miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>51350_ppl-miR167b:pmrd
Length = 431
Score = 842 bits (425), Expect = 0.0
Identities = 431/431 (100%)
Strand = Plus / Plus
Query: 22 tttgagaggttgaagctgccagcatgatctggtaatgaacgtgttactctcatttatata 81
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tttgagaggttgaagctgccagcatgatctggtaatgaacgtgttactctcatttatata 60
Query: 82 tatattaacattaatcttatagcagtatctgtaggtagaaaaaatttaatgttgtcaaag 141
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tatattaacattaatcttatagcagtatctgtaggtagaaaaaatttaatgttgtcaaag 120
Query: 142 atatatactgaatcgtggttgctaggtttgtattactagtttaggatgcatgtttttgat 201
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 atatatactgaatcgtggttgctaggtttgtattactagtttaggatgcatgtttttgat 180
Query: 202 cttatgatgatcaattgcttgtgagttcctaggcaatgaaaacagaatatatactggtga 261
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 cttatgatgatcaattgcttgtgagttcctaggcaatgaaaacagaatatatactggtga 240
Query: 262 tttttcccagtaaaattgtcgagaaaagggaattgcactaatagggaagacgcataggta 321
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tttttcccagtaaaattgtcgagaaaagggaattgcactaatagggaagacgcataggta 300
Query: 322 aacttgtatctaaatggtatatgtatnttccaggcaaaagggtagaaacctaatnagaaa 381
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aacttgtatctaaatggtatatgtatnttccaggcaaaagggtagaaacctaatnagaaa 360
Query: 382 ctagcttgaactcagagctataaaagtatatggttccatcaggtcatctagcagcttcaa 441
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ctagcttgaactcagagctataaaagtatatggttccatcaggtcatctagcagcttcaa 420
Query: 442 tcactcactca 452
|||||||||||
Sbjct: 421 tcactcactca 431
>54373_pts-miR167:pmrd
Length = 409
Score = 799 bits (403), Expect = 0.0
Identities = 409/409 (100%)
Strand = Plus / Plus
Query: 32 tgaagctgccagcatgatctggtaatgaacgtgttactctcatttatatatatattaaca 91
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgaagctgccagcatgatctggtaatgaacgtgttactctcatttatatatatattaaca 60
Query: 92 ttaatcttatagcagtatctgtaggtagaaaaaatttaatgttgtcaaagatatatactg 151
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttaatcttatagcagtatctgtaggtagaaaaaatttaatgttgtcaaagatatatactg 120
Query: 152 aatcgtggttgctaggtttgtattactagtttaggatgcatgtttttgatcttatgatga 211
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aatcgtggttgctaggtttgtattactagtttaggatgcatgtttttgatcttatgatga 180
Query: 212 tcaattgcttgtgagttcctaggcaatgaaaacagaatatatactggtgatttttcccag 271
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tcaattgcttgtgagttcctaggcaatgaaaacagaatatatactggtgatttttcccag 240
Query: 272 taaaattgtcgagaaaagggaattgcactaatagggaagacgcataggtaaacttgtatc 331
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 taaaattgtcgagaaaagggaattgcactaatagggaagacgcataggtaaacttgtatc 300
Query: 332 taaatggtatatgtatnttccaggcaaaagggtagaaacctaatnagaaactagcttgaa 391
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 taaatggtatatgtatnttccaggcaaaagggtagaaacctaatnagaaactagcttgaa 360
Query: 392 ctcagagctataaaagtatatggttccatcaggtcatctagcagcttca 440
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ctcagagctataaaagtatatggttccatcaggtcatctagcagcttca 409
>48559_gma-miR167o:pmrd
Length = 109
Score = 75.8 bits (38), Expect = 3e-14
Identities = 38/38 (100%)
Strand = Plus / Plus
Query: 15 atgttggtttgagaggttgaagctgccagcatgatctg 52
||||||||||||||||||||||||||||||||||||||
Sbjct: 72 atgttggtttgagaggttgaagctgccagcatgatctg 109
>48556_gma-miR167c:pmrd
Length = 375
Score = 69.9 bits (35), Expect = 2e-12
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 22 tttgagaggttgaagctgccagcatgatctggtaa 56
|||||||||||||||||||||||||||||||||||
Sbjct: 1 tttgagaggttgaagctgccagcatgatctggtaa 35
