miRNEST 2.0, an integrative microRNA resource :: BLAST
>51807_ptc-miR530b:pmrd
Length = 172
Score = 268 bits (135), Expect = 2e-72
Identities = 171/186 (91%), Gaps = 14/186 (7%)
Strand = Plus / Plus
Query: 12 gccaatatgttgcctttatctgcatttgcacctgcatcttttgcgtttgttttgtttttg 71
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gccaatatgttgcctttatctgcatttgcacctgcatcttttgcgtttgttttgtttttg 60
Query: 72 actccacaaacaaaatcaagttctgtcgatacagtatgtgggacaattagatatagagtg 131
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 actccacaaacaaaatcaagttctgtcgatacagtatgtgggacaa-------------- 106
Query: 132 ttagatatggaaactaataagcttagttgaggtgcaggtgcaggtgcaggtgaatgccat 191
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 107 ttagatatggaaactaataagcttagttgaggtgcaggtgcaagtgcaggtgaatgccat 166
Query: 192 tttggt 197
||||||
Sbjct: 167 tttggt 172
>53341_ptc-miRf11519-akr:pmrd
Length = 152
Score = 228 bits (115), Expect = 1e-60
Identities = 151/166 (90%), Gaps = 14/166 (8%)
Strand = Plus / Plus
Query: 23 gcctttatctgcatttgcacctgcatcttttgcgtttgttttgtttttgactccacaaac 82
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gcctttatctgcatttgcacctgcatcttttgcgtttgttttgtttttgactccacaaac 60
Query: 83 aaaatcaagttctgtcgatacagtatgtgggacaattagatatagagtgttagatatgga 142
||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 61 aaaatcaagttctgtcgatacagtatgtgggacaa--------------ttagatatgga 106
Query: 143 aactaataagcttagttgaggtgcaggtgcaggtgcaggtgaatgc 188
||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 107 aactaataagcttagttgaggtgcaggtgcaagtgcaggtgaatgc 152
>51806_ptc-miR530a:pmrd
Length = 144
Score = 71.9 bits (36), Expect = 2e-13
Identities = 39/40 (97%)
Strand = Plus / Plus
Query: 158 ttgaggtgcaggtgcaggtgcaggtgaatgccattttggt 197
|||||||||||||||||||||||||||||||||| |||||
Sbjct: 105 ttgaggtgcaggtgcaggtgcaggtgaatgccatgttggt 144
Score = 63.9 bits (32), Expect = 5e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 12 gccaatatgttgcctttatctgcatttgcacctgca 47
||||| ||||||||||||||||||||||||||||||
Sbjct: 1 gccaacatgttgcctttatctgcatttgcacctgca 36
>52847_ptc-miRf11025-akr:pmrd
Length = 138
Score = 67.9 bits (34), Expect = 3e-12
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 158 ttgaggtgcaggtgcaggtgcaggtgaatgccat 191
||||||||||||||||||||||||||||||||||
Sbjct: 102 ttgaggtgcaggtgcaggtgcaggtgaatgccat 135
Score = 60.0 bits (30), Expect = 7e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 18 atgttgcctttatctgcatttgcacctgca 47
||||||||||||||||||||||||||||||
Sbjct: 4 atgttgcctttatctgcatttgcacctgca 33
>52848_ptc-miRf11026-akr:pmrd
Length = 124
Score = 61.9 bits (31), Expect = 2e-10
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 158 ttgaggtgcaggtgcaggtgcaggtgaatgc 188
|||||||||||||||||||||||||||||||
Sbjct: 94 ttgaggtgcaggtgcaggtgcaggtgaatgc 124
Score = 50.1 bits (25), Expect = 7e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 23 gcctttatctgcatttgcacctgca 47
|||||||||||||||||||||||||
Sbjct: 1 gcctttatctgcatttgcacctgca 25
>51904_ptc-miRf10082-akr:pmrd
Length = 118
Score = 56.0 bits (28), Expect = 1e-08
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 158 ttgaggtgcaggtgcaggtgcaggtgaa 185
||||||||||||||||||||||||||||
Sbjct: 91 ttgaggtgcaggtgcaggtgcaggtgaa 118
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 26 tttatctgcatttgcacctgca 47
||||||||||||||||||||||
Sbjct: 1 tttatctgcatttgcacctgca 22
>46904_aqc-miR530:pmrd
Length = 142
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 30 tctgcatttgcacctgcatct 50
|||||||||||||||||||||
Sbjct: 10 tctgcatttgcacctgcatct 30
