miRNEST 2.0, an integrative microRNA resource :: BLAST
>51807_ptc-miR530b:pmrd
Length = 172
Score = 280 bits (141), Expect = 4e-76
Identities = 166/173 (95%), Gaps = 1/173 (0%)
Strand = Plus / Plus
Query: 11 gccaatatgttgcctttatctgcatttgcacctgcatcttattgcttttgttttgttctt 70
|||||||||||||||||||||||||||||||||||||||| |||| ||||||||||| ||
Sbjct: 1 gccaatatgttgcctttatctgcatttgcacctgcatctt-ttgcgtttgttttgttttt 59
Query: 71 gactccacaaacaaaatcaacttctgtcgatacagtatgtggtacaattagctatggaaa 130
|||||||||||||||||||| ||||||||||||||||||||| |||||||| ||||||||
Sbjct: 60 gactccacaaacaaaatcaagttctgtcgatacagtatgtgggacaattagatatggaaa 119
Query: 131 ctcataagcttagttgaggtgcaggtgcaagtgcaggtgaatgccattttggt 183
|| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120 ctaataagcttagttgaggtgcaggtgcaagtgcaggtgaatgccattttggt 172
>53341_ptc-miRf11519-akr:pmrd
Length = 152
Score = 240 bits (121), Expect = 3e-64
Identities = 146/153 (95%), Gaps = 1/153 (0%)
Strand = Plus / Plus
Query: 22 gcctttatctgcatttgcacctgcatcttattgcttttgttttgttcttgactccacaaa 81
||||||||||||||||||||||||||||| |||| ||||||||||| |||||||||||||
Sbjct: 1 gcctttatctgcatttgcacctgcatctt-ttgcgtttgttttgtttttgactccacaaa 59
Query: 82 caaaatcaacttctgtcgatacagtatgtggtacaattagctatggaaactcataagctt 141
||||||||| ||||||||||||||||||||| |||||||| |||||||||| ||||||||
Sbjct: 60 caaaatcaagttctgtcgatacagtatgtgggacaattagatatggaaactaataagctt 119
Query: 142 agttgaggtgcaggtgcaagtgcaggtgaatgc 174
|||||||||||||||||||||||||||||||||
Sbjct: 120 agttgaggtgcaggtgcaagtgcaggtgaatgc 152
>51806_ptc-miR530a:pmrd
Length = 144
Score = 65.9 bits (33), Expect = 1e-11
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 11 gccaatatgttgcctttatctgcatttgcacctgcatctta 51
||||| |||||||||||||||||||||||||||||| ||||
Sbjct: 1 gccaacatgttgcctttatctgcatttgcacctgcacctta 41
Score = 63.9 bits (32), Expect = 4e-11
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 144 ttgaggtgcaggtgcaagtgcaggtgaatgccattttggt 183
|||||||||||||||| ||||||||||||||||| |||||
Sbjct: 105 ttgaggtgcaggtgcaggtgcaggtgaatgccatgttggt 144
>52847_ptc-miRf11025-akr:pmrd
Length = 138
Score = 61.9 bits (31), Expect = 2e-10
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 17 atgttgcctttatctgcatttgcacctgcatctta 51
|||||||||||||||||||||||||||||| ||||
Sbjct: 4 atgttgcctttatctgcatttgcacctgcacctta 38
Score = 60.0 bits (30), Expect = 7e-10
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 144 ttgaggtgcaggtgcaagtgcaggtgaatgccat 177
|||||||||||||||| |||||||||||||||||
Sbjct: 102 ttgaggtgcaggtgcaggtgcaggtgaatgccat 135
>52848_ptc-miRf11026-akr:pmrd
Length = 124
Score = 54.0 bits (27), Expect = 4e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 144 ttgaggtgcaggtgcaagtgcaggtgaatgc 174
|||||||||||||||| ||||||||||||||
Sbjct: 94 ttgaggtgcaggtgcaggtgcaggtgaatgc 124
Score = 52.0 bits (26), Expect = 2e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 22 gcctttatctgcatttgcacctgcatctta 51
||||||||||||||||||||||||| ||||
Sbjct: 1 gcctttatctgcatttgcacctgcacctta 30
>51904_ptc-miRf10082-akr:pmrd
Length = 118
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 144 ttgaggtgcaggtgcaagtgcaggtgaa 171
|||||||||||||||| |||||||||||
Sbjct: 91 ttgaggtgcaggtgcaggtgcaggtgaa 118
Score = 46.1 bits (23), Expect = 1e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 25 tttatctgcatttgcacctgcatctta 51
|||||||||||||||||||||| ||||
Sbjct: 1 tttatctgcatttgcacctgcacctta 27
>46904_aqc-miR530:pmrd
Length = 142
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 29 tctgcatttgcacctgcatct 49
|||||||||||||||||||||
Sbjct: 10 tctgcatttgcacctgcatct 30