miRNEST 2.0, an integrative microRNA resource :: BLAST
>54375_pts-miR168b:pmrd
Length = 140
Score = 139 bits (70), Expect = 8e-34
Identities = 70/70 (100%)
Strand = Plus / Plus
Query: 16 tcgcttggtgcaggtcgggaactgattcggcgatttgattgccagctggctggacatgac 75
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcgggaactgattcggcgatttgattgccagctggctggacatgac 60
Query: 76 tggttgttat 85
||||||||||
Sbjct: 61 tggttgttat 70
Score = 63.9 bits (32), Expect = 4e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 124 tagcgaattggatcccgccttgcatcaactga 155
||||||||||||||||||||||||||||||||
Sbjct: 109 tagcgaattggatcccgccttgcatcaactga 140
>51650_ptc-miR168a:pmrd
Length = 160
Score = 139 bits (70), Expect = 8e-34
Identities = 76/78 (97%)
Strand = Plus / Plus
Query: 6 ggtctctgattcgcttggtgcaggtcgggaactgattcggcgatttgattgccagctggc 65
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 1 ggtctctgattcgcttggtgcaggtcgggaactgattcggcgatttgattgccagatggc 60
Query: 66 tggacatgactggttgtt 83
| ||||||||||||||||
Sbjct: 61 tcgacatgactggttgtt 78
Score = 79.8 bits (40), Expect = 6e-16
Identities = 40/40 (100%)
Strand = Plus / Plus
Query: 124 tagcgaattggatcccgccttgcatcaactgaatcggagg 163
||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tagcgaattggatcccgccttgcatcaactgaatcggagg 160
>51651_ptc-miR168b:pmrd
Length = 136
Score = 105 bits (53), Expect = 1e-23
Identities = 59/61 (96%)
Strand = Plus / Plus
Query: 6 ggtctctgattcgcttggtgcaggtcgggaactgattcggcgatttgattgccagctggc 65
||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 1 ggtctctaattcgcttggtgcaggtcgggaactgattcggcgatttgattgccagatggc 60
Query: 66 t 66
|
Sbjct: 61 t 61
Score = 69.9 bits (35), Expect = 6e-13
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 128 gaattggatcccgccttgcatcaactgaatcggag 162
|||||||||||||||||||||||||||||||||||
Sbjct: 101 gaattggatcccgccttgcatcaactgaatcggag 135
>48560_gma-miR168:pmrd
Length = 125
Score = 85.7 bits (43), Expect = 1e-17
Identities = 43/43 (100%)
Strand = Plus / Plus
Query: 127 cgaattggatcccgccttgcatcaactgaatcggaggccgcgg 169
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 78 cgaattggatcccgccttgcatcaactgaatcggaggccgcgg 120
Score = 60.0 bits (30), Expect = 6e-10
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 4 gcggtctctgattcgcttggtgcaggtcgggaac 37
||||||||| ||||||||||||||||||||||||
Sbjct: 7 gcggtctctaattcgcttggtgcaggtcgggaac 40
>54374_pts-miR168a:pmrd
Length = 118
Score = 77.8 bits (39), Expect = 2e-15
Identities = 48/51 (94%)
Strand = Plus / Plus
Query: 16 tcgcttggtgcaggtcgggaactgattcggcgatttgattgccagctggct 66
|||||||||||||||||||||||||||| ||||||| |||||||| |||||
Sbjct: 1 tcgcttggtgcaggtcgggaactgattctgcgatttcattgccagatggct 51
Score = 56.0 bits (28), Expect = 9e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 128 gaattggatcccgccttgcatcaactga 155
||||||||||||||||||||||||||||
Sbjct: 91 gaattggatcccgccttgcatcaactga 118
>54366_ptr-miR168:pmrd
Length = 118
Score = 77.8 bits (39), Expect = 2e-15
Identities = 48/51 (94%)
Strand = Plus / Plus
Query: 16 tcgcttggtgcaggtcgggaactgattcggcgatttgattgccagctggct 66
|||||||||||||||||||||||||||| ||||||| |||||||| |||||
Sbjct: 1 tcgcttggtgcaggtcgggaactgattctgcgatttcattgccagatggct 51
Score = 56.0 bits (28), Expect = 9e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 128 gaattggatcccgccttgcatcaactga 155
||||||||||||||||||||||||||||
Sbjct: 91 gaattggatcccgccttgcatcaactga 118
>54388_rco-miR168:pmrd
Length = 156
Score = 75.8 bits (38), Expect = 9e-15
Identities = 41/42 (97%)
Strand = Plus / Plus
Query: 1 ccggcggtctctgattcgcttggtgcaggtcgggaactgatt 42
|||||||||||| |||||||||||||||||||||||||||||
Sbjct: 4 ccggcggtctctaattcgcttggtgcaggtcgggaactgatt 45
Score = 63.9 bits (32), Expect = 4e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 128 gaattggatcccgccttgcatcaactgaatcg 159
||||||||||||||||||||||||||||||||
Sbjct: 110 gaattggatcccgccttgcatcaactgaatcg 141
>46958_ath-miR168b:pmrd
Length = 124
Score = 75.8 bits (38), Expect = 9e-15
Identities = 41/42 (97%)
Strand = Plus / Plus
Query: 1 ccggcggtctctgattcgcttggtgcaggtcgggaactgatt 42
||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 4 ccggcggtctcggattcgcttggtgcaggtcgggaactgatt 45
>48349_bna-miR168:pmrd
Length = 133
Score = 65.9 bits (33), Expect = 9e-12
