctgtttggattgaagggagctctg 235
|||| |||||||||||||||||||||
Sbjct: 201 cgctctttggattgaagggagctctg 226
Score = 83.8 bits (42), Expect = 6e-17
Identities = 42/42 (100%)
Strand = Plus / Plus
Query: 62 tggtacagctgctcgttcatggttcccactatcctatctcat 103
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 42 tggtacagctgctcgttcatggttcccactatcctatctcat 83
>54931_zma-miR159b:pmrd
Length = 221
Score = 105 bits (53), Expect = 2e-23
Identities = 82/89 (92%), Gaps = 2/89 (2%)
Strand = Plus / Plus
Query: 153 gcttgagataggcttgtggtttgcatggccgaggagctgcatcgtcccct-ctccgaccg 211
||||||||| ||||||||||||||||| ||||||||||||| |||||||| | |||||
Sbjct: 120 gcttgagatgggcttgtggtttgcatgaccgaggagctgca-cgtccccttcgttgaccg 178
Query: 212 ctgtttggattgaagggagctctgcatct 240
|||||||||||||||||||||||||||||
Sbjct: 179 ctgtttggattgaagggagctctgcatct 207
Score = 85.7 bits (43), Expect = 2e-17
Identities = 61/67 (91%)
Strand = Plus / Plus
Query: 38 ccaatgaagggtcgttctgaagggtggtacagctgctcgttcatggttcccactatccta 97
||||| || ||||| ||||| ||||||||||||||||||||||||||||||||| ||| |
Sbjct: 37 ccaataaacggtcgatctgatgggtggtacagctgctcgttcatggttcccactgtccca 96
Query: 98 tctcatc 104
|||||||
Sbjct: 97 tctcatc 103
>54934_zma-miR159e:pmrd
Length = 203
Score = 97.6 bits (49), Expect = 4e-21
Identities = 77/85 (90%), Gaps = 1/85 (1%)
Strand = Plus / Plus
Query: 153 gcttgagataggcttgtggtttgcatggccgaggagctgcatcgtcccc-tctccgaccg 211
||||||||| ||||||||||||||||| |||||||||||| |||||||| || |||||
Sbjct: 119 gcttgagatgggcttgtggtttgcatgaccgaggagctgcctcgtccccttcgttgaccg 178
Query: 212 ctgtttggattgaagggagctctgc 236
||||||||| |||||||||||||||
Sbjct: 179 ctgtttggagtgaagggagctctgc 203
Score = 85.7 bits (43), Expect = 2e-17
Identities = 61/67 (91%)
Strand = Plus / Plus
Query: 38 ccaatgaagggtcgttctgaagggtggtacagctgctcgttcatggttcccactatccta 97
||||| || ||||| ||||| ||||||||||||||||||||||||||||||||| ||| |
Sbjct: 19 ccaataaacggtcgatctgatgggtggtacagctgctcgttcatggttcccactgtccca 78
Query: 98 tctcatc 104
|||||||
Sbjct: 79 tctcatc 85
>54392_sar-miR159:pmrd
Length = 175
Score = 93.7 bits (47), Expect = 6e-20
Identities = 71/79 (89%)
Strand = Plus / Plus
Query: 157 gagataggcttgtggtttgcatggccgaggagctgcatcgtcccctctccgaccgctgtt 216
||||||||| ||||| ||||||| ||||||||| ||||||||||||| | | ||||| ||
Sbjct: 97 gagataggcctgtggcttgcatgaccgaggagccgcatcgtcccctcgctggccgctctt 156
Query: 217 tggattgaagggagctctg 235
|||||||||||||||||||
Sbjct: 157 tggattgaagggagctctg 175
Score = 77.8 bits (39), Expect = 4e-15
Identities = 39/39 (100%)
Strand = Plus / Plus
Query: 59 gggtggtacagctgctcgttcatggttcccactatccta 97
|||||||||||||||||||||||||||||||||||||||
Sbjct: 40 gggtggtacagctgctcgttcatggttcccactatccta 78
>48657_hvv-miR159b:pmrd
Length = 174
Score = 93.7 bits (47), Expect = 6e-20
Identities = 71/79 (89%)
Strand = Plus / Plus
Query: 157 gagataggcttgtggtttgcatggccgaggagctgcatcgtcccctctccgaccgctgtt 216
||||||||||||||||||||||| |||||||| || ||| ||||| | ||||||||||
Sbjct: 96 gagataggcttgtggtttgcatgatcgaggagccgcttcgatccctcgctgaccgctgtt 155
Query: 217 tggattgaagggagctctg 235
|||||||||||||||||||
Sbjct: 156 tggattgaagggagctctg 174
Score = 61.9 bits (31), Expect = 2e-10
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 67 cagctgctcgttcatggttcccactatcctatctc 101
|||||||| ||||||||||||||||||||||||||
Sbjct: 47 cagctgcttgttcatggttcccactatcctatctc 81
>54673_tae-miR159a:pmrd
Length = 177
Score = 91.7 bits (46), Expect = 2e-19
Identities = 73/82 (89%)
Strand = Plus / Plus
Query: 157 gagataggcttgtggtttgcatggccgaggagctgcatcgtcccctctccgaccgctgtt 216