Score = 60.0 bits (30), Expect = 2e-09
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 415 ttccatcaggtcatctagcagcttcaatcactca 448
|||||||||||||||| |||||||||||||||||
Sbjct: 340 ttccatcaggtcatcttgcagcttcaatcactca 373
>54797_vvi-miR167a:pmrd
Length = 351
Score = 65.9 bits (33), Expect = 3e-11
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 22 tttgagaggttgaagctgccagcatgatctggt 54
|||||||||||||||||||||||||||||||||
Sbjct: 1 tttgagaggttgaagctgccagcatgatctggt 33
Score = 60.0 bits (30), Expect = 2e-09
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 419 atcaggtcatctagcagcttcaatcactcactca 452
|||||||||||| |||||||||||||||||||||
Sbjct: 318 atcaggtcatcttgcagcttcaatcactcactca 351
>54429_sbi-miR167c:pmrd
Length = 133
Score = 63.9 bits (32), Expect = 1e-10
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 19 tggtttgagaggttgaagctgccagcatgatctggt 54
|||| |||||||||||||||||||||||||||||||
Sbjct: 8 tggtgtgagaggttgaagctgccagcatgatctggt 43
>54985_zma-miR167h:pmrd
Length = 143
Score = 60.0 bits (30), Expect = 2e-09
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 24 tgagaggttgaagctgccagcatgatctgg 53
||||||||||||||||||||||||||||||
Sbjct: 13 tgagaggttgaagctgccagcatgatctgg 42
>54986_zma-miR167i:pmrd
Length = 130
Score = 54.0 bits (27), Expect = 1e-07
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 19 tggtttgagaggttgaagctgccagcatgatctgg 53
|||| |||||| |||||||||||||||||||||||
Sbjct: 8 tggtgtgagagcttgaagctgccagcatgatctgg 42
>48867_osa-miR167i:pmrd
Length = 201
Score = 54.0 bits (27), Expect = 1e-07
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 24 tgagaggttgaagctgccagcatgatctggt 54
||||||| |||||||||||||||||||||||
Sbjct: 3 tgagaggctgaagctgccagcatgatctggt 33
>46956_ath-miR167m:pmrd
Length = 342
Score = 52.0 bits (26), Expect = 4e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 32 tgaagctgccagcatgatctggtaat 57
||||||||||||||||||||||||||
Sbjct: 1 tgaagctgccagcatgatctggtaat 26
>46955_ath-miR167d:pmrd
Length = 377
Score = 52.0 bits (26), Expect = 4e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 32 tgaagctgccagcatgatctggtaat 57
||||||||||||||||||||||||||
Sbjct: 18 tgaagctgccagcatgatctggtaat 43
>48673_ini-miR167:pmrd
Length = 271
Score = 50.1 bits (25), Expect = 2e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 32 tgaagctgccagcatgatctggtaa 56
|||||||||||||||||||||||||
Sbjct: 1 tgaagctgccagcatgatctggtaa 25
>54984_zma-miR167g:pmrd
Length = 243
Score = 48.1 bits (24), Expect = 6e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 32 tgaagctgccagcatgatctggtaatga 59
||||||||||||||||||||||| ||||
Sbjct: 21 tgaagctgccagcatgatctggttatga 48
>51646_ptc-miR167e:pmrd
Length = 91
Score = 46.1 bits (23), Expect = 2e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 30 gttgaagctgccagcatgatctg 52
|||||||||||||||||||||||
Sbjct: 9 gttgaagctgccagcatgatctg 31
>48863_osa-miR167e:pmrd
Length = 273
Score = 46.1 bits (23), Expect = 2e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 32 tgaagctgccagcatgatctggt 54
|||||||||||||||||||||||
Sbjct: 11 tgaagctgccagcatgatctggt 33
>48678_lja-miR167:pmrd
Length = 108
Score = 46.1 bits (23), Expect = 2e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 30 gttgaagctgccagcatgatctg 52
|||||||||||||||||||||||
Sbjct: 19 gttgaagctgccagcatgatctg 41
>48420_cle-miR167:pmrd
Length = 96
Score = 46.1 bits (23), Expect = 2e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 30 gttgaagctgccagcatgatctg 52
|||||||||||||||||||||||
Sbjct: 9 gttgaagctgccagcatgatctg 31
>54988_zma-miR167k:pmrd
Length = 91
