miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>51334_pga-miR160:pmrd
          Length = 80

 Score =  159 bits (80), Expect = 6e-40
 Identities = 80/80 (100%)
 Strand = Plus / Plus

                                                                       
Query: 21  tgcctggctccctgtatgccacatacaaggcccagtcatatgttgattggcttcataggt 80
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   tgcctggctccctgtatgccacatacaaggcccagtcatatgttgattggcttcataggt 60

                               
Query: 81  ggcttacaaggagccaagca 100
           ||||||||||||||||||||
Sbjct: 61  ggcttacaaggagccaagca 80




>54939_zma-miR160b:pmrd
          Length = 121

 Score = 54.0 bits (27), Expect = 2e-08
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                     
Query: 17 tgtgtgcctggctccctgtatgccaca 43
          |||||||||||||||||||||||||||
Sbjct: 17 tgtgtgcctggctccctgtatgccaca 43




>48826_osa-miR160a:pmrd
          Length = 88

 Score = 52.0 bits (26), Expect = 9e-08
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                    
Query: 18 gtgtgcctggctccctgtatgccaca 43
          ||||||||||||||||||||||||||
Sbjct: 1  gtgtgcctggctccctgtatgccaca 26




>54780_vvi-miR160c:pmrd
          Length = 106

 Score = 50.1 bits (25), Expect = 4e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 19 tgtgcctggctccctgtatgccaca 43
          |||||||||||||||||||||||||
Sbjct: 9  tgtgcctggctccctgtatgccaca 33




>54940_zma-miR160c:pmrd
          Length = 100

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 19 tgtgcctggctccctgtatgccac 42
          ||||||||||||||||||||||||
Sbjct: 5  tgtgcctggctccctgtatgccac 28




>54938_zma-miR160a:pmrd
          Length = 104

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 20 gtgcctggctccctgtatgccaca 43
          ||||||||||||||||||||||||
Sbjct: 9  gtgcctggctccctgtatgccaca 32




>48828_osa-miR160c:pmrd
          Length = 99

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 19 tgtgcctggctccctgtatgccac 42
          ||||||||||||||||||||||||
Sbjct: 5  tgtgcctggctccctgtatgccac 28




>48791_oba-miR160:pmrd
          Length = 90

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 19 tgtgcctggctccctgtatgccac 42
          ||||||||||||||||||||||||
Sbjct: 2  tgtgcctggctccctgtatgccac 25




>48703_mtr-miR160d:pmrd
          Length = 91

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 18 gtgtgcctggctccctgtatgcca 41
          ||||||||||||||||||||||||
Sbjct: 3  gtgtgcctggctccctgtatgcca 26




>47338_ath-miRf10238-akr:pmrd
          Length = 89

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 20 gtgcctggctccctgtatgccaca 43
          ||||||||||||||||||||||||
Sbjct: 4  gtgcctggctccctgtatgccaca 27




>46935_ath-miR160b:pmrd
          Length = 89

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 20 gtgcctggctccctgtatgccaca 43
          ||||||||||||||||||||||||
Sbjct: 4  gtgcctggctccctgtatgccaca 27




>54947_zma-miR160m:pmrd
          Length = 81

 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 21 tgcctggctccctgtatgccaca 43
          |||||||||||||||||||||||
Sbjct: 1  tgcctggctccctgtatgccaca 23




>54945_zma-miR160h:pmrd
          Length = 86

 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 21 tgcctggctccctgtatgccaca 43
          |||||||||||||||||||||||
Sbjct: 1  tgcctggctccctgtatgccaca 23




>54944_zma-miR160g:pmrd
          Length = 86

 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 21 tgcctggctccctgtatgccaca 43
          |||||||||||||||||||||||
Sbjct: 1  tgcctggctccctgtatgccaca 23




>54405_sbi-miR160b:pmrd
          Length = 82

 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 21 tgcctggctccctgtatgccaca 43
          |||||||||||||||||||||||
Sbjct: 1  tgcctggctccctgtatgccaca 23




