miRNEST 2.0, an integrative microRNA resource :: BLAST
>51741_ptc-miR397a:pmrd
Length = 120
Score = 186 bits (94), Expect = 3e-48
Identities = 114/120 (95%), Gaps = 3/120 (2%)
Strand = Plus / Plus
Query: 12 tggagaaccatcattgagtgcagcgttgatgaaatcctacattttgtgctcttaaactgt 71
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Sbjct: 1 tggagaaccatcattgagtgcagcgttgatgaaatcctccattttgtgctattaaactgt 60
Query: 72 taccaaccctttat---ccatggcatcatttcaccagcgctgcattcaatcatgtttttc 128
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Sbjct: 61 taccaaccctttatggggcatggcatcatttcaccagcgctgcattcaatcatgtttttc 120
>51742_ptc-miR397b:pmrd
Length = 114
Score = 63.9 bits (32), Expect = 3e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 93 atcatttcaccagcgctgcattcaatcatgtttttc 128
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Sbjct: 79 atcatttcaccagcgctgcattcaaccatgtttttc 114
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 23 cattgagtgcagcgttgatgaaat 46
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Sbjct: 12 cattgagtgcagcgttgatgaaat 35
>54873_vvi-miR397b:pmrd
Length = 118
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 20 catcattgagtgcagcgttgatgaaa 45
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Sbjct: 9 catcattgagtgcagcgttgatgaaa 34
>54872_vvi-miR397a:pmrd
Length = 118
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 20 catcattgagtgcagcgttgatgaaa 45
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Sbjct: 9 catcattgagtgcagcgttgatgaaa 34
>48959_osa-miR397a:pmrd
Length = 114
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 20 catcattgagtgcagcgttgatgaa 44
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Sbjct: 9 catcattgagtgcagcgttgatgaa 33
>48958_osa-miR397a:pmrd
Length = 114
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 20 catcattgagtgcagcgttgatgaa 44
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Sbjct: 9 catcattgagtgcagcgttgatgaa 33
>48334_bdi-miR2508:pmrd
Length = 99
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 20 catcattgagtgcagcgttgatgaa 44
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Sbjct: 8 catcattgagtgcagcgttgatgaa 32
>48315_bdi-miR397:pmrd
Length = 124
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 20 catcattgagtgcagcgttgatgaa 44
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Sbjct: 16 catcattgagtgcagcgttgatgaa 40
>48376_bna-miR397b:pmrd
Length = 96
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 20 catcattgagtgcagcgttgatg 42
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Sbjct: 4 catcattgagtgcagcgttgatg 26
>48375_bna-miR397a:pmrd
Length = 96
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 20 catcattgagtgcagcgttgatg 42
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Sbjct: 4 catcattgagtgcagcgttgatg 26
>47010_ath-miR397a:pmrd
Length = 107
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 20 catcattgagtgcagcgttgatg 42
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Sbjct: 9 catcattgagtgcagcgttgatg 31
>54748_tae-miR2029:pmrd
Length = 71
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 24 attgagtgcagcgttgatgaa 44
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Sbjct: 1 attgagtgcagcgttgatgaa 21
>54560_sly-miR397:pmrd
Length = 116
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 15 agaaccatcattgagtgcagcgttgatga 43
|||| ||| ||||||||||||||||||||
Sbjct: 11 agaaacatgattgagtgcagcgttgatga 39
>48961_osa-miR397b:pmrd
Length = 118
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 24 attgagtgcagcgttgatgaa 44
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Sbjct: 13 attgagtgcagcgttgatgaa 33
>48960_osa-miR397b:pmrd
Length = 118
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 24 attgagtgcagcgttgatgaa 44
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Sbjct: 13 attgagtgcagcgttgatgaa 33
>47011_ath-miR397b:pmrd
Length = 109
Score = 40.1 bits (20), Expect = 4e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 103 cagcgctgcattcaatcatgtttttcta 130
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Sbjct: 82 cagcgttgcattcaattatgtttttcta 109