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 2 cggcggtctctgattcgcttggtgcaggtcgggaactgatt 42
|||||| |||||| |||||||||||||||||||||||||||
Sbjct: 4 cggcggcctctgactcgcttggtgcaggtcgggaactgatt 44
>47339_ath-miRf10239-akr:pmrd
Length = 129
Score = 63.9 bits (32), Expect = 4e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 130 attggatcccgccttgcatcaactgaatcgga 161
||||||||||||||||||||||||||||||||
Sbjct: 91 attggatcccgccttgcatcaactgaatcgga 122
Score = 52.0 bits (26), Expect = 1e-07
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 13 gattcgcttggtgcaggtcgggaactgattcggc 46
||||||||||||||||||||||||| |||||||
Sbjct: 10 gattcgcttggtgcaggtcgggaaccaattcggc 43
>46957_ath-miR168a:pmrd
Length = 138
Score = 63.9 bits (32), Expect = 4e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 130 attggatcccgccttgcatcaactgaatcgga 161
||||||||||||||||||||||||||||||||
Sbjct: 96 attggatcccgccttgcatcaactgaatcgga 127
Score = 52.0 bits (26), Expect = 1e-07
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 13 gattcgcttggtgcaggtcgggaactgattcggc 46
||||||||||||||||||||||||| |||||||
Sbjct: 15 gattcgcttggtgcaggtcgggaaccaattcggc 48
>54802_vvi-miR168:pmrd
Length = 132
Score = 58.0 bits (29), Expect = 2e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 134 gatcccgccttgcatcaactgaatcggag 162
|||||||||||||||||||||||||||||
Sbjct: 99 gatcccgccttgcatcaactgaatcggag 127
Score = 56.0 bits (28), Expect = 9e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 6 ggtctctgattcgcttggtgcaggtcgggaac 37
||||||| ||||||||||||||||||||||||
Sbjct: 1 ggtctctaattcgcttggtgcaggtcgggaac 32
>55000_zma-miR168b:pmrd
Length = 104
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 133 ggatcccgccttgcatcaactgaatcggag 162
||||||||||||||||||| ||||||||||
Sbjct: 63 ggatcccgccttgcatcaagtgaatcggag 92
>46959_ath-miR168m:pmrd
Length = 104
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 130 attggatcccgccttgcatcaactga 155
||||||||||||||||||||||||||
Sbjct: 79 attggatcccgccttgcatcaactga 104
Score = 46.1 bits (23), Expect = 8e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 16 tcgcttggtgcaggtcgggaactgattcggc 46
|||||||||||||||||||||| |||||||
Sbjct: 1 tcgcttggtgcaggtcgggaaccaattcggc 31
>54546_sly-miR168:pmrd
Length = 145
Score = 48.1 bits (24), Expect = 2e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 16 tcgcttggtgcaggtcgggaactgattcggcg 47
|||||||||||||||||||| || ||||||||
Sbjct: 1 tcgcttggtgcaggtcgggacctcattcggcg 32
>48649_hte-miR168:pmrd
Length = 140
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 16 tcgcttggtgcaggtcgggaactg 39
||||||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcgggaactg 24
>54999_zma-miR168a:pmrd
Length = 104
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 133 ggatcccgccttgcatcaactgaatcggag 162
||||||||||||||| ||| ||||||||||
Sbjct: 63 ggatcccgccttgcaccaagtgaatcggag 92
>54637_sof-miR168b:pmrd
Length = 103
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 133 ggatcccgccttgcatcaactgaatcggag 162
||||||||||||||| ||| ||||||||||
Sbjct: 62 ggatcccgccttgcaccaagtgaatcggag 91
>54636_sof-miR168a:pmrd
Length = 104
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 133 ggatcccgccttgcatcaactgaatcggag 162
||||||||||||||| ||| ||||||||||
Sbjct: 63 ggatcccgccttgcaccaagtgaatcggag 92
>48873_osa-miR168a:pmrd
Length = 87
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 133 ggatcccgccttgcatcaactgaatcggag 162
||||||||||||||| ||| ||||||||||
Sbjct: 55 ggatcccgccttgcaccaagtgaatcggag 84
>48872_osa-miR168a:pmrd
Length = 87
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 133 ggatcccgccttgcatcaactgaatcggag 162
||||||||||||||| ||| ||||||||||
Sbjct: 55 ggatcccgccttgcaccaagtgaatcggag 84
>48871_osa-miR168a:pmrd
Length = 87
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 133 ggatcccgccttgcatcaactgaatcggag 162
||||||||||||||| ||| ||||||||||
Sbjct: 55 ggatcccgccttgcaccaagtgaatcggag 84
>54665_stu-miR168:pmrd
Length = 133
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 131 ttggatcccgccttgcatcaactga 155
|||| ||||||||||||||||||||
Sbjct: 109 ttgggtcccgccttgcatcaactga 133
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 16 tcgcttggtgcaggtcggga 35
||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcggga 20