>54404_sbi-miR160a:pmrd
          Length = 84

 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 21 tgcctggctccctgtatgccaca 43
          |||||||||||||||||||||||
Sbjct: 1  tgcctggctccctgtatgccaca 23




>53874_ptc-miRf12052-akr:pmrd
          Length = 110

 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 21 tgcctggctccctgtatgccaca 43
          |||||||||||||||||||||||
Sbjct: 12 tgcctggctccctgtatgccaca 34




>51611_ptc-miR160d:pmrd
          Length = 103

 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 21 tgcctggctccctgtatgccaca 43
          |||||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgccaca 33




>51610_ptc-miR160c:pmrd
          Length = 98

 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 19 tgtgcctggctccctgtatgcca 41
          |||||||||||||||||||||||
Sbjct: 9  tgtgcctggctccctgtatgcca 31




>51609_ptc-miR160b:pmrd
          Length = 98

 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 19 tgtgcctggctccctgtatgcca 41
          |||||||||||||||||||||||
Sbjct: 9  tgtgcctggctccctgtatgcca 31




>51608_ptc-miR160a:pmrd
          Length = 102

 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 21 tgcctggctccctgtatgccaca 43
          |||||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgccaca 33




>48827_osa-miR160b:pmrd
          Length = 139

 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 20 gtgcctggctccctgtatgccac 42
          |||||||||||||||||||||||
Sbjct: 29 gtgcctggctccctgtatgccac 51




>48704_mtr-miR160e:pmrd
          Length = 91

 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 19 tgtgcctggctccctgtatgcca 41
          |||||||||||||||||||||||
Sbjct: 4  tgtgcctggctccctgtatgcca 26




>48702_mtr-miR160b:pmrd
          Length = 91

 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 19 tgtgcctggctccctgtatgcca 41
          |||||||||||||||||||||||
Sbjct: 4  tgtgcctggctccctgtatgcca 26




>48542_gma-miR160a:pmrd
          Length = 119

 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 19 tgtgcctggctccctgtatgcca 41
          |||||||||||||||||||||||
Sbjct: 19 tgtgcctggctccctgtatgcca 41




>54946_zma-miR160i:pmrd
          Length = 81

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 21 tgcctggctccctgtatgccac 42
          ||||||||||||||||||||||
Sbjct: 2  tgcctggctccctgtatgccac 23




>54942_zma-miR160e:pmrd
          Length = 94

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 21 tgcctggctccctgtatgccac 42
          ||||||||||||||||||||||
Sbjct: 9  tgcctggctccctgtatgccac 30




>54941_zma-miR160d:pmrd
          Length = 142

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 21 tgcctggctccctgtatgccac 42
          ||||||||||||||||||||||
Sbjct: 21 tgcctggctccctgtatgccac 42




>54759_ttu-miR160a:pmrd
          Length = 87

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 21 tgcctggctccctgtatgccac 42
          ||||||||||||||||||||||
Sbjct: 1  tgcctggctccctgtatgccac 22




>54675_tae-miR160:pmrd
          Length = 148

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 21 tgcctggctccctgtatgccac 42
          ||||||||||||||||||||||
Sbjct: 22 tgcctggctccctgtatgccac 43




>54575_smo-miR160b:pmrd
          Length = 108

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 21 tgcctggctccctgtatgccac 42
          ||||||||||||||||||||||
Sbjct: 13 tgcctggctccctgtatgccac 34




>54408_sbi-miR160e:pmrd
          Length = 95

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 21 tgcctggctccctgtatgccac 42
          ||||||||||||||||||||||
Sbjct: 1  tgcctggctccctgtatgccac 22




>54407_sbi-miR160d:pmrd
          Length = 100

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 21 tgcctggctccctgtatgccac 42
          ||||||||||||||||||||||
Sbjct: 1  tgcctggctccctgtatgccac 22




>54406_sbi-miR160c:pmrd
          Length = 83

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 21 tgcctggctccctgtatgccac 42
          ||||||||||||||||||||||
Sbjct: 1  tgcctggctccctgtatgccac 22




