miRNEST 2.0, an integrative microRNA resource :: BLAST
>51651_ptc-miR168b:pmrd
Length = 136
Score = 262 bits (132), Expect = 7e-71
Identities = 135/136 (99%)
Strand = Plus / Plus
Query: 15 ggtctctaattcgcttggtgcaggtcgggaactgattcagcgatttgattgccagatggc 74
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 1 ggtctctaattcgcttggtgcaggtcgggaactgattcggcgatttgattgccagatggc 60
Query: 75 taaacacgattggctgtgaggcaaattataaaaagaaagagaattggatcccgccttgca 134
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 taaacacgattggctgtgaggcaaattataaaaagaaagagaattggatcccgccttgca 120
Query: 135 tcaactgaatcggaga 150
||||||||||||||||
Sbjct: 121 tcaactgaatcggaga 136
>54374_pts-miR168a:pmrd
Length = 118
Score = 218 bits (110), Expect = 1e-57
Identities = 116/118 (98%)
Strand = Plus / Plus
Query: 25 tcgcttggtgcaggtcgggaactgattcagcgatttgattgccagatggctaaacacgat 84
|||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcgggaactgattctgcgatttcattgccagatggctaaacacgat 60
Query: 85 tggctgtgaggcaaattataaaaagaaagagaattggatcccgccttgcatcaactga 142
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tggctgtgaggcaaattataaaaagaaagagaattggatcccgccttgcatcaactga 118
>54366_ptr-miR168:pmrd
Length = 118
Score = 218 bits (110), Expect = 1e-57
Identities = 116/118 (98%)
Strand = Plus / Plus
Query: 25 tcgcttggtgcaggtcgggaactgattcagcgatttgattgccagatggctaaacacgat 84
|||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcgggaactgattctgcgatttcattgccagatggctaaacacgat 60
Query: 85 tggctgtgaggcaaattataaaaagaaagagaattggatcccgccttgcatcaactga 142
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tggctgtgaggcaaattataaaaagaaagagaattggatcccgccttgcatcaactga 118
>51650_ptc-miR168a:pmrd
Length = 160
Score = 105 bits (53), Expect = 1e-23
Identities = 59/61 (96%)
Strand = Plus / Plus
Query: 15 ggtctctaattcgcttggtgcaggtcgggaactgattcagcgatttgattgccagatggc 74
||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 1 ggtctctgattcgcttggtgcaggtcgggaactgattcggcgatttgattgccagatggc 60
Query: 75 t 75
|
Sbjct: 61 t 61
Score = 69.9 bits (35), Expect = 6e-13
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 115 gaattggatcccgccttgcatcaactgaatcggag 149
|||||||||||||||||||||||||||||||||||
Sbjct: 125 gaattggatcccgccttgcatcaactgaatcggag 159
>54388_rco-miR168:pmrd
Length = 156
Score = 89.7 bits (45), Expect = 6e-19
Identities = 45/45 (100%)
Strand = Plus / Plus
Query: 7 ttaccggcggtctctaattcgcttggtgcaggtcgggaactgatt 51
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttaccggcggtctctaattcgcttggtgcaggtcgggaactgatt 45
Score = 81.8 bits (41), Expect = 1e-16
Identities = 50/53 (94%)
Strand = Plus / Plus
Query: 109 gaaagagaattggatcccgccttgcatcaactgaatcggagaccgcggtgaag 161
||||| |||||||||||||||||||||||||||||||| |||||| |||||||
Sbjct: 104 gaaagtgaattggatcccgccttgcatcaactgaatcgaagaccggggtgaag 156
>54375_pts-miR168b:pmrd
Length = 140
Score = 85.7 bits (43), Expect = 1e-17
Identities = 49/51 (96%)
Strand = Plus / Plus
Query: 25 tcgcttggtgcaggtcgggaactgattcagcgatttgattgccagatggct 75
|||||||||||||||||||||||||||| |||||||||||||||| |||||
Sbjct: 1 tcgcttggtgcaggtcgggaactgattcggcgatttgattgccagctggct 51
Score = 56.0 bits (28), Expect = 9e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 115 gaattggatcccgccttgcatcaactga 142
||||||||||||||||||||||||||||
Sbjct: 113 gaattggatcccgccttgcatcaactga 140
>48560_gma-miR168:pmrd
Length = 125
Score = 83.8 bits (42), Expect = 4e-17
Identities = 45/46 (97%)
Strand = Plus / Plus
Query: 115 gaattggatcccgccttgcatcaactgaatcggagaccgcggtgaa 160
||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 79 gaattggatcccgccttgcatcaactgaatcggaggccgcggtgaa 124
Score = 67.9 bits (34), Expect = 2e-12
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 13 gcggtctctaattcgcttggtgcaggtcgggaac 46
||||||||||||||||||||||||||||||||||
Sbjct: 7 gcggtctctaattcgcttggtgcaggtcgggaac 40
>46958_ath-miR168b:pmrd
Length = 124
Score = 73.8 bits (37), Expect = 4e-14
Identities = 43/45 (95%)
Strand = Plus / Plus
Query: 7 ttaccggcggtctctaattcgcttggtgcaggtcgggaactgatt 51
|||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 1 ttaccggcggtctcggattcgcttggtgcaggtcgggaactgatt 45
Score = 42.1 bits (21), Expect = 1e-04
