miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>54696_tae-miR1121:pmrd
          Length = 98

 Score = 67.9 bits (34), Expect = 1e-12
 Identities = 52/57 (91%), Gaps = 2/57 (3%)
 Strand = Plus / Minus

                                                                   
Query: 9  tactccctctgtaaagaaatataagtg--tttagatcactactttagtgatctaaac 63
          ||||||||| ||||||||||||||| |  ||||||||||||||| ||||||||||||
Sbjct: 93 tactccctccgtaaagaaatataagagcgtttagatcactacttaagtgatctaaac 37



 Score = 61.9 bits (31), Expect = 8e-11
 Identities = 58/66 (87%), Gaps = 2/66 (3%)
 Strand = Plus / Plus

                                                                      
Query: 9  tactccctctgtaaagaaatat--aagtgtttagatcactactttagtgatctaaacgct 66
          ||||||||||||||||||||||   |||||||||||||||    ||||||||||||||||
Sbjct: 9  tactccctctgtaaagaaatattagagtgtttagatcacttaagtagtgatctaaacgct 68

                
Query: 67 tttata 72
           |||||
Sbjct: 69 cttata 74




>54756_tmo-miR1120:pmrd
          Length = 85

 Score = 58.0 bits (29), Expect = 1e-09
 Identities = 50/56 (89%), Gaps = 2/56 (3%)
 Strand = Plus / Minus

                                                                  
Query: 9  tactccctctgtaaagaaatataagtg--tttagatcactactttagtgatctaaa 62
          |||||||||||||||  ||||||||    |||||||||||||||||||||||||||
Sbjct: 85 tactccctctgtaaactaatataagaccttttagatcactactttagtgatctaaa 30




>54753_tae-miR2033b:pmrd
          Length = 72

 Score = 52.0 bits (26), Expect = 8e-08
 Identities = 38/41 (92%), Gaps = 2/41 (4%)
 Strand = Plus / Minus

                                                   
Query: 9  tactccctctgtaaagaaatata--agtgtttagatcacta 47
          |||||| ||||||||||||||||  ||||||||||||||||
Sbjct: 72 tactccttctgtaaagaaatataagagtgtttagatcacta 32




>48304_ave-miR1120:pmrd
          Length = 85

 Score = 52.0 bits (26), Expect = 8e-08
 Identities = 38/41 (92%), Gaps = 2/41 (4%)
 Strand = Plus / Plus

                                                   
Query: 9  tactccctctgtaaagaaatata--agtgtttagatcacta 47
          |||||||||||||||||||||||  || |||||||||||||
Sbjct: 4  tactccctctgtaaagaaatataagagcgtttagatcacta 44



 Score = 50.1 bits (25), Expect = 3e-07
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                   
Query: 9  tactccctctgtaaagaaatataag 33
          |||||||||||||||||||||||||
Sbjct: 82 tactccctctgtaaagaaatataag 58




>54752_tae-miR2033a:pmrd
          Length = 98

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                 
Query: 8  ctactccctctgtaaagaaatat 30
          |||||||||||||||||||||||
Sbjct: 97 ctactccctctgtaaagaaatat 75




>54761_tur-miR1120:pmrd
          Length = 84

 Score = 42.1 bits (21), Expect = 7e-05
 Identities = 49/56 (87%), Gaps = 3/56 (5%)
 Strand = Plus / Minus

                                                                  
Query: 9  tactccctctgtaaagaaatataag--tgtttagatcactactttagtgatctaaa 62
          |||||||||||||||  ||||||||    ||||||||||||| |||||||||||||
Sbjct: 84 tactccctctgtaaactaatataagaccttttagatcactac-ttagtgatctaaa 30