miRNEST 2.0, an integrative microRNA resource :: BLAST
>47031_ath-miR408:pmrd
Length = 218
Score = 147 bits (74), Expect = 3e-36
Identities = 108/118 (91%), Gaps = 1/118 (0%)
Strand = Plus / Minus
Query: 28 aaagagggggccagggaagaggcagtgcatgggaagagaccaaacatagtcatttgatgt 87
|||||||| |||||||||||||||||||||||| |||||| ||||| |||| ||| ||||
Sbjct: 149 aaagagggagccagggaagaggcagtgcatgggtagagacaaaacagagtcgtttaatgt 90
Query: 88 tttggtaaaactcaatccatgctctgcttgttccctgtctctctctcgttaccacttt 145
||| ||||| ||||||||||||||||||||||||||||||||||||| ||||| ||||
Sbjct: 89 tttagtaaa-ctcaatccatgctctgcttgttccctgtctctctctcattaccgcttt 33
>48142_ath-miRf11042-akr:pmrd
Length = 99
Score = 127 bits (64), Expect = 3e-30
Identities = 92/100 (92%), Gaps = 1/100 (1%)
Strand = Plus / Plus
Query: 32 agggggccagggaagaggcagtgcatgggaagagaccaaacatagtcatttgatgttttg 91
|||| |||||||||||||||||||||||| |||||| ||||| |||| ||| |||||||
Sbjct: 1 agggagccagggaagaggcagtgcatgggtagagacaaaacagagtcgtttaatgtttta 60
Query: 92 gtaaaactcaatccatgctctgcttgttccctgtctctct 131
|| |||||||||||||||||||||||||||||||||||||
Sbjct: 61 gt-aaactcaatccatgctctgcttgttccctgtctctct 99
>54892_vvi-miR408:pmrd
Length = 107
Score = 50.1 bits (25), Expect = 5e-07
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 37 gccagggaagaggcagtgcatgggaagag 65
|||||||||||||||||||||||| ||||
Sbjct: 97 gccagggaagaggcagtgcatgggtagag 69
>51762_ptc-miR408:pmrd
Length = 105
Score = 50.1 bits (25), Expect = 5e-07
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 37 gccagggaagaggcagtgcatgggaagag 65
|||||||||||||||||||||||| ||||
Sbjct: 96 gccagggaagaggcagtgcatgggtagag 68
>48428_cpt-miR408:pmrd
Length = 100
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 37 gccagggaagaggcagtgcatggga 61
|||||||||||||||||||||||||
Sbjct: 90 gccagggaagaggcagtgcatggga 66
>46892_aqc-miR408:pmrd
Length = 87
Score = 50.1 bits (25), Expect = 5e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 37 gccagggaagaggcagtgcatgggaagag 65
||||||||||||||||||||||| |||||
Sbjct: 2 gccagggaagaggcagtgcatggaaagag 30
>53677_ptc-miRf11855-akr:pmrd
Length = 79
Score = 46.1 bits (23), Expect = 8e-06
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 39 cagggaagaggcagtgcatgggaagag 65
|||||||||||||||||||||| ||||
Sbjct: 79 cagggaagaggcagtgcatgggtagag 53
>51397_ppt-miR408b:pmrd
Length = 144
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 37 gccagggaagaggcagtgcatg 58
||||||||||||||||||||||
Sbjct: 113 gccagggaagaggcagtgcatg 92
>51347_ppe-miR408:pmrd
Length = 105
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 37 gccagggaagaggcagtgcatg 58
||||||||||||||||||||||
Sbjct: 95 gccagggaagaggcagtgcatg 74
Score = 40.1 bits (20), Expect = 5e-04
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 96 aactcaatccatgctctgcttgttccctgtct 127
||||| ||||||||||| | ||||||||||||
Sbjct: 39 aactccatccatgctctacctgttccctgtct 8
>48317_bdi-miR408:pmrd
Length = 133
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 38 ccagggaagaggcagtgcatgg 59
||||||||||||||||||||||
Sbjct: 88 ccagggaagaggcagtgcatgg 67
>55104_zma-miR408:pmrd
Length = 191
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 37 gccagggaagaggcagtgcatggga 61
|||||||||||||||||||| ||||
Sbjct: 172 gccagggaagaggcagtgcagggga 148
>54648_sof-miR408c:pmrd
Length = 286
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 37 gccagggaagaggcagtgcatggga 61
|||||||||||||||||||| ||||
Sbjct: 267 gccagggaagaggcagtgcagggga 243
>54647_sof-miR408b:pmrd
Length = 286
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 37 gccagggaagaggcagtgcatggga 61
|||||||||||||||||||| ||||
Sbjct: 267 gccagggaagaggcagtgcagggga 243
>54646_sof-miR408a:pmrd
Length = 283
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 37 gccagggaagaggcagtgcatggga 61
|||||||||||||||||||| ||||
Sbjct: 264 gccagggaagaggcagtgcagggga 240
>54585_smo-miR408:pmrd
Length = 109
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 37 gccagggaagaggcagtgcat 57
|||||||||||||||||||||
Sbjct: 96 gccagggaagaggcagtgcat 76
>54499_sbi-miR408:pmrd
Length = 205
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 37 gccagggaagaggcagtgcatggga 61
|||||||||||||||||||| ||||
Sbjct: 204 gccagggaagaggcagtgcagggga 180
>54389_rco-miR408:pmrd
Length = 129
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 37 gccagggaagaggcagtgcatgggaagag 65
|||||||||||||||||||| ||| ||||
Sbjct: 110 gccagggaagaggcagtgcaggggtagag 82
>51566_pta-miR408:pmrd
Length = 86
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 37 gccagggaagaggcagtgcat 57
|||||||||||||||||||||
Sbjct: 84 gccagggaagaggcagtgcat 64
>48975_osa-miR408:pmrd
Length = 213
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 37 gccagggaagaggcagtgcatggga 61
|||||||||||||||||||| ||||
Sbjct: 173 gccagggaagaggcagtgcagggga 149
>54690_tae-miR408:pmrd
Length = 187
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 37 gccagggaagaggcagtgca 56
||||||||||||||||||||
Sbjct: 156 gccagggaagaggcagtgca 137
>54649_sof-miR408d:pmrd
Length = 215
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 37 gccagggaagaggcagtgca 56
||||||||||||||||||||
Sbjct: 196 gccagggaagaggcagtgca 177