|||| |||| ||||||||||||| ||||||||| || ||| ||||| | ||||||||||
Sbjct: 96 gagagaggcctgtggtttgcatgaccgaggagccgcttcgatccctcgctgaccgctgtt 155
Query: 217 tggattgaagggagctctgcat 238
||||||||||||||||||||||
Sbjct: 156 tggattgaagggagctctgcat 177
Score = 69.9 bits (35), Expect = 9e-13
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 67 cagctgctcgttcatggttcccactatcctatctc 101
|||||||||||||||||||||||||||||||||||
Sbjct: 48 cagctgctcgttcatggttcccactatcctatctc 82
>48820_osa-miR159b:pmrd
Length = 188
Score = 85.7 bits (43), Expect = 2e-17
Identities = 76/87 (87%)
Strand = Plus / Plus
Query: 17 tgaagcggagctctcttccttccaatgaagggtcgttctgaagggtggtacagctgctcg 76
||||| ||||||| ||| |||||||||| ||| ||||||||||| |||||||||| |
Sbjct: 6 tgaagtggagctcctttcgttccaatgaaaggtttatctgaagggtgatacagctgcttg 65
Query: 77 ttcatggttcccactatcctatctcat 103
||||||||||||||||| |||||||||
Sbjct: 66 ttcatggttcccactattctatctcat 92
Score = 73.8 bits (37), Expect = 6e-14
Identities = 76/89 (85%)
Strand = Plus / Plus
Query: 157 gagataggcttgtggtttgcatggccgaggagctgcatcgtcccctctccgaccgctgtt 216
||||||||||||||||||||||| || |||||| | ||| | ||| | |||| || ||
Sbjct: 100 gagataggcttgtggtttgcatgaccaaggagccgaatcaactccttgctgaccactctt 159
Query: 217 tggattgaagggagctctgcatctcgatc 245
|||||||||||||||||||||||| ||||
Sbjct: 160 tggattgaagggagctctgcatcttgatc 188
>48656_hvv-miR159a:pmrd
Length = 303
Score = 54.0 bits (27), Expect = 5e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 215 tttggattgaagggagctctgcatctcgatc 245
|||||||||||||||||||||||||| ||||
Sbjct: 1 tttggattgaagggagctctgcatcttgatc 31
>54674_tae-miR159b:pmrd
Length = 255
Score = 52.0 bits (26), Expect = 2e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 215 tttggattgaagggagctctgcatct 240
||||||||||||||||||||||||||
Sbjct: 230 tttggattgaagggagctctgcatct 255
>48819_osa-miR159a:pmrd
Length = 272
Score = 52.0 bits (26), Expect = 2e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 215 tttggattgaagggagctctgcatct 240
||||||||||||||||||||||||||
Sbjct: 242 tttggattgaagggagctctgcatct 267
>48796_oru-miR159:pmrd
Length = 274
Score = 52.0 bits (26), Expect = 2e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 215 tttggattgaagggagctctgcatct 240
||||||||||||||||||||||||||
Sbjct: 242 tttggattgaagggagctctgcatct 267
>54937_zma-miR159m:pmrd
Length = 457
Score = 50.1 bits (25), Expect = 8e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 215 tttggattgaagggagctctgcatc 239
|||||||||||||||||||||||||
Sbjct: 1 tttggattgaagggagctctgcatc 25
>54653_spr-miR159:pmrd
Length = 392
Score = 50.1 bits (25), Expect = 8e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 215 tttggattgaagggagctctgcatc 239
|||||||||||||||||||||||||
Sbjct: 1 tttggattgaagggagctctgcatc 25
>46932_ath-miR159b:pmrd
Length = 196
Score = 46.1 bits (23), Expect = 1e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 215 tttggattgaagggagctctgcatctc 241
|||||||||||||||||||| ||||||
Sbjct: 168 tttggattgaagggagctcttcatctc 194
>54777_vvi-miR159c:pmrd
Length = 190
Score = 44.1 bits (22), Expect = 5e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 213 tgtttggattgaagggagctct 234
||||||||||||||||||||||
Sbjct: 158 tgtttggattgaagggagctct 179
>48701_mtr-miR159c:pmrd
Length = 44
Score = 44.1 bits (22), Expect = 5e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 215 tttggattgaagggagctctgcatct 240
|||||||||||||||||||| |||||
Sbjct: 1 tttggattgaagggagctctacatct 26
>48825_osa-miR159m:pmrd
Length = 249
Score = 42.1 bits (21), Expect = 2e-04
