miRNEST 2.0, an integrative microRNA resource :: BLAST
>51338_pgl-miR159:pmrd
Length = 226
Score = 149 bits (75), Expect = 1e-36
Identities = 85/87 (97%), Gaps = 1/87 (1%)
Strand = Plus / Plus
Query: 140 ttggcttgagataggctttgtggcttgcatgaccgaggagctgcaccgttcccttgctgg 199
|||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||
Sbjct: 141 ttggcttgagataggctt-gtggcttgcatgaccgaggagctgcaccgtccccttgctgg 199
Query: 200 ccgctctttggattgaagggagctctg 226
|||||||||||||||||||||||||||
Sbjct: 200 ccgctctttggattgaagggagctctg 226
Score = 117 bits (59), Expect = 4e-27
Identities = 77/83 (92%)
Strand = Plus / Plus
Query: 6 cggagctcctatcattccaatgaagggtcctttcgctgggttggtacagctgctcgttca 65
|||||||||||||||||||||||| ||| ||| ||||||||||||||||||||||||
Sbjct: 1 cggagctcctatcattccaatgaaaggttgtttttgtgggttggtacagctgctcgttca 60
Query: 66 tggttcccactatcctatctcat 88
|||||||||||||||||||||||
Sbjct: 61 tggttcccactatcctatctcat 83
>54629_sof-miR159b:pmrd
Length = 266
Score = 133 bits (67), Expect = 7e-32
Identities = 80/83 (96%), Gaps = 1/83 (1%)
Strand = Plus / Plus
Query: 145 ttgagataggctttgtggcttgcatgaccgaggagctgcaccgttcccttgctggccgct 204
||||||||||||| |||| ||||||||||||||||||||||||| |||||||||||||||
Sbjct: 167 ttgagataggctt-gtggtttgcatgaccgaggagctgcaccgtccccttgctggccgct 225
Query: 205 ctttggattgaagggagctctgc 227
|||||||||||||||||||||||
Sbjct: 226 ctttggattgaagggagctctgc 248
Score = 95.6 bits (48), Expect = 1e-20
Identities = 79/88 (89%), Gaps = 1/88 (1%)
Strand = Plus / Plus
Query: 2 gaagcggagctcctatcattccaatgaagggtcctttcgctgggttggtacagctgctcg 61
||||||||||||||||||||||||||||||| | || | |||| ||| | ||||||||
Sbjct: 17 gaagcggagctcctatcattccaatgaagggccgttctgaagggt-ggttccgctgctcg 75
Query: 62 ttcatggttcccactatcctatctcatc 89
||||||||||||||||||||||||||||
Sbjct: 76 ttcatggttcccactatcctatctcatc 103
>54628_sof-miR159a:pmrd
Length = 265
Score = 133 bits (67), Expect = 7e-32
Identities = 80/83 (96%), Gaps = 1/83 (1%)
Strand = Plus / Plus
Query: 145 ttgagataggctttgtggcttgcatgaccgaggagctgcaccgttcccttgctggccgct 204
||||||||||||| |||| ||||||||||||||||||||||||| |||||||||||||||
Sbjct: 166 ttgagataggctt-gtggtttgcatgaccgaggagctgcaccgtccccttgctggccgct 224
Query: 205 ctttggattgaagggagctctgc 227
|||||||||||||||||||||||
Sbjct: 225 ctttggattgaagggagctctgc 247
Score = 95.6 bits (48), Expect = 1e-20
Identities = 79/88 (89%), Gaps = 1/88 (1%)
Strand = Plus / Plus
Query: 2 gaagcggagctcctatcattccaatgaagggtcctttcgctgggttggtacagctgctcg 61
||||||||||||||||||||||||||||||| | || | |||||| | | ||||||||
Sbjct: 17 gaagcggagctcctatcattccaatgaagggccgttctgaagggttgttcc-gctgctcg 75
Query: 62 ttcatggttcccactatcctatctcatc 89
||||||||||||||||||||||||||||
Sbjct: 76 ttcatggttcccactatcctatctcatc 103
>54930_zma-miR159a:pmrd
Length = 246
Score = 125 bits (63), Expect = 2e-29
Identities = 79/83 (95%), Gaps = 1/83 (1%)
Strand = Plus / Plus
Query: 145 ttgagataggctttgtggcttgcatgaccgaggagctgcaccgttcccttgctggccgct 204
