miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>54927_zma-miR156r:pmrd
Length = 99
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 70 atgtgtgcccactctcttctgtca 93
||||||||||||||||||||||||
Sbjct: 24 atgtgtgcccactctcttctgtca 1
>54913_zma-miR156c:pmrd
Length = 139
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 70 atgtgtgcccactctcttctgtcagc 95
|||||||| |||||||||||||||||
Sbjct: 44 atgtgtgctcactctcttctgtcagc 19
>48803_osa-miR156c:pmrd
Length = 149
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 70 atgtgtgcccactctcttctgtcagc 95
|||||||| |||||||||||||||||
Sbjct: 52 atgtgtgctcactctcttctgtcagc 27
>51354_ppr-miR156:pmrd
Length = 103
Score = 42.1 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 70 atgtgtgcccactctcttctgtcag 94
|||||||| ||||||||||||||||
Sbjct: 25 atgtgtgctcactctcttctgtcag 1
>48807_osa-miR156g:pmrd
Length = 116
Score = 42.1 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 71 tgtgtgcccactctcttctgtcagc 95
||||||| |||||||||||||||||
Sbjct: 26 tgtgtgctcactctcttctgtcagc 2
>48795_oru-miR156:pmrd
Length = 93
Score = 42.1 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 70 atgtgtgcccactctcttctgtcag 94
|||||||| ||||||||||||||||
Sbjct: 25 atgtgtgctcactctcttctgtcag 1
>54924_zma-miR156o:pmrd
Length = 99
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 70 atgtgtgcccactctcttctgtca 93
|||||||| |||||||||||||||
Sbjct: 24 atgtgtgctcactctcttctgtca 1
>54911_zma-miR156a:pmrd
Length = 152
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 71 tgtgtgcccactctcttctgtcag 94
||||||| ||||||||||||||||
Sbjct: 40 tgtgtgctcactctcttctgtcag 17
>54768_vvi-miR156c:pmrd
Length = 104
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 70 atgtgtgcccactctcttctgtca 93
|||||||| |||||||||||||||
Sbjct: 34 atgtgtgctcactctcttctgtca 11
>54767_vvi-miR156b:pmrd
Length = 102
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 71 tgtgtgcccactctcttctgtcag 94
||||||| ||||||||||||||||
Sbjct: 33 tgtgtgctcactctcttctgtcag 10
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 12 agctgacagaaagagatatgggcacgca 39
|||||||||||||||| ||| |||||||
Sbjct: 93 agctgacagaaagagaaatgagcacgca 66
>54401_sbi-miR156i:pmrd
Length = 121
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 71 tgtgtgcccactctcttctgtcag 94
||||||| ||||||||||||||||
Sbjct: 25 tgtgtgctcactctcttctgtcag 2
>54395_sbi-miR156c:pmrd
Length = 95
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 70 atgtgtgcccactctcttctgtca 93
|||||||| |||||||||||||||
Sbjct: 24 atgtgtgctcactctcttctgtca 1
>51926_ptc-miRf10104-akr:pmrd
Length = 96
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 71 tgtgtgcccactctcttctgtcag 94
||||||| ||||||||||||||||
Sbjct: 30 tgtgtgctcactctcttctgtcag 7
>51596_ptc-miR156f:pmrd
Length = 101
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 71 tgtgtgcccactctcttctgtcag 94
||||||| ||||||||||||||||
Sbjct: 33 tgtgtgctcactctcttctgtcag 10
>51593_ptc-miR156c:pmrd
Length = 100
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 71 tgtgtgcccactctcttctgtcag 94
||||||| ||||||||||||||||
Sbjct: 33 tgtgtgctcactctcttctgtcag 10
>51591_ptc-miR156a:pmrd
Length = 101
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 71 tgtgtgcccactctcttctgtcag 94
||||||| ||||||||||||||||
Sbjct: 33 tgtgtgctcactctcttctgtcag 10
>49442_osa-miRf10227-akr:pmrd
Length = 93
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 71 tgtgtgcccactctcttctgtcag 94
||||||| ||||||||||||||||
Sbjct: 67 tgtgtgctcactctcttctgtcag 90
>48802_osa-miR156b:pmrd
Length = 176
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 71 tgtgtgcccactctcttctgtcag 94
||||||| ||||||||||||||||
Sbjct: 65 tgtgtgctcactctcttctgtcag 42
>48248_ath-miRf11148-akr:pmrd
Length = 96
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 70 atgtgtgcccactctcttctgtca 93
|||||||| |||||||||||||||
Sbjct: 73 atgtgtgctcactctcttctgtca 96
>47357_ath-miRf10257-akr:pmrd
Length = 94
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 70 atgtgtgcccactctcttctgtca 93
|||||||| |||||||||||||||
Sbjct: 26 atgtgtgctcactctcttctgtca 3
>47356_ath-miRf10256-akr:pmrd
Length = 94
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 70 atgtgtgcccactctcttctgtca 93
|||||||| |||||||||||||||
Sbjct: 26 atgtgtgctcactctcttctgtca 3
>46915_ath-miR156f:pmrd
Length = 132
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 70 atgtgtgcccactctcttctgtca 93
|||||||| |||||||||||||||
Sbjct: 44 atgtgtgctcactctcttctgtca 21
>46914_ath-miR156e:pmrd
Length = 107
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 70 atgtgtgcccactctcttctgtca 93
|||||||| |||||||||||||||
Sbjct: 30 atgtgtgctcactctcttctgtca 7
>46912_ath-miR156c:pmrd
Length = 104
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 71 tgtgtgcccactctcttctgtcag 94
||||||| ||||||||||||||||
Sbjct: 34 tgtgtgctcactctcttctgtcag 11
>46910_ath-miR156a:pmrd
Length = 123
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 71 tgtgtgcccactctcttctgtcag 94
||||||| ||||||||||||||||
Sbjct: 43 tgtgtgctcactctcttctgtcag 20