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 159 gataggcttgtggtttgcatggccgaggagctgcatc 195
||||||||| ||| ||||||| || ||||||||||||
Sbjct: 174 gataggcttatggcttgcatgccccaggagctgcatc 210
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 215 tttggattgaagggagctctg 235
|||||||||||||||||||||
Sbjct: 229 tttggattgaagggagctctg 249
>48728_mtr-miR319b:pmrd
Length = 42
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 216 ttggattgaagggagctctgcatct 240
||||||||||||||||||| |||||
Sbjct: 1 ttggattgaagggagctctacatct 25
>54540_sly-miR159:pmrd
Length = 177
Score = 40.1 bits (20), Expect = 8e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 215 tttggattgaagggagctct 234
||||||||||||||||||||
Sbjct: 157 tttggattgaagggagctct 176
>54378_pvu-miR159:pmrd
Length = 174
Score = 40.1 bits (20), Expect = 8e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 215 tttggattgaagggagctct 234
||||||||||||||||||||
Sbjct: 153 tttggattgaagggagctct 172
>54377_pvu-miR159:pmrd
Length = 174
Score = 40.1 bits (20), Expect = 8e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 215 tttggattgaagggagctct 234
||||||||||||||||||||
Sbjct: 153 tttggattgaagggagctct 172
>52093_ptc-miRf10271-akr:pmrd
Length = 174
Score = 40.1 bits (20), Expect = 8e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 215 tttggattgaagggagctct 234
||||||||||||||||||||
Sbjct: 149 tttggattgaagggagctct 168
>51604_ptc-miR159c:pmrd
Length = 183
Score = 40.1 bits (20), Expect = 8e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 215 tttggattgaagggagctct 234
||||||||||||||||||||
Sbjct: 154 tttggattgaagggagctct 173
>51603_ptc-miR159b:pmrd
Length = 187
Score = 40.1 bits (20), Expect = 8e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 215 tttggattgaagggagctct 234
||||||||||||||||||||
Sbjct: 158 tttggattgaagggagctct 177
>51602_ptc-miR159a:pmrd
Length = 183
Score = 40.1 bits (20), Expect = 8e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 215 tttggattgaagggagctct 234
||||||||||||||||||||
Sbjct: 154 tttggattgaagggagctct 173
>48699_mtr-miR159a:pmrd
Length = 168
Score = 40.1 bits (20), Expect = 8e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 215 tttggattgaagggagctct 234
||||||||||||||||||||
Sbjct: 148 tttggattgaagggagctct 167
>48686_ltu-miR159:pmrd
Length = 345
Score = 40.1 bits (20), Expect = 8e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 215 tttggattgaagggagctct 234
||||||||||||||||||||
Sbjct: 1 tttggattgaagggagctct 20
>48539_gma-miR159a:pmrd
Length = 214
Score = 40.1 bits (20), Expect = 8e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 215 tttggattgaagggagctct 234
||||||||||||||||||||
Sbjct: 175 tttggattgaagggagctct 194
>48395_bra-miR159a:pmrd
Length = 185
Score = 40.1 bits (20), Expect = 8e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 215 tttggattgaagggagctct 234
||||||||||||||||||||
Sbjct: 163 tttggattgaagggagctct 182
>48339_bna-miR159:pmrd
Length = 183
Score = 40.1 bits (20), Expect = 8e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 215 tttggattgaagggagctct 234
||||||||||||||||||||
Sbjct: 161 tttggattgaagggagctct 180
>46933_ath-miR159c:pmrd
Length = 225
Score = 40.1 bits (20), Expect = 8e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 214 gtttggattgaagggagctc 233
||||||||||||||||||||
Sbjct: 194 gtttggattgaagggagctc 213
>46931_ath-miR159a:pmrd
Length = 184
Score = 40.1 bits (20), Expect = 8e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 215 tttggattgaagggagctct 234
||||||||||||||||||||
Sbjct: 163 tttggattgaagggagctct 182
