miRNEST 2.0, an integrative microRNA resource :: BLAST
>54306_ptc-miRf12484-akr:pmrd
Length = 100
Score = 52.0 bits (26), Expect = 8e-08
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 73 tttttgaaccgaaccgaaccgaaaac 98
||||||||||||||||||||||||||
Sbjct: 34 tttttgaaccgaaccgaaccgaaaac 9
>54036_ptc-miRf12214-akr:pmrd
Length = 99
Score = 52.0 bits (26), Expect = 8e-08
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 73 tttttgaaccgaaccgaaccgaaaac 98
||||||||||||||||||||||||||
Sbjct: 29 tttttgaaccgaaccgaaccgaaaac 4
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 5 gagcatttccggttcggtccggtt 28
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Sbjct: 97 gagcatttccggttcggtccggtt 74
>53555_ptc-miRf11733-akr:pmrd
Length = 99
Score = 52.0 bits (26), Expect = 8e-08
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 73 tttttgaaccgaaccgaaccgaaaac 98
||||||||||||||||||||||||||
Sbjct: 29 tttttgaaccgaaccgaaccgaaaac 4
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 5 gagcatttccggttcggtccggtt 28
||||||||||||||||||||||||
Sbjct: 97 gagcatttccggttcggtccggtt 74
>53388_ptc-miRf11566-akr:pmrd
Length = 99
Score = 52.0 bits (26), Expect = 8e-08
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 73 tttttgaaccgaaccgaaccgaaaac 98
||||||||||||||||||||||||||
Sbjct: 34 tttttgaaccgaaccgaaccgaaaac 9
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 4 tgagcatttccggttcggtccggtt 28
|||||||||||||||||||||||||
Sbjct: 98 tgagcatttccggttcggtccggtt 74
>51832_ptc-miRf10010-akr:pmrd
Length = 97
Score = 52.0 bits (26), Expect = 8e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 73 tttttgaaccgaaccgaaccgaaaac 98
||||||||||||||||||||||||||
Sbjct: 65 tttttgaaccgaaccgaaccgaaaac 90
Score = 40.1 bits (20), Expect = 3e-04
Identities = 35/40 (87%)
Strand = Plus / Plus
Query: 4 tgagcatttccggttcggtccggttctgggtcaaaataaa 43
||||||||| | ||||||||||||| ||| |||||||||
Sbjct: 1 tgagcattttcagttcggtccggttttggaccaaaataaa 40
>52512_ptc-miRf10690-akr:pmrd
Length = 120
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 75 tttgaaccgaaccgaaccgaaa 96
||||||||||||||||||||||
Sbjct: 18 tttgaaccgaaccgaaccgaaa 39
>53966_ptc-miRf12144-akr:pmrd
Length = 77
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 78 gaaccgaaccgaaccgaaaac 98
|||||||||||||||||||||
Sbjct: 67 gaaccgaaccgaaccgaaaac 47
>51912_ptc-miRf10090-akr:pmrd
Length = 115
Score = 42.1 bits (21), Expect = 8e-05
Identities = 46/53 (86%), Gaps = 1/53 (1%)
Strand = Plus / Minus
Query: 8 catttccggttcggtccggttctgggtcaaaataaataacaaaatcaaaatta 60
||||| ||||||||||||||| |||| |||||||| ||| ||| ||||||||
Sbjct: 111 cattttcggttcggtccggtt-tgggccaaaataagtaatcaaaccaaaatta 60
>53731_ptc-miRf11909-akr:pmrd
Length = 74
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 77 tgaaccgaaccgaaccgaaa 96
||||||||||||||||||||
Sbjct: 9 tgaaccgaaccgaaccgaaa 28
>53395_ptc-miRf11573-akr:pmrd
Length = 74
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 77 tgaaccgaaccgaaccgaaa 96
||||||||||||||||||||
Sbjct: 9 tgaaccgaaccgaaccgaaa 28