Score = 44.1 bits (22), Expect = 1e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 32 tgaagctgccagcatgatctgg 53
||||||||||||||||||||||
Sbjct: 1 tgaagctgccagcatgatctgg 22
>54987_zma-miR167j:pmrd
Length = 91
Score = 44.1 bits (22), Expect = 1e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 32 tgaagctgccagcatgatctgg 53
||||||||||||||||||||||
Sbjct: 1 tgaagctgccagcatgatctgg 22
>54801_vvi-miR167e:pmrd
Length = 90
Score = 44.1 bits (22), Expect = 1e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 30 gttgaagctgccagcatgatct 51
||||||||||||||||||||||
Sbjct: 9 gttgaagctgccagcatgatct 30
>54799_vvi-miR167c:pmrd
Length = 91
Score = 44.1 bits (22), Expect = 1e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 30 gttgaagctgccagcatgatct 51
||||||||||||||||||||||
Sbjct: 9 gttgaagctgccagcatgatct 30
>54798_vvi-miR167b:pmrd
Length = 99
Score = 44.1 bits (22), Expect = 1e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 30 gttgaagctgccagcatgatct 51
||||||||||||||||||||||
Sbjct: 9 gttgaagctgccagcatgatct 30
>54545_sly-miR167:pmrd
Length = 116
Score = 44.1 bits (22), Expect = 1e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 30 gttgaagctgccagcatgatct 51
||||||||||||||||||||||
Sbjct: 17 gttgaagctgccagcatgatct 38
>51648_ptc-miR167g:pmrd
Length = 86
Score = 44.1 bits (22), Expect = 1e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 30 gttgaagctgccagcatgatct 51
||||||||||||||||||||||
Sbjct: 9 gttgaagctgccagcatgatct 30
>51647_ptc-miR167f:pmrd
Length = 87
Score = 44.1 bits (22), Expect = 1e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 30 gttgaagctgccagcatgatct 51
||||||||||||||||||||||
Sbjct: 9 gttgaagctgccagcatgatct 30
>51644_ptc-miR167c:pmrd
Length = 89
Score = 44.1 bits (22), Expect = 1e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 30 gttgaagctgccagcatgatct 51
||||||||||||||||||||||
Sbjct: 9 gttgaagctgccagcatgatct 30
>51642_ptc-miR167a:pmrd
Length = 89
Score = 44.1 bits (22), Expect = 1e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 30 gttgaagctgccagcatgatct 51
||||||||||||||||||||||
Sbjct: 9 gttgaagctgccagcatgatct 30
>54990_zma-miR167m:pmrd
Length = 80
Score = 42.1 bits (21), Expect = 4e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 32 tgaagctgccagcatgatctg 52
|||||||||||||||||||||
Sbjct: 1 tgaagctgccagcatgatctg 21
>54989_zma-miR167l:pmrd
Length = 80
Score = 42.1 bits (21), Expect = 4e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 32 tgaagctgccagcatgatctg 52
|||||||||||||||||||||
Sbjct: 1 tgaagctgccagcatgatctg 21
>54983_zma-miR167f:pmrd
Length = 119
Score = 42.1 bits (21), Expect = 4e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 32 tgaagctgccagcatgatctg 52
|||||||||||||||||||||
Sbjct: 21 tgaagctgccagcatgatctg 41
>54982_zma-miR167e:pmrd
Length = 119
Score = 42.1 bits (21), Expect = 4e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 32 tgaagctgccagcatgatctg 52
|||||||||||||||||||||
Sbjct: 21 tgaagctgccagcatgatctg 41
>54654_ssp-miR167:pmrd
Length = 139
Score = 42.1 bits (21), Expect = 4e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 32 tgaagctgccagcatgatctg 52
|||||||||||||||||||||
Sbjct: 1 tgaagctgccagcatgatctg 21
>54635_sof-miR167b:pmrd
Length = 188
Score = 42.1 bits (21), Expect = 4e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 32 tgaagctgccagcatgatctg 52
|||||||||||||||||||||
Sbjct: 21 tgaagctgccagcatgatctg 41
>54634_sof-miR167a:pmrd
Length = 188
Score = 42.1 bits (21), Expect = 4e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 32 tgaagctgccagcatgatctg 52
|||||||||||||||||||||
Sbjct: 21 tgaagctgccagcatgatctg 41
>54434_sbi-miR167h:pmrd
Length = 90