>51364_ppt-miR160f:pmrd
          Length = 138

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 21 tgcctggctccctgtatgccac 42
          ||||||||||||||||||||||
Sbjct: 30 tgcctggctccctgtatgccac 51




>51363_ppt-miR160e:pmrd
          Length = 138

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 21 tgcctggctccctgtatgccac 42
          ||||||||||||||||||||||
Sbjct: 30 tgcctggctccctgtatgccac 51




>51359_ppt-miR160a:pmrd
          Length = 99

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 21 tgcctggctccctgtatgccac 42
          ||||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgccac 32




>48833_osa-miR160n:pmrd
          Length = 131

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 21 tgcctggctccctgtatgccac 42
          ||||||||||||||||||||||
Sbjct: 1  tgcctggctccctgtatgccac 22




>48832_osa-miR160m:pmrd
          Length = 82

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 21 tgcctggctccctgtatgccac 42
          ||||||||||||||||||||||
Sbjct: 1  tgcctggctccctgtatgccac 22




>48829_osa-miR160d:pmrd
          Length = 142

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 21 tgcctggctccctgtatgccac 42
          ||||||||||||||||||||||
Sbjct: 8  tgcctggctccctgtatgccac 29




>46936_ath-miR160c:pmrd
          Length = 89

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 21 tgcctggctccctgtatgccac 42
          ||||||||||||||||||||||
Sbjct: 5  tgcctggctccctgtatgccac 26




>54783_vvi-miR160f:pmrd
          Length = 102

 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 21 tgcctggctccctgtatgcca 41
          |||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgcca 31




>54781_vvi-miR160d:pmrd
          Length = 102

 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 21 tgcctggctccctgtatgcca 41
          |||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgcca 31




>54574_smo-miR160a:pmrd
          Length = 106

 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 21 tgcctggctccctgtatgcca 41
          |||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgcca 31




>54541_sly-miR160a:pmrd
          Length = 129

 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 21 tgcctggctccctgtatgcca 41
          |||||||||||||||||||||
Sbjct: 20 tgcctggctccctgtatgcca 40




>51615_ptc-miR160h:pmrd
          Length = 98

 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 17 tgtgtgcctggctccctgtatgcca 41
          |||||||||||||||||| ||||||
Sbjct: 7  tgtgtgcctggctccctgcatgcca 31




>51367_ppt-miR160i:pmrd
          Length = 139

 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 22 gcctggctccctgtatgccac 42
          |||||||||||||||||||||
Sbjct: 31 gcctggctccctgtatgccac 51




>48658_hvv-miR160a:pmrd
          Length = 344

 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 21  tgcctggctccctgtatgcca 41
           |||||||||||||||||||||
Sbjct: 324 tgcctggctccctgtatgcca 344




>48397_bra-miR160a:pmrd
          Length = 127

 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 21 tgcctggctccctgtatgcca 41
          |||||||||||||||||||||
Sbjct: 26 tgcctggctccctgtatgcca 46




>48396_bra-miR160a:pmrd
          Length = 127

 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 21 tgcctggctccctgtatgcca 41
          |||||||||||||||||||||
Sbjct: 26 tgcctggctccctgtatgcca 46




>47213_ath-miRf10113-akr:pmrd
          Length = 85

 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 21 tgcctggctccctgtatgcca 41
          |||||||||||||||||||||
Sbjct: 4  tgcctggctccctgtatgcca 24




>46934_ath-miR160a:pmrd
          Length = 85

 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 21 tgcctggctccctgtatgcca 41
          |||||||||||||||||||||
Sbjct: 4  tgcctggctccctgtatgcca 24




>46865_aqc-miR160b:pmrd
          Length = 82

 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 21 tgcctggctccctgtatgcca 41
          |||||||||||||||||||||
Sbjct: 1  tgcctggctccctgtatgcca 21




>54943_zma-miR160f:pmrd
          Length = 116

 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 21 tgcctggctccctgtatgcc 40
          ||||||||||||||||||||
Sbjct: 21 tgcctggctccctgtatgcc 40