miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>52339_ptc-miRf10517-akr:pmrd
          Length = 164

 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 84  aagttcaagaaagccgtggaaaa 106
           |||||||||||||||||||||||
Sbjct: 28  aagttcaagaaagccgtggaaaa 6



 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 10  tttcccacggctttcttgagctt 32
           |||||||||||||||||||||||
Sbjct: 159 tttcccacggctttcttgagctt 137



 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 88  tcaagaaagccgtggaaaaatatg 111
           ||||||||||||||| ||||||||
Sbjct: 141 tcaagaaagccgtgggaaaatatg 164




>51740_ptc-miR396g:pmrd
          Length = 168

 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 84  aagttcaagaaagccgtggaaaa 106
           |||||||||||||||||||||||
Sbjct: 31  aagttcaagaaagccgtggaaaa 9



 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 10  tttcccacggctttcttgagctt 32
           |||||||||||||||||||||||
Sbjct: 162 tttcccacggctttcttgagctt 140



 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 88  tcaagaaagccgtggaaaaatatga 112
           ||||||||||||||| |||||||||
Sbjct: 144 tcaagaaagccgtgggaaaatatga 168




>51564_pta-miR396:pmrd
          Length = 119

 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                          
Query: 84  aagttcaagaaagccgtggaaaaatatgaca 114
           |||||||||||||| |||||||| |||||||
Sbjct: 37  aagttcaagaaagctgtggaaaagtatgaca 7




>52919_ptc-miRf11097-akr:pmrd
          Length = 115

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 85  agttcaagaaagccgtggaaaa 106
           ||||||||||||||||||||||
Sbjct: 93  agttcaagaaagccgtggaaaa 114




>52893_ptc-miRf11071-akr:pmrd
          Length = 148

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 12 tcccacggctttcttgagcttc 33
          ||||||||||||||||||||||
Sbjct: 7  tcccacggctttcttgagcttc 28



 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 82  ggaagttcaagaaagccgtggaaaa 106
           |||||||||||||||| ||||||||
Sbjct: 120 ggaagttcaagaaagctgtggaaaa 144




>52304_ptc-miRf10482-akr:pmrd
          Length = 102

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 83  gaagttcaagaaagccgtggaa 104
           ||||||||||||||||||||||
Sbjct: 31  gaagttcaagaaagccgtggaa 10



 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 82  ggaagttcaagaaagccgtggaaaaa 107
           |||||||||||||||| |||||||||
Sbjct: 71  ggaagttcaagaaagctgtggaaaaa 96




>51739_ptc-miR396f:pmrd
          Length = 127

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 85  agttcaagaaagccgtggaaaa 106
           ||||||||||||||||||||||
Sbjct: 30  agttcaagaaagccgtggaaaa 9




>51737_ptc-miR396d:pmrd
          Length = 154

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 12  tcccacggctttcttgagcttc 33
           ||||||||||||||||||||||
Sbjct: 146 tcccacggctttcttgagcttc 125



 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 82  ggaagttcaagaaagccgtggaaaa 106
           |||||||||||||||| ||||||||
Sbjct: 33  ggaagttcaagaaagctgtggaaaa 9




>51736_ptc-miR396c:pmrd
          Length = 102

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 82  ggaagttcaagaaagccgtggaaaaa 107
           |||||||||||||||| |||||||||
Sbjct: 33  ggaagttcaagaaagctgtggaaaaa 8



 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 83  gaagttcaagaaagccgtggaa 104
           ||||||||||||||||||||||
Sbjct: 73  gaagttcaagaaagccgtggaa 94




>47009_ath-miR396b:pmrd
          Length = 135

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 84  aagttcaagaaagccgtggaaaaatatgac 113
           |||||||||||||| |||||||| ||||||
Sbjct: 31  aagttcaagaaagctgtggaaaagtatgac 2



 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 10  tttcccacggctttcttgagcttc 33
           |||||||| |||||||||||||||
Sbjct: 127 tttcccacagctttcttgagcttc 104




>55077_zma-miR396f:pmrd
          Length = 166

 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 11  ttcccacggctttcttgagcttctt 35
           |||||||||||||||||| ||||||
Sbjct: 165 ttcccacggctttcttgaccttctt 141




>54584_smo-miR396:pmrd
          Length = 168

 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 86  gttcaagaaagccgtggaaaa 106
           |||||||||||||||||||||
Sbjct: 29  gttcaagaaagccgtggaaaa 9




>54869_vvi-miR396b:pmrd
          Length = 108

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 83  gaagttcaagaaagccgtggaaaa 106
           ||||||||||||||| ||||||||
Sbjct: 35  gaagttcaagaaagctgtggaaaa 12




>53179_ptc-miRf11357-akr:pmrd
          Length = 141

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 83  gaagttcaagaaagccgtggaaaa 106
           ||||||||||||||| ||||||||
Sbjct: 113 gaagttcaagaaagctgtggaaaa 136




>52080_ptc-miRf10258-akr:pmrd
          Length = 141

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 83  gaagttcaagaaagccgtggaaaa 106
           ||||||||||||||| ||||||||
Sbjct: 113 gaagttcaagaaagctgtggaaaa 136




>51738_ptc-miR396e:pmrd
          Length = 145

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 83  gaagttcaagaaagccgtggaaaa 106
           ||||||||||||||| ||||||||
Sbjct: 32  gaagttcaagaaagctgtggaaaa 9




>48748_mtr-miR396a:pmrd
          Length = 93

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 83  gaagttcaagaaagccgtggaaaa 106
           ||||||||||||||| ||||||||
Sbjct: 27  gaagttcaagaaagctgtggaaaa 4




>48580_gma-miR396c:pmrd
          Length = 117

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 83  gaagttcaagaaagccgtggaaaa 106
           ||||||||||||||| ||||||||
Sbjct: 42  gaagttcaagaaagctgtggaaaa 19




>48579_gma-miR396b:pmrd
          Length = 126

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 83  gaagttcaagaaagccgtggaaaa 106
           ||||||||||||||| ||||||||
Sbjct: 42  gaagttcaagaaagctgtggaaaa 19