Score = 42.1 bits (21), Expect = 4e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 32 tgaagctgccagcatgatctg 52
|||||||||||||||||||||
Sbjct: 1 tgaagctgccagcatgatctg 21
>54433_sbi-miR167g:pmrd
Length = 123
Score = 42.1 bits (21), Expect = 4e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 32 tgaagctgccagcatgatctg 52
|||||||||||||||||||||
Sbjct: 21 tgaagctgccagcatgatctg 41
>54432_sbi-miR167f:pmrd
Length = 179
Score = 42.1 bits (21), Expect = 4e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 32 tgaagctgccagcatgatctg 52
|||||||||||||||||||||
Sbjct: 21 tgaagctgccagcatgatctg 41
>54431_sbi-miR167e:pmrd
Length = 179
Score = 42.1 bits (21), Expect = 4e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 32 tgaagctgccagcatgatctg 52
|||||||||||||||||||||
Sbjct: 21 tgaagctgccagcatgatctg 41
>54430_sbi-miR167d:pmrd
Length = 148
Score = 42.1 bits (21), Expect = 4e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 32 tgaagctgccagcatgatctg 52
|||||||||||||||||||||
Sbjct: 21 tgaagctgccagcatgatctg 41
>50425_osa-miRf11210-akr:pmrd
Length = 112
Score = 42.1 bits (21), Expect = 4e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 32 tgaagctgccagcatgatctg 52
|||||||||||||||||||||
Sbjct: 12 tgaagctgccagcatgatctg 32
>50424_osa-miRf11209-akr:pmrd
Length = 124
Score = 42.1 bits (21), Expect = 4e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 32 tgaagctgccagcatgatctg 52
|||||||||||||||||||||
Sbjct: 18 tgaagctgccagcatgatctg 38
>49693_osa-miRf10478-akr:pmrd
Length = 97
Score = 42.1 bits (21), Expect = 4e-04
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 32 tgaagctgccagcatgatctg 52
|||||||||||||||||||||
Sbjct: 80 tgaagctgccagcatgatctg 60
>49692_osa-miRf10477-akr:pmrd
Length = 97
Score = 42.1 bits (21), Expect = 4e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 32 tgaagctgccagcatgatctg 52
|||||||||||||||||||||
Sbjct: 18 tgaagctgccagcatgatctg 38
>48870_osa-miR167n:pmrd
Length = 90
Score = 42.1 bits (21), Expect = 4e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 32 tgaagctgccagcatgatctg 52
|||||||||||||||||||||
Sbjct: 1 tgaagctgccagcatgatctg 21
>48869_osa-miR167m:pmrd
Length = 100
Score = 42.1 bits (21), Expect = 4e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 32 tgaagctgccagcatgatctg 52
|||||||||||||||||||||
Sbjct: 1 tgaagctgccagcatgatctg 21
>48868_osa-miR167j:pmrd
Length = 160
Score = 42.1 bits (21), Expect = 4e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 32 tgaagctgccagcatgatctg 52
|||||||||||||||||||||
Sbjct: 26 tgaagctgccagcatgatctg 46
>48866_osa-miR167h:pmrd
Length = 120
Score = 42.1 bits (21), Expect = 4e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 32 tgaagctgccagcatgatctg 52
|||||||||||||||||||||
Sbjct: 11 tgaagctgccagcatgatctg 31
>48865_osa-miR167g:pmrd
Length = 82
Score = 42.1 bits (21), Expect = 4e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 32 tgaagctgccagcatgatctg 52
|||||||||||||||||||||
Sbjct: 11 tgaagctgccagcatgatctg 31
>48864_osa-miR167f:pmrd
Length = 113
Score = 42.1 bits (21), Expect = 4e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 32 tgaagctgccagcatgatctg 52
|||||||||||||||||||||
Sbjct: 11 tgaagctgccagcatgatctg 31
>48862_osa-miR167d:pmrd
Length = 110
Score = 42.1 bits (21), Expect = 4e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 32 tgaagctgccagcatgatctg 52
|||||||||||||||||||||
Sbjct: 11 tgaagctgccagcatgatctg 31
>48558_gma-miR167n:pmrd
Length = 64
Score = 42.1 bits (21), Expect = 4e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 32 tgaagctgccagcatgatctg 52
|||||||||||||||||||||
Sbjct: 1 tgaagctgccagcatgatctg 21