||||||||||||| |||| |||||||||||||||||||||||| |||||||||||||||
Sbjct: 147 ttgagataggctt-gtggtttgcatgaccgaggagctgcaccgcccccttgctggccgct 205
Query: 205 ctttggattgaagggagctctgc 227
|||||||||||||||||||||||
Sbjct: 206 ctttggattgaagggagctctgc 228
Score = 119 bits (60), Expect = 1e-27
Identities = 81/88 (92%)
Strand = Plus / Plus
Query: 2 gaagcggagctcctatcattccaatgaagggtcctttcgctgggttggtacagctgctcg 61
||||||||||||||||||||||||||||||||| || || ||| |||| | ||||||||
Sbjct: 17 gaagcggagctcctatcattccaatgaagggtcgttccgaagggctggttccgctgctcg 76
Query: 62 ttcatggttcccactatcctatctcatc 89
||||||||||||||||||||||||||||
Sbjct: 77 ttcatggttcccactatcctatctcatc 104
>54631_sof-miR159d:pmrd
Length = 265
Score = 117 bits (59), Expect = 4e-27
Identities = 68/71 (95%)
Strand = Plus / Plus
Query: 157 ttgtggcttgcatgaccgaggagctgcaccgttcccttgctggccgctctttggattgaa 216
|||||| |||||||||||| |||||||||||| |||||||||||||||||||||||||||
Sbjct: 177 ttgtggtttgcatgaccgatgagctgcaccgtccccttgctggccgctctttggattgaa 236
Query: 217 gggagctctgc 227
|||||||||||
Sbjct: 237 gggagctctgc 247
Score = 95.6 bits (48), Expect = 1e-20
Identities = 79/88 (89%), Gaps = 1/88 (1%)
Strand = Plus / Plus
Query: 2 gaagcggagctcctatcattccaatgaagggtcctttcgctgggttggtacagctgctcg 61
||||||||||||||||||||||||||||||| | || | |||||| | | ||||||||
Sbjct: 17 gaagcggagctcctatcattccaatgaagggccgttctgaagggttgttcc-gctgctcg 75
Query: 62 ttcatggttcccactatcctatctcatc 89
||||||||||||||||||||||||||||
Sbjct: 76 ttcatggttcccactatcctatctcatc 103
>54632_sof-miR159e:pmrd
Length = 264
Score = 113 bits (57), Expect = 6e-26
Identities = 76/81 (93%), Gaps = 1/81 (1%)
Strand = Plus / Plus
Query: 145 ttgagataggctttgtggcttgcatgaccgaggagctgcaccgttcccttgctggccgct 204
||||||||||||| |||| |||||||||||| |||||||||||| |||||||||||||||
Sbjct: 165 ttgagataggctt-gtggtttgcatgaccgaagagctgcaccgtccccttgctggccgct 223
Query: 205 ctttggattgaagggagctct 225
|||||||||||| ||||||||
Sbjct: 224 ctttggattgaaaggagctct 244
Score = 95.6 bits (48), Expect = 1e-20
Identities = 79/88 (89%), Gaps = 1/88 (1%)
Strand = Plus / Plus
Query: 2 gaagcggagctcctatcattccaatgaagggtcctttcgctgggttggtacagctgctcg 61
||||||||||||||||||||||||||||||| | || | |||| ||| | ||||||||
Sbjct: 16 gaagcggagctcctatcattccaatgaagggccgttctgaagggt-ggttccgctgctcg 74
Query: 62 ttcatggttcccactatcctatctcatc 89
||||||||||||||||||||||||||||
Sbjct: 75 ttcatggttcccactatcctatctcatc 102
>54392_sar-miR159:pmrd
Length = 175
Score = 105 bits (53), Expect = 1e-23
Identities = 65/69 (94%)
Strand = Plus / Plus
Query: 158 tgtggcttgcatgaccgaggagctgcaccgttcccttgctggccgctctttggattgaag 217
||||||||||||||||||||||| ||| ||| |||| |||||||||||||||||||||||
Sbjct: 107 tgtggcttgcatgaccgaggagccgcatcgtcccctcgctggccgctctttggattgaag 166
Query: 218 ggagctctg 226
|||||||||
Sbjct: 167 ggagctctg 175
Score = 81.8 bits (41), Expect = 2e-16
Identities = 69/77 (89%), Gaps = 1/77 (1%)
Strand = Plus / Plus
Query: 7 ggagctcctatcattccaatgaagggtcctt-tcgctgggttggtacagctgctcgttca 65
||||||||||||||||||||||| |||| | | | ||| |||||||||||||||||||
Sbjct: 2 ggagctcctatcattccaatgaaaggtcttgctagaaggggtggtacagctgctcgttca 61
Query: 66 tggttcccactatccta 82
|||||||||||||||||
Sbjct: 62 tggttcccactatccta 78
>54673_tae-miR159a:pmrd
Length = 177
Score = 87.7 bits (44), Expect = 3e-18
Identities = 71/80 (88%)
Strand = Plus / Plus
Query: 7 ggagctcctatcattccaatgaagggtcctttcgctgggttggtacagctgctcgttcat 66
|||||||||||||||||||||||||||| | ||||| || |||||||||||||||
Sbjct: 3 ggagctcctatcattccaatgaagggtctaccggaagggtttgtgcagctgctcgttcat 62
Query: 67 ggttcccactatcctatctc 86
||||||||||||||||||||
Sbjct: 63 ggttcccactatcctatctc 82
Score = 75.8 bits (38), Expect = 1e-14
Identities = 62/70 (88%)
Strand = Plus / Plus
Query: 158 tgtggcttgcatgaccgaggagctgcaccgttcccttgctggccgctctttggattgaag 217
||||| ||||||||||||||||| || || ||||| |||| ||||| ||||||||||||
Sbjct: 106 tgtggtttgcatgaccgaggagccgcttcgatccctcgctgaccgctgtttggattgaag 165
Query: 218 ggagctctgc 227
||||||||||
Sbjct: 166 ggagctctgc 175
>48657_hvv-miR159b:pmrd
Length = 174
Score = 79.8 bits (40), Expect = 8e-16
Identities = 70/80 (87%)
Strand = Plus / Plus
Query: 7 ggagctcctatcattccaatgaagggtcctttcgctgggttggtacagctgctcgttcat 66
|||||||||||||||||||||||||||| | ||||| || |||||||| ||||||
Sbjct: 2 ggagctcctatcattccaatgaagggtctaccggaagggtttgtgcagctgcttgttcat 61
Query: 67 ggttcccactatcctatctc 86
||||||||||||||||||||
Sbjct: 62 ggttcccactatcctatctc 81
Score = 71.9 bits (36), Expect = 2e-13
Identities = 70/80 (87%), Gaps = 1/80 (1%)
Strand = Plus / Plus
Query: 147 gagataggctttgtggcttgcatgaccgaggagctgcaccgttcccttgctggccgctct 206
||||||||||| |||| |||||||| |||||||| || || ||||| |||| ||||| |
Sbjct: 96 gagataggctt-gtggtttgcatgatcgaggagccgcttcgatccctcgctgaccgctgt 154
Query: 207 ttggattgaagggagctctg 226
||||||||||||||||||||
Sbjct: 155 ttggattgaagggagctctg 174
>54931_zma-miR159b:pmrd
Length = 221
Score = 75.8 bits (38), Expect = 1e-14
Identities = 77/86 (89%), Gaps = 3/86 (3%)
Strand = Plus / Plus
Query: 143 gcttgagataggctttgtggcttgcatgaccgaggagctgcaccgttccctt-gctggcc 201
||||||||| ||||| |||| ||||||||||||||||||||| ||| ||||| | || ||
Sbjct: 120 gcttgagatgggctt-gtggtttgcatgaccgaggagctgca-cgtccccttcgttgacc 177
Query: 202 gctctttggattgaagggagctctgc 227
||| ||||||||||||||||||||||
Sbjct: 178 gctgtttggattgaagggagctctgc 203
Score = 69.9 bits (35), Expect = 8e-13
Identities = 41/43 (95%)
Strand = Plus / Plus
Query: 47 tggtacagctgctcgttcatggttcccactatcctatctcatc 89
|||||||||||||||||||||||||||||| ||| ||||||||
Sbjct: 61 tggtacagctgctcgttcatggttcccactgtcccatctcatc 103
>54934_zma-miR159e:pmrd
Length = 203
Score = 69.9 bits (35), Expect = 8e-13
Identities = 41/43 (95%)
Strand = Plus / Plus
Query: 47 tggtacagctgctcgttcatggttcccactatcctatctcatc 89
|||||||||||||||||||||||||||||| ||| ||||||||