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 123 tcccgccttgcatcaactgaatcggagaccgcggtga 159
||||| |||| |||||||||||||||| ||| |||||
Sbjct: 88 tcccgtcttgtatcaactgaatcggagtccgaggtga 124
>54802_vvi-miR168:pmrd
Length = 132
Score = 63.9 bits (32), Expect = 4e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 15 ggtctctaattcgcttggtgcaggtcgggaac 46
||||||||||||||||||||||||||||||||
Sbjct: 1 ggtctctaattcgcttggtgcaggtcgggaac 32
Score = 61.9 bits (31), Expect = 1e-10
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 121 gatcccgccttgcatcaactgaatcggagac 151
|||||||||||||||||||||||||||||||
Sbjct: 99 gatcccgccttgcatcaactgaatcggagac 129
>47339_ath-miRf10239-akr:pmrd
Length = 129
Score = 63.9 bits (32), Expect = 4e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 117 attggatcccgccttgcatcaactgaatcgga 148
||||||||||||||||||||||||||||||||
Sbjct: 91 attggatcccgccttgcatcaactgaatcgga 122
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 23 attcgcttggtgcaggtcgggaac 46
||||||||||||||||||||||||
Sbjct: 11 attcgcttggtgcaggtcgggaac 34
>46957_ath-miR168a:pmrd
Length = 138
Score = 63.9 bits (32), Expect = 4e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 117 attggatcccgccttgcatcaactgaatcgga 148
||||||||||||||||||||||||||||||||
Sbjct: 96 attggatcccgccttgcatcaactgaatcgga 127
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 23 attcgcttggtgcaggtcgggaac 46
||||||||||||||||||||||||
Sbjct: 16 attcgcttggtgcaggtcgggaac 39
>48349_bna-miR168:pmrd
Length = 133
Score = 58.0 bits (29), Expect = 2e-09
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 11 cggcggtctctaattcgcttggtgcaggtcgggaactgatt 51
|||||| |||| | |||||||||||||||||||||||||||
Sbjct: 4 cggcggcctctgactcgcttggtgcaggtcgggaactgatt 44
>55000_zma-miR168b:pmrd
Length = 104
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 120 ggatcccgccttgcatcaactgaatcggag 149
||||||||||||||||||| ||||||||||
Sbjct: 63 ggatcccgccttgcatcaagtgaatcggag 92
>46959_ath-miR168m:pmrd
Length = 104
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 117 attggatcccgccttgcatcaactga 142
||||||||||||||||||||||||||
Sbjct: 79 attggatcccgccttgcatcaactga 104
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 25 tcgcttggtgcaggtcgggaac 46
||||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcgggaac 22
>48649_hte-miR168:pmrd
Length = 140
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 25 tcgcttggtgcaggtcgggaactg 48
||||||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcgggaactg 24
>54999_zma-miR168a:pmrd
Length = 104
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 120 ggatcccgccttgcatcaactgaatcggag 149
||||||||||||||| ||| ||||||||||
Sbjct: 63 ggatcccgccttgcaccaagtgaatcggag 92
>54637_sof-miR168b:pmrd
Length = 103
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 120 ggatcccgccttgcatcaactgaatcggag 149
||||||||||||||| ||| ||||||||||
Sbjct: 62 ggatcccgccttgcaccaagtgaatcggag 91
>54636_sof-miR168a:pmrd
Length = 104
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 120 ggatcccgccttgcatcaactgaatcggag 149
||||||||||||||| ||| ||||||||||
Sbjct: 63 ggatcccgccttgcaccaagtgaatcggag 92
>48873_osa-miR168a:pmrd
Length = 87
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 120 ggatcccgccttgcatcaactgaatcggag 149
||||||||||||||| ||| ||||||||||
Sbjct: 55 ggatcccgccttgcaccaagtgaatcggag 84
>48872_osa-miR168a:pmrd
Length = 87
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 120 ggatcccgccttgcatcaactgaatcggag 149
||||||||||||||| ||| ||||||||||
Sbjct: 55 ggatcccgccttgcaccaagtgaatcggag 84
>48871_osa-miR168a:pmrd
Length = 87
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 120 ggatcccgccttgcatcaactgaatcggag 149
||||||||||||||| ||| ||||||||||
Sbjct: 55 ggatcccgccttgcaccaagtgaatcggag 84
>54665_stu-miR168:pmrd
Length = 133
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 118 ttggatcccgccttgcatcaactga 142
|||| ||||||||||||||||||||
Sbjct: 109 ttgggtcccgccttgcatcaactga 133
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 25 tcgcttggtgcaggtcggga 44
||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcggga 20
>54546_sly-miR168:pmrd
Length = 145
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 25 tcgcttggtgcaggtcggga 44
||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcggga 20
