miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>53731_ptc-miRf11909-akr:pmrd
Length = 74
Score = 50.1 bits (25), Expect = 5e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 52 aaccgaaccgaaccgaaaatgctcggtttgaac 84
|||||||||||||||||| || |||||||||||
Sbjct: 11 aaccgaaccgaaccgaaactggtcggtttgaac 43
>53395_ptc-miRf11573-akr:pmrd
Length = 74
Score = 50.1 bits (25), Expect = 5e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 52 aaccgaaccgaaccgaaaatgctcggtttgaac 84
|||||||||||||||||| || |||||||||||
Sbjct: 11 aaccgaaccgaaccgaaactggtcggtttgaac 43
>54220_ptc-miRf12398-akr:pmrd
Length = 69
Score = 46.1 bits (23), Expect = 8e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 52 aaccgaaccgaaccgaaaatgctcggtttga 82
|||||||||||||||||| || |||||||||
Sbjct: 8 aaccgaaccgaaccgaaactggtcggtttga 38
>52930_ptc-miRf11108-akr:pmrd
Length = 79
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 46 tcaattaaccgaaccgaaccgaa 68
|||||||||||||||||||||||
Sbjct: 1 tcaattaaccgaaccgaaccgaa 23
>54339_ptc-miRf12517-akr:pmrd
Length = 92
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 49 attaaccgaaccgaaccgaaa 69
|||||||||||||||||||||
Sbjct: 25 attaaccgaaccgaaccgaaa 5
>54074_ptc-miRf12252-akr:pmrd
Length = 92
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 49 attaaccgaaccgaaccgaaa 69
|||||||||||||||||||||
Sbjct: 25 attaaccgaaccgaaccgaaa 5
>52512_ptc-miRf10690-akr:pmrd
Length = 120
Score = 42.1 bits (21), Expect = 1e-04
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 52 aaccgaaccgaaccgaaaatgctcggtttgaac 84
|||||||||||||||||| | |||||||||||
Sbjct: 22 aaccgaaccgaaccgaaaccgatcggtttgaac 54