Sbjct: 43 tggtacagctgctcgttcatggttcccactgtcccatctcatc 85
Score = 67.9 bits (34), Expect = 3e-12
Identities = 75/86 (87%), Gaps = 2/86 (2%)
Strand = Plus / Plus
Query: 143 gcttgagataggctttgtggcttgcatgaccgaggagctgcaccgttccctt-gctggcc 201
||||||||| ||||| |||| |||||||||||||||||||| ||| ||||| | || ||
Sbjct: 119 gcttgagatgggctt-gtggtttgcatgaccgaggagctgcctcgtccccttcgttgacc 177
Query: 202 gctctttggattgaagggagctctgc 227
||| |||||| |||||||||||||||
Sbjct: 178 gctgtttggagtgaagggagctctgc 203
>48820_osa-miR159b:pmrd
Length = 188
Score = 61.9 bits (31), Expect = 2e-10
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 50 tacagctgctcgttcatggttcccactatcctatctcat 88
|||||||||| |||||||||||||||||| |||||||||
Sbjct: 54 tacagctgcttgttcatggttcccactattctatctcat 92
Score = 58.0 bits (29), Expect = 3e-09
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 191 ccttgctggccgctctttggattgaagggagctctgc 227
|||||||| || |||||||||||||||||||||||||
Sbjct: 143 ccttgctgaccactctttggattgaagggagctctgc 179
>54674_tae-miR159b:pmrd
Length = 255
Score = 50.1 bits (25), Expect = 8e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 203 ctctttggattgaagggagctctgc 227
|||||||||||||||||||||||||
Sbjct: 227 ctctttggattgaagggagctctgc 251
>48819_osa-miR159a:pmrd
Length = 272
Score = 50.1 bits (25), Expect = 8e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 203 ctctttggattgaagggagctctgc 227
|||||||||||||||||||||||||
Sbjct: 239 ctctttggattgaagggagctctgc 263
>48796_oru-miR159:pmrd
Length = 274
Score = 50.1 bits (25), Expect = 8e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 203 ctctttggattgaagggagctctgc 227
|||||||||||||||||||||||||
Sbjct: 239 ctctttggattgaagggagctctgc 263
>48825_osa-miR159m:pmrd
Length = 249
Score = 48.1 bits (24), Expect = 3e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 203 ctctttggattgaagggagctctg 226
||||||||||||||||||||||||
Sbjct: 226 ctctttggattgaagggagctctg 249
>54937_zma-miR159m:pmrd
Length = 457
Score = 44.1 bits (22), Expect = 5e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 206 tttggattgaagggagctctgc 227
||||||||||||||||||||||
Sbjct: 1 tttggattgaagggagctctgc 22
>54653_spr-miR159:pmrd
Length = 392
Score = 44.1 bits (22), Expect = 5e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 206 tttggattgaagggagctctgc 227
||||||||||||||||||||||
Sbjct: 1 tttggattgaagggagctctgc 22
>54378_pvu-miR159:pmrd
Length = 174
Score = 44.1 bits (22), Expect = 5e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 204 tctttggattgaagggagctct 225
||||||||||||||||||||||
Sbjct: 151 tctttggattgaagggagctct 172
>54377_pvu-miR159:pmrd
Length = 174
Score = 44.1 bits (22), Expect = 5e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 204 tctttggattgaagggagctct 225
||||||||||||||||||||||
Sbjct: 151 tctttggattgaagggagctct 172
>48699_mtr-miR159a:pmrd
Length = 168
