miRNEST 2.0, an integrative microRNA resource

miRNEST 2.0, an integrative microRNA resource :: BLAST

BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>52848_ptc-miRf11026-akr:pmrd
          Length = 124

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 14  gaggtgcaggtgcaggtgcaggtg 37
           ||||||||||||||||||||||||
Sbjct: 96  gaggtgcaggtgcaggtgcaggtg 119

>52847_ptc-miRf11025-akr:pmrd
          Length = 138

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 14  gaggtgcaggtgcaggtgcaggtg 37
           ||||||||||||||||||||||||
Sbjct: 104 gaggtgcaggtgcaggtgcaggtg 127

>51904_ptc-miRf10082-akr:pmrd
          Length = 118

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 14  gaggtgcaggtgcaggtgcaggtg 37
           ||||||||||||||||||||||||
Sbjct: 93  gaggtgcaggtgcaggtgcaggtg 116

>51806_ptc-miR530a:pmrd
          Length = 144

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 14  gaggtgcaggtgcaggtgcaggtg 37
           ||||||||||||||||||||||||
Sbjct: 107 gaggtgcaggtgcaggtgcaggtg 130

>53341_ptc-miRf11519-akr:pmrd
          Length = 152

 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 14  gaggtgcaggtgcaggtgcaggtg 37
           |||||||||||||| |||||||||
Sbjct: 124 gaggtgcaggtgcaagtgcaggtg 147

>51807_ptc-miR530b:pmrd
          Length = 172

 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 14  gaggtgcaggtgcaggtgcaggtg 37
           |||||||||||||| |||||||||
Sbjct: 135 gaggtgcaggtgcaagtgcaggtg 158