miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>48648_hpr-miR1120:pmrd
          Length = 85

 Score = 77.8 bits (39), Expect = 1e-15
 Identities = 66/75 (88%)
 Strand = Plus / Minus

                                                                      
Query: 12 tactccctccgtcccaaaataagtgtctcaagtttaaacttgagacgagacacttatttt 71
          ||||||||||||||||||||||||| ||||| |||| |||  ||  ||| ||||||||||
Sbjct: 80 tactccctccgtcccaaaataagtgactcaactttatactaaagttgagtcacttatttt 21

                         
Query: 72 aggacggagggagta 86
           ||||||||||||||
Sbjct: 20 gggacggagggagta 6



 Score = 65.9 bits (33), Expect = 5e-12
 Identities = 66/77 (85%)
 Strand = Plus / Plus

                                                                      
Query: 11 ctactccctccgtcccaaaataagtgtctcaagtttaaacttgagacgagacacttattt 70
          |||||||||||||||||||||||||| ||||| ||||   |  ||  ||| |||||||||
Sbjct: 5  ctactccctccgtcccaaaataagtgactcaactttagtataaagttgagtcacttattt 64

                           
Query: 71 taggacggagggagtat 87
          | |||||||||||||||
Sbjct: 65 tgggacggagggagtat 81




>50820_osa-miRf11605-akr:pmrd
          Length = 101

 Score = 50.1 bits (25), Expect = 3e-07
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                   
Query: 11 ctactccctccgtcccaaaataagt 35
          |||||||||||||||||||||||||
Sbjct: 96 ctactccctccgtcccaaaataagt 72



 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 63 acttattttaggacggagggagta 86
          ||||||||| ||||||||||||||
Sbjct: 72 acttattttgggacggagggagta 95




>50819_osa-miRf11604-akr:pmrd
          Length = 101

 Score = 50.1 bits (25), Expect = 3e-07
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                   
Query: 11 ctactccctccgtcccaaaataagt 35
          |||||||||||||||||||||||||
Sbjct: 96 ctactccctccgtcccaaaataagt 72



 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 63 acttattttaggacggagggagta 86
          ||||||||| ||||||||||||||
Sbjct: 72 acttattttgggacggagggagta 95




>50818_osa-miRf11603-akr:pmrd
          Length = 101

 Score = 50.1 bits (25), Expect = 3e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 11 ctactccctccgtcccaaaataagt 35
          |||||||||||||||||||||||||
Sbjct: 6  ctactccctccgtcccaaaataagt 30



 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                  
Query: 63 acttattttaggacggagggagta 86
          ||||||||| ||||||||||||||
Sbjct: 30 acttattttgggacggagggagta 7




>49596_osa-miRf10381-akr:pmrd
          Length = 147

 Score = 50.1 bits (25), Expect = 3e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 12 tactccctccgtcccaaaataagtg 36
          |||||||||||||||||||||||||
Sbjct: 1  tactccctccgtcccaaaataagtg 25



 Score = 42.1 bits (21), Expect = 7e-05
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                   
Query: 62 cacttattttaggacggagggagta 86
          |||||||||| ||||||||||||||
Sbjct: 25 cacttattttgggacggagggagta 1




>50920_osa-miRf11705-akr:pmrd
          Length = 134

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 10  actactccctccgtcccaaaata 32
           |||||||||||||||||||||||
Sbjct: 124 actactccctccgtcccaaaata 102




>49958_osa-miRf10743-akr:pmrd
          Length = 122

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 10  actactccctccgtcccaaaata 32
           |||||||||||||||||||||||
Sbjct: 112 actactccctccgtcccaaaata 90



 Score = 42.1 bits (21), Expect = 7e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 12 tactccctccgtcccaaaata 32
          |||||||||||||||||||||
Sbjct: 12 tactccctccgtcccaaaata 32




>49957_osa-miRf10742-akr:pmrd
          Length = 128

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 10 actactccctccgtcccaaaata 32
          |||||||||||||||||||||||
Sbjct: 15 actactccctccgtcccaaaata 37



 Score = 42.1 bits (21), Expect = 7e-05
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 12  tactccctccgtcccaaaata 32
           |||||||||||||||||||||
Sbjct: 115 tactccctccgtcccaaaata 95




>49154_osa-miR1862c:pmrd
          Length = 89

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 13 actccctccgtcccaaaataagt 35
          |||||||||||||||||||||||
Sbjct: 1  actccctccgtcccaaaataagt 23




>49784_osa-miRf10569-akr:pmrd
          Length = 132

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 12 tactccctccgtcccaaaataa 33
          ||||||||||||||||||||||
Sbjct: 11 tactccctccgtcccaaaataa 32




>49783_osa-miRf10568-akr:pmrd
          Length = 132

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 12 tactccctccgtcccaaaataa 33
          ||||||||||||||||||||||
Sbjct: 11 tactccctccgtcccaaaataa 32




>49395_osa-miRf10180-akr:pmrd
          Length = 96

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                    
Query: 7  tatactactccctccgtcccaaaata 32
          ||||||||| ||||||||||||||||
Sbjct: 96 tatactacttcctccgtcccaaaata 71




>49394_osa-miRf10179-akr:pmrd
          Length = 105

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                    
Query: 7  tatactactccctccgtcccaaaata 32
          ||||||||| ||||||||||||||||
Sbjct: 6  tatactacttcctccgtcccaaaata 31



 Score = 42.1 bits (21), Expect = 7e-05
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 4   atatatactactccctccgtcccaa 28
           |||||||||||| ||||||||||||
Sbjct: 104 atatatactacttcctccgtcccaa 80




>49156_osa-miR1862e:pmrd
          Length = 93

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                
Query: 12 tactccctccgtcccaaaataa 33
          ||||||||||||||||||||||
Sbjct: 91 tactccctccgtcccaaaataa 70




>49155_osa-miR1862d:pmrd
          Length = 150

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 12  tactccctccgtcccaaaataa 33
           ||||||||||||||||||||||
Sbjct: 122 tactccctccgtcccaaaataa 101




>49152_osa-miR1862a:pmrd
          Length = 88

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                
Query: 12 tactccctccgtcccaaaataa 33
          ||||||||||||||||||||||
Sbjct: 87 tactccctccgtcccaaaataa 66