Score = 44.1 bits (22), Expect = 5e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 204 tctttggattgaagggagctct 225
||||||||||||||||||||||
Sbjct: 146 tctttggattgaagggagctct 167
>48656_hvv-miR159a:pmrd
Length = 303
Score = 44.1 bits (22), Expect = 5e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 206 tttggattgaagggagctctgc 227
||||||||||||||||||||||
Sbjct: 1 tttggattgaagggagctctgc 22
>48539_gma-miR159a:pmrd
Length = 214
Score = 44.1 bits (22), Expect = 5e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 204 tctttggattgaagggagctct 225
||||||||||||||||||||||
Sbjct: 173 tctttggattgaagggagctct 194
>48395_bra-miR159a:pmrd
Length = 185
Score = 44.1 bits (22), Expect = 5e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 204 tctttggattgaagggagctct 225
||||||||||||||||||||||
Sbjct: 161 tctttggattgaagggagctct 182
>48339_bna-miR159:pmrd
Length = 183
Score = 44.1 bits (22), Expect = 5e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 204 tctttggattgaagggagctct 225
||||||||||||||||||||||
Sbjct: 159 tctttggattgaagggagctct 180
>46932_ath-miR159b:pmrd
Length = 196
Score = 44.1 bits (22), Expect = 5e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 204 tctttggattgaagggagctct 225
||||||||||||||||||||||
Sbjct: 166 tctttggattgaagggagctct 187
>46931_ath-miR159a:pmrd
Length = 184
Score = 44.1 bits (22), Expect = 5e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 204 tctttggattgaagggagctct 225
||||||||||||||||||||||
Sbjct: 161 tctttggattgaagggagctct 182
>54777_vvi-miR159c:pmrd
Length = 190
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 206 tttggattgaagggagctct 225
||||||||||||||||||||
Sbjct: 160 tttggattgaagggagctct 179
>54540_sly-miR159:pmrd
Length = 177
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 206 tttggattgaagggagctct 225
||||||||||||||||||||
Sbjct: 157 tttggattgaagggagctct 176
>52093_ptc-miRf10271-akr:pmrd
Length = 174
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 206 tttggattgaagggagctct 225
||||||||||||||||||||
Sbjct: 149 tttggattgaagggagctct 168
>51604_ptc-miR159c:pmrd
Length = 183
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 206 tttggattgaagggagctct 225
||||||||||||||||||||
Sbjct: 154 tttggattgaagggagctct 173
>51603_ptc-miR159b:pmrd
Length = 187
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 206 tttggattgaagggagctct 225
||||||||||||||||||||
Sbjct: 158 tttggattgaagggagctct 177
>51602_ptc-miR159a:pmrd
Length = 183
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 206 tttggattgaagggagctct 225
||||||||||||||||||||
Sbjct: 154 tttggattgaagggagctct 173
>48701_mtr-miR159c:pmrd
Length = 44
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 206 tttggattgaagggagctct 225
||||||||||||||||||||
Sbjct: 1 tttggattgaagggagctct 20
>48686_ltu-miR159:pmrd
Length = 345
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 206 tttggattgaagggagctct 225
||||||||||||||||||||
Sbjct: 1 tttggattgaagggagctct 20
