miRNEST 2.0, an integrative microRNA resource :: BLAST
>48529_gma-miR156b:pmrd
Length = 120
Score = 83.8 bits (42), Expect = 3e-17
Identities = 81/94 (86%)
Strand = Plus / Plus
Query: 27 tcatgttgacagaagaaagagagcacaacccgccattggccaaagagatcttcgccactg 86
|||||||||||||||| ||||||||||||||| | |||| |||| |||| ||| ||
Sbjct: 15 tcatgttgacagaagagagagagcacaacccgggaatggctaaaggagtctttgcctttg 74
Query: 87 ttgggagtgtgctctctcttcttctgtcatcatc 120
|||||||||||| |||||||| ||||||||||||
Sbjct: 75 ttgggagtgtgccctctcttcctctgtcatcatc 108
>54766_vvi-miR156a:pmrd
Length = 104
Score = 67.9 bits (34), Expect = 2e-12
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 87 ttgggagtgtgctctctcttcttctgtcatcatc 120
||||||||||||||||||||||||||||||||||
Sbjct: 64 ttgggagtgtgctctctcttcttctgtcatcatc 97
>48676_lja-miR157b:pmrd
Length = 86
Score = 60.0 bits (30), Expect = 5e-10
Identities = 73/86 (84%), Gaps = 1/86 (1%)
Strand = Plus / Plus
Query: 32 ttgacagaagaaagagagcacaacccgccattggccaaagaga-tcttcgccactgttgg 90
||||||||||| |||||||||||||| | ||| ||||||| |||| || ||||||
Sbjct: 1 ttgacagaagagagagagcacaacccaggaatggtgaaagagagtctttgcttttgttgg 60
Query: 91 gagtgtgctctctcttcttctgtcat 116
|||||||||||| |||||||||||||
Sbjct: 61 gagtgtgctctcccttcttctgtcat 86
>46903_aqc-miR529:pmrd
Length = 125
Score = 60.0 bits (30), Expect = 5e-10
Identities = 86/102 (84%), Gaps = 2/102 (1%)
Strand = Plus / Plus
Query: 20 tgagagatcatgttgacagaagaaagagagcacaacccgccattggccaaagaga-tctt 78
|||||||| |||||||||||||| |||||||||||||| ||| || ||||||| ||||
Sbjct: 6 tgagagat-atgttgacagaagagagagagcacaacccatcatcagctaaagagagtctt 64
Query: 79 cgccactgttgggagtgtgctctctcttcttctgtcatcatc 120
| ||||||||||||||||| | |||||||||||||||
Sbjct: 65 ttcttttgttgggagtgtgctctttgctcttctgtcatcatc 106
>46857_ahy-miR157k:pmrd
Length = 139
Score = 58.0 bits (29), Expect = 2e-09
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 85 tgttgggagtgtgctctctcttcttctgtcatcatct 121
||||||||||||||||||| ||||||||||||||||
Sbjct: 75 tgttgggagtgtgctctctactcttctgtcatcatct 111
>46917_ath-miR156h:pmrd
Length = 106
Score = 56.0 bits (28), Expect = 7e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 29 atgttgacagaagaaagagagcacaacc 56
||||||||||||||||||||||||||||
Sbjct: 8 atgttgacagaagaaagagagcacaacc 35
>54531_sin-miR157:pmrd
Length = 83
Score = 50.1 bits (25), Expect = 5e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 32 ttgacagaagaaagagagcacaacccgccattg 64
||||||||||| |||||||||| ||||||||||
Sbjct: 1 ttgacagaagagagagagcacagcccgccattg 33
>48530_gma-miR156c:pmrd
Length = 185
Score = 46.1 bits (23), Expect = 7e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 30 tgttgacagaagaaagagagcacaacc 56
||||||||||||| |||||||||||||
Sbjct: 144 tgttgacagaagatagagagcacaacc 170
>54771_vvi-miR156f:pmrd
Length = 105
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 30 tgttgacagaagaaagagagcacaac 55
||||||||||||| ||||||||||||
Sbjct: 9 tgttgacagaagatagagagcacaac 34
>54571_smo-miR156c:pmrd
Length = 100
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 32 ttgacagaagaaagagagcaca 53
||||||||||||||||||||||
Sbjct: 11 ttgacagaagaaagagagcaca 32
>48811_osa-miR156k:pmrd
Length = 106
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 33 tgacagaagaaagagagcacaacccg 58
|||||||||| |||||||||||||||
Sbjct: 11 tgacagaagagagagagcacaacccg 36
>54920_zma-miR156j:pmrd
Length = 125
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 33 tgacagaagaaagagagcacaaccc 57
|||||||||| ||||||||||||||
Sbjct: 21 tgacagaagagagagagcacaaccc 45
>54774_vvi-miR156i:pmrd
Length = 103
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 94 tgtgctctctcttcttctgtcatca 118
|||||||||| ||||||||||||||
Sbjct: 69 tgtgctctctattcttctgtcatca 93
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 30 tgttgacagaagaaagagagcaca 53
||||||||||||| ||||||||||
Sbjct: 9 tgttgacagaagatagagagcaca 32
>54396_sbi-miR156d:pmrd
Length = 125
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 33 tgacagaagaaagagagcacaaccc 57
|||||||||| ||||||||||||||
Sbjct: 21 tgacagaagagagagagcacaaccc 45
>48675_lja-miR157a:pmrd
Length = 58
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 32 ttgacagaagaaagagagcacaacc 56
||||||||||| |||||||||||||
Sbjct: 1 ttgacagaagatagagagcacaacc 25
>54772_vvi-miR156g:pmrd
Length = 103
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 30 tgttgacagaagaaagagagcaca 53
||||||||||||| ||||||||||
Sbjct: 9 tgttgacagaagatagagagcaca 32
>54570_smo-miR156b:pmrd
Length = 112
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 95 gtgctctctcttcttctgtcatca 118
||||||||| ||||||||||||||
Sbjct: 80 gtgctctctattcttctgtcatca 103
>52045_ptc-miRf10223-akr:pmrd
Length = 86
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 30 tgttgacagaagaaagagagcaca 53
||||||||||||| ||||||||||
Sbjct: 1 tgttgacagaagatagagagcaca 24
>51600_ptc-miR156j:pmrd
Length = 100
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 30 tgttgacagaagaaagagagcaca 53
||||||||||||| ||||||||||
Sbjct: 9 tgttgacagaagatagagagcaca 32
>51599_ptc-miR156i:pmrd
Length = 99
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 30 tgttgacagaagaaagagagcaca 53
||||||||||||| ||||||||||
Sbjct: 9 tgttgacagaagatagagagcaca 32
>51597_ptc-miR156g:pmrd
Length = 103
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 30 tgttgacagaagaaagagagcaca 53
||||||||||||| ||||||||||
Sbjct: 9 tgttgacagaagatagagagcaca 32
>51552_pta-miR156b:pmrd
Length = 83
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 33 tgacagaagaaagagagcacaacc 56
|||||||||| |||||||||||||
Sbjct: 3 tgacagaagatagagagcacaacc 26
>48697_mtr-miR156h:pmrd
Length = 94
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 30 tgttgacagaagaaagagagcaca 53
||||||||||||| ||||||||||
Sbjct: 4 tgttgacagaagatagagagcaca 27
>48696_mtr-miR156f:pmrd
Length = 94
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 30 tgttgacagaagaaagagagcaca 53
||||||||||||| ||||||||||
Sbjct: 4 tgttgacagaagatagagagcaca 27
>48695_mtr-miR156e:pmrd
Length = 172
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 30 tgttgacagaagaaagagagcaca 53
||||||||||||| ||||||||||
Sbjct: 4 tgttgacagaagatagagagcaca 27
>48631_gra-miR157b:pmrd
Length = 91
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 30 tgttgacagaagaaagagagcaca 53
||||||||||||| ||||||||||
Sbjct: 3 tgttgacagaagatagagagcaca 26
>48630_gra-miR157a:pmrd
Length = 101
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 30 tgttgacagaagaaagagagcaca 53
||||||||||||| ||||||||||
Sbjct: 3 tgttgacagaagatagagagcaca 26
>48531_gma-miR156d:pmrd
Length = 151
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 30 tgttgacagaagaaagagagcaca 53
||||||||||||| ||||||||||
Sbjct: 19 tgttgacagaagatagagagcaca 42
>46925_ath-miR157b:pmrd
Length = 132
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 30 tgttgacagaagaaagagagcaca 53
||||||||||||| ||||||||||
Sbjct: 17 tgttgacagaagatagagagcaca 40
>46924_ath-miR157a:pmrd
Length = 98
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 30 tgttgacagaagaaagagagcaca 53
||||||||||||| ||||||||||
Sbjct: 2 tgttgacagaagatagagagcaca 25
