miRNEST 2.0, an integrative microRNA resource :: BLAST
>47339_ath-miRf10239-akr:pmrd
Length = 129
Score = 71.9 bits (36), Expect = 1e-13
Identities = 48/52 (92%)
Strand = Plus / Plus
Query: 90 ttattggtttgtaagtagggattggctcccgccttacatcaactgaatcgga 141
|||||||||||| || ||||||||| ||||||||| ||||||||||||||||
Sbjct: 71 ttattggtttgtgagcagggattggatcccgccttgcatcaactgaatcgga 122
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 22 tcgggctcggattcgcttgatgcaggtcgg 51
||||||||||||||||||| ||||||||||
Sbjct: 1 tcgggctcggattcgcttggtgcaggtcgg 30
>46957_ath-miR168a:pmrd
Length = 138
Score = 71.9 bits (36), Expect = 1e-13
Identities = 48/52 (92%)
Strand = Plus / Plus
Query: 90 ttattