miRNEST 2.0, an integrative microRNA resource :: BLAST
>51616_ptc-miR162a:pmrd
Length = 107
Score = 198 bits (100), Expect = 7e-52
Identities = 107/108 (99%), Gaps = 1/108 (0%)
Strand = Plus / Plus
Query: 9 tgggaagacactnggaggcagcggttcatcgatctcttcctggccaattttttgtttagc 68
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgggaagacact-ggaggcagcggttcatcgatctcttcctggccaattttttgtttagc 59
Query: 69 acgaaaaacatgaaccgatcgataaacctctgcatccagcgcttcctt 116
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 60 acgaaaaacatgaaccgatcgataaacctctgcatccagcgcttcctt 107
>52400_ptc-miRf10578-akr:pmrd
Length = 103
Score = 190 bits (96), Expect = 2e-49
Identities = 103/104 (99%), Gaps = 1/104 (0%)
Strand = Plus / Minus
Query: 11 ggaagacactnggaggcagcggttcatcgatctcttcctggccaattttttgtttagcac 70
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 103 ggaagacact-ggaggcagcggttcatcgatctcttcctggccaattttttgtttagcac 45
Query: 71 gaaaaacatgaaccgatcgataaacctctgcatccagcgcttcc 114
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 44 gaaaaacatgaaccgatcgataaacctctgcatccagcgcttcc 1
>52399_ptc-miRf10577-akr:pmrd
Length = 103
Score = 190 bits (96), Expect = 2e-49
Identities = 103/104 (99%), Gaps = 1/104 (0%)
Strand = Plus / Minus
Query: 11 ggaagacactnggaggcagcggttcatcgatctcttcctggccaattttttgtttagcac 70
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 103 ggaagacact-ggaggcagcggttcatcgatctcttcctggccaattttttgtttagcac 45
Query: 71 gaaaaacatgaaccgatcgataaacctctgcatccagcgcttcc 114
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 44 gaaaaacatgaaccgatcgataaacctctgcatccagcgcttcc 1
>52497_ptc-miRf10675-akr:pmrd
Length = 105
Score = 109 bits (55), Expect = 5e-25
Identities = 92/103 (89%), Gaps = 1/103 (0%)
Strand = Plus / Minus
Query: 12 gaagacactnggaggcagcggttcatcgatctcttcctggccaattttttgtttagcacg 71
||||||||| |||||||||||||||||||||| |||||| | |||||||||| ||||
Sbjct: 103 gaagacact-ggaggcagcggttcatcgatcttttcctgaagatttttttgttttacacg 45
Query: 72 aaaaacatgaaccgatcgataaacctctgcatccagcgcttcc 114
|| |||| |||||||||||||||||||||||||||| ||||||
Sbjct: 44 aacaacacgaaccgatcgataaacctctgcatccagtgcttcc 2
>52244_ptc-miRf10422-akr:pmrd
Length = 105
Score = 109 bits (55), Expect = 5e-25
Identities = 92/103 (89%), Gaps = 1/103 (0%)
Strand = Plus / Minus
Query: 12 gaagacactnggaggcagcggttcatcgatctcttcctggccaattttttgtttagcacg 71
||||||||| |||||||||||||||||||||| |||||| | |||||||||| ||||
Sbjct: 103 gaagacact-ggaggcagcggttcatcgatcttttcctgaagatttttttgttttacacg 45
Query: 72 aaaaacatgaaccgatcgataaacctctgcatccagcgcttcc 114
|| |||| |||||||||||||||||||||||||||| ||||||
Sbjct: 44 aacaacacgaaccgatcgataaacctctgcatccagtgcttcc 2
>51618_ptc-miR162c:pmrd
Length = 107
Score = 109 bits (55), Expect = 5e-25
Identities = 92/103 (89%), Gaps = 1/103 (0%)
Strand = Plus / Plus
Query: 12 gaagacactnggaggcagcggttcatcgatctcttcctggccaattttttgtttagcacg 71
||||||||| |||||||||||||||||||||| |||||| | |||||||||| ||||
Sbjct: 4 gaagacact-ggaggcagcggttcatcgatcttttcctgaagatttttttgttttacacg 62
Query: 72 aaaaacatgaaccgatcgataaacctctgcatccagcgcttcc 114
|| |||| |||||||||||||||||||||||||||| ||||||
Sbjct: 63 aacaacacgaaccgatcgataaacctctgcatccagtgcttcc 105
>51617_ptc-miR162b:pmrd
Length = 107
Score = 109 bits (55), Expect = 5e-25
Identities = 92/103 (89%), Gaps = 1/103 (0%)
Strand = Plus / Plus
Query: 12 gaagacactnggaggcagcggttcatcgatctcttcctggccaattttttgtttagcacg 71
||||||||| |||||||||||||||||||||| |||||| | |||||||||| ||||
Sbjct: 4 gaagacact-ggaggcagcggttcatcgatcttttcctgaagatttttttgttttacacg 62
Query: 72 aaaaacatgaaccgatcgataaacctctgcatccagcgcttcc 114
|| |||| |||||||||||||||||||||||||||| ||||||
Sbjct: 63 aacaacacgaaccgatcgataaacctctgcatccagtgcttcc 105
>52498_ptc-miRf10676-akr:pmrd
Length = 101
Score = 107 bits (54), Expect = 2e-24
Identities = 91/102 (89%), Gaps = 1/102 (0%)
Strand = Plus / Minus
Query: 12 gaagacactnggaggcagcggttcatcgatctcttcctggccaattttttgtttagcacg 71
||||||||| |||||||||||||||||||||| |||||| | |||||||||| ||||
Sbjct: 101 gaagacact-ggaggcagcggttcatcgatcttttcctgaagatttttttgttttacacg 43
Query: 72 aaaaacatgaaccgatcgataaacctctgcatccagcgcttc 113
|| |||| |||||||||||||||||||||||||||| |||||
Sbjct: 42 aacaacacgaaccgatcgataaacctctgcatccagtgcttc 1
>52243_ptc-miRf10421-akr:pmrd
Length = 101
Score = 107 bits (54), Expect = 2e-24
Identities = 91/102 (89%), Gaps = 1/102 (0%)
Strand = Plus / Minus
Query: 12 gaagacactnggaggcagcggttcatcgatctcttcctggccaattttttgtttagcacg 71
||||||||| |||||||||||||||||||||| |||||| | |||||||||| ||||
Sbjct: 101 gaagacact-ggaggcagcggttcatcgatcttttcctgaagatttttttgttttacacg 43
Query: 72 aaaaacatgaaccgatcgataaacctctgcatccagcgcttc 113
|| |||| |||||||||||||||||||||||||||| |||||
Sbjct: 42 aacaacacgaaccgatcgataaacctctgcatccagtgcttc 1
>48545_gma-miR162a:pmrd
Length = 102
Score = 65.9 bits (33), Expect = 7e-12
Identities = 73/86 (84%), Gaps = 4/86 (4%)
Strand = Plus / Plus
Query: 26 gcagcggttcatcgatctcttcctggccaattttttgtttagcacgaaaaacatgaaccg 85
||||||||||||||||||||||||| | | ||||||| || | || |||||| ||
Sbjct: 16 gcagcggttcatcgatctcttcctg----aatcgttgtttaacatcagaaccatgaatcg 71
Query: 86 atcgataaacctctgcatccagcgct 111
||||||||||||||||||||||||||
Sbjct: 72 atcgataaacctctgcatccagcgct 97
>48493_ghr-miR162a:pmrd
Length = 148
Score = 65.9 bits (33), Expect = 7e-12
Identities = 87/102 (85%), Gaps = 6/102 (5%)
Strand = Plus / Plus
Query: 13 aagacactnggaggcagcggttcatcgatctcttcctggccaattttttgtt----tagc 68
|||||||| ||||||||||||||||||||||||||||| | ||| |||| || |
Sbjct: 18 aagacact-ggaggcagcggttcatcgatctcttcctgagaattttgttgtgagaataac 76
Query: 69 acgaaaaacatgaaccgatcgataaacctctgcatccagcgc 110
|| ||| ||||||| |||||||||||||||||||||||||||
Sbjct: 77 ac-aaatacatgaatcgatcgataaacctctgcatccagcgc 117
>48423_cpa-miR162a:pmrd
Length = 109
Score = 61.9 bits (31), Expect = 1e-10
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 75 aacatgaaccgatcgataaacctctgcatccagcg 109
|||||||| ||||||||||||||||||||||||||
Sbjct: 68 aacatgaatcgatcgataaacctctgcatccagcg 102
Score = 60.0 bits (30), Expect = 4e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 22 ggaggcagcggttcatcgatctcttcctgg 51
||||||||||||||||||||||||||||||
Sbjct: 15 ggaggcagcggttcatcgatctcttcctgg 44
>54387_rco-miR162:pmrd
Length = 96
Score = 60.0 bits (30), Expect = 4e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 22 ggaggcagcggttcatcgatctcttcctgg 51
||||||||||||||||||||||||||||||
Sbjct: 5 ggaggcagcggttcatcgatctcttcctgg 34
Score = 56.0 bits (28), Expect = 6e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 77 catgaaccgatcgataaacctctgcatccagc 108
|||||| |||||||||||||||||||||||||
Sbjct: 65 catgaatcgatcgataaacctctgcatccagc 96
>46937_ath-miR162a:pmrd
Length = 140
Score = 58.0 bits (29), Expect = 2e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 22 ggaggcagcggttcatcgatctcttcctg 50
|||||||||||||||||||||||||||||
Sbjct: 27 ggaggcagcggttcatcgatctcttcctg 55
Score = 52.0 bits (26), Expect = 1e-07
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 72 aaaaacatgaaccgatcgataaacctctgcatccagcg 109
|||| |||||| |||||||||||||||||||||||||
Sbjct: 74 aaaagcatgaatagatcgataaacctctgcatccagcg 111
>47354_ath-miRf10254-akr:pmrd
Length = 115
Score = 56.0 bits (28), Expect = 6e-09
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 84 cgatcgataaacctctgcatccagcgct 111
||||||||||||||||||||||||||||
Sbjct: 38 cgatcgataaacctctgcatccagcgct 11
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 22 ggaggcagcggttcatcgatc 42
|||||||||||||||||||||
Sbjct: 100 ggaggcagcggttcatcgatc 80
>46938_ath-miR162b:pmrd
Length = 111
Score = 56.0 bits (28), Expect = 6e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 84 cgatcgataaacctctgcatccagcgct 111
||||||||||||||||||||||||||||
Sbjct: 76 cgatcgataaacctctgcatccagcgct 103
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 22 ggaggcagcggttcatcgatc 42
|||||||||||||||||||||
Sbjct: 14 ggaggcagcggttcatcgatc 34
>48682_llu-miR162:pmrd
Length = 80
Score = 54.0 bits (27), Expect = 3e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 77 catgaaccgatcgataaacctctgcatccag 107
|||||| ||||||||||||||||||||||||
Sbjct: 50 catgaatcgatcgataaacctctgcatccag 80
>48707_mtr-miR162d:pmrd
Length = 87
Score = 52.0 bits (26), Expect = 1e-07
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 74 aaacatgaaccgatcgataaacctctgcatccag 107
||||||||| || |||||||||||||||||||||
Sbjct: 54 aaacatgaatcggtcgataaacctctgcatccag 87
>54784_vvi-miR162:pmrd
Length = 103
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 26 gcagcggttcatcgatctcttcctg 50
|||||||||||||||||||||||||
Sbjct: 15 gcagcggttcatcgatctcttcctg 39
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 87 tcgataaacctctgcatccagcg 109
|||||||||||||||||||||||
Sbjct: 73 tcgataaacctctgcatccagcg 95
>48706_mtr-miR162c:pmrd
Length = 86
Score = 50.1 bits (25), Expect = 4e-07
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 74 aaacatgaaccgatcgataaacctctgcatcca 106
||||||||| || ||||||||||||||||||||
Sbjct: 33 aaacatgaatcggtcgataaacctctgcatcca 1
>48705_mtr-miR162b:pmrd
Length = 85
Score = 50.1 bits (25), Expect = 4e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 74 aaacatgaaccgatcgataaacctctgcatcca 106
||||||||| || ||||||||||||||||||||
Sbjct: 53 aaacatgaatcggtcgataaacctctgcatcca 85
>48685_lsa-miR162:pmrd
Length = 89
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 87 tcgataaacctctgcatccagcgct 111
|||||||||||||||||||||||||
Sbjct: 1 tcgataaacctctgcatccagcgct 25
>48546_gma-miR162m:pmrd
Length = 367
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 87 tcgataaacctctgcatccagcgct 111
|||||||||||||||||||||||||
Sbjct: 1 tcgataaacctctgcatccagcgct 25
>48834_osa-miR162a:pmrd
Length = 171
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 84 cgatcgataaacctctgcatccag 107
||||||||||||||||||||||||
Sbjct: 140 cgatcgataaacctctgcatccag 163
>54948_zma-miR162b:pmrd
Length = 130
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 87 tcgataaacctctgcatccag 107
|||||||||||||||||||||
Sbjct: 110 tcgataaacctctgcatccag 130
>54542_sly-miR162:pmrd
Length = 99
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 87 tcgataaacctctgcatccag 107
|||||||||||||||||||||
Sbjct: 79 tcgataaacctctgcatccag 99
>48836_osa-miR162m:pmrd
Length = 114
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 84 cgatcgataaacctctgcatccag 107
|||||||||| |||||||||||||
Sbjct: 91 cgatcgataagcctctgcatccag 114
>48835_osa-miR162b:pmrd
Length = 134
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 84 cgatcgataaacctctgcatccag 107
|||||||||| |||||||||||||
Sbjct: 101 cgatcgataagcctctgcatccag 124
