miRNEST 2.0, an integrative microRNA resource :: BLAST
>54439_sbi-miR169c:pmrd
Length = 126
Score = 139 bits (70), Expect = 9e-34
Identities = 106/118 (89%)
Strand = Plus / Plus
Query: 49 agccagcctttggtagtcaaggatgacttgcctacatggccttgtgagtcccggttgcat 108
|||| ||||||||||| ||||||||||||||||||| ||||||| |||| ||||||||||
Sbjct: 8 agcctgcctttggtagccaaggatgacttgcctacacggccttgcgagttccggttgcat 67
Query: 109 agccggttcagctaggtctgtgggcggtcaccttggctagtctgagtggcttttgcct 166
||| |||||| | ||| |||||||||||||||||||||| |||||||||| ||||||
Sbjct: 68 ggccagttcagttgggtttgtgggcggtcaccttggctagcctgagtggctcttgcct 125
>54440_sbi-miR169d:pmrd
Length = 125
Score = 111 bits (56), Expect = 2e-25
Identities = 86/96 (89%)
Strand = Plus / Plus
Query: 49 agccagcctttggtagtcaaggatgacttgcctacatggccttgtgagtcccggttgcat 108
|||| ||||||||||| ||||||||||||||||||||||| ||| |||| ||||||||||
Sbjct: 8 agcctgcctttggtagccaaggatgacttgcctacatggcattgcgagttccggttgcat 67
Query: 109 agccggttcagctaggtctgtgggcggtcaccttgg 144
||| |||||||| || ||||||||||||||||||
Sbjct: 68 ggccagttcagctgagtttgtgggcggtcaccttgg 103
>55009_zma-miR169g:pmrd
Length = 140
Score = 56.0 bits (28), Expect = 1e-08
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 48 tagccagcctttggtagtcaaggatgacttgcctacatgg 87
||||| |||| |||||| ||||||||||||||||||||||
Sbjct: 7 tagcctgcctctggtagccaaggatgacttgcctacatgg 46
Score = 56.0 bits (28), Expect = 1e-08
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 127 tgtgggcggtcaccttggctagtctgagtggcttttgcct 166
||||||||||| |||||||||| |||||||||| ||||||
Sbjct: 100 tgtgggcggtctccttggctagcctgagtggctcttgcct 139
>48355_bna-miR169f:pmrd
Length = 201
Score = 46.1 bits (23), Expect = 1e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 57 tttggtagtcaaggatgacttgcctac 83
|||||||| ||||||||||||||||||
Sbjct: 26 tttggtagccaaggatgacttgcctac 52
>48353_bna-miR169d:pmrd
Length = 220
Score = 46.1 bits (23), Expect = 1e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 57 tttggtagtcaaggatgacttgcctac 83
|||||||| ||||||||||||||||||
Sbjct: 35 tttggtagccaaggatgacttgcctac 61
>51675_ptc-miR169r:pmrd
Length = 119
Score = 44.1 bits (22), Expect = 4e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 57 tttggtagtcaaggatgacttgccta 82
|||||||| |||||||||||||||||
Sbjct: 6 tttggtagccaaggatgacttgccta 31
>48354_bna-miR169e:pmrd
Length = 276
Score = 44.1 bits (22), Expect = 4e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 57 tttggtagtcaaggatgacttgccta 82
|||||||| |||||||||||||||||
Sbjct: 246 tttggtagccaaggatgacttgccta 271
>48352_bna-miR169c:pmrd
Length = 176
Score = 44.1 bits (22), Expect = 4e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 57 tttggtagtcaaggatgacttgccta 82
|||||||| |||||||||||||||||
Sbjct: 21 tttggtagccaaggatgacttgccta 46
>54548_sly-miR169b:pmrd
Length = 205
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 57 tttggtagtcaaggatgacttgcct 81
|||||||| ||||||||||||||||
Sbjct: 166 tttggtagccaaggatgacttgcct 190
>52726_ptc-miRf10904-akr:pmrd
Length = 132
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 57 tttggtagtcaaggatgacttgcct 81
|||||||| ||||||||||||||||
Sbjct: 10 tttggtagccaaggatgacttgcct 34
>51670_ptc-miR169m:pmrd
Length = 119
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 57 tttggtagtcaaggatgacttgcct 81
|||||||| ||||||||||||||||
Sbjct: 6 tttggtagccaaggatgacttgcct 30
>51668_ptc-miR169k:pmrd
Length = 203
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 57 tttggtagtcaaggatgacttgcct 81
|||||||| ||||||||||||||||
Sbjct: 6 tttggtagccaaggatgacttgcct 30
>51666_ptc-miR169i:pmrd
Length = 123
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 57 tttggtagtcaaggatgacttgcct 81
|||||||| ||||||||||||||||
Sbjct: 6 tttggtagccaaggatgacttgcct 30
>48890_osa-miR169o:pmrd
Length = 173
Score = 42.1 bits (21), Expect = 2e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 55 cctttggtagtcaaggatgacttgcctac 83
|||||||||| |||| |||||||||||||
Sbjct: 4 cctttggtagccaagaatgacttgcctac 32
>48882_osa-miR169g:pmrd
Length = 126
Score = 42.1 bits (21), Expect = 2e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 54 gcctttggtagtcaaggatgacttgccta 82
|||| |||||| |||||||||||||||||
Sbjct: 3 gcctctggtagccaaggatgacttgccta 31
>48487_ghb-miR169a:pmrd
Length = 189
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 57 tttggtagtcaaggatgacttgcct 81
|||||||| ||||||||||||||||
Sbjct: 45 tttggtagccaaggatgacttgcct 69
>46973_ath-miR169m:pmrd
Length = 212
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 57 tttggtagtcaaggatgacttgcct 81
|||||||| ||||||||||||||||
Sbjct: 37 tttggtagccaaggatgacttgcct 61
>46971_ath-miR169k:pmrd
Length = 213
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 57 tttggtagtcaaggatgacttgcct 81
|||||||| ||||||||||||||||
Sbjct: 38 tttggtagccaaggatgacttgcct 62
>46969_ath-miR169i:pmrd
Length = 206
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 57 tttggtagtcaaggatgacttgcct 81
|||||||| ||||||||||||||||
Sbjct: 35 tttggtagccaaggatgacttgcct 59
>54827_vvi-miR169y:pmrd
Length = 248
Score = 40.1 bits (20), Expect = 7e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 57 tttggtagtcaaggatgacttgcctaca 84
|||||||| ||||||||||||||||||
Sbjct: 6 tttggtagcgaaggatgacttgcctaca 33
>54826_vvi-miR169x:pmrd
Length = 125
Score = 40.1 bits (20), Expect = 7e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 59 tggtagtcaaggatgacttgccta 82
|||||| |||||||||||||||||
Sbjct: 9 tggtagccaaggatgacttgccta 32
>51680_ptc-miR169w:pmrd
Length = 109
Score = 40.1 bits (20), Expect = 7e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 57 tttggtagtcaaggatgacttgcc 80
|||||||| |||||||||||||||
Sbjct: 5 tttggtagccaaggatgacttgcc 28
>51679_ptc-miR169v:pmrd
Length = 110
Score = 40.1 bits (20), Expect = 7e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 57 tttggtagtcaaggatgacttgcc 80
|||||||| |||||||||||||||
Sbjct: 5 tttggtagccaaggatgacttgcc 28
>48889_osa-miR169n:pmrd
Length = 177
Score = 40.1 bits (20), Expect = 7e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 55 cctttggtagtcaaggatgacttgccta 82
|||||||||| |||| ||||||||||||
Sbjct: 4 cctttggtagccaagaatgacttgccta 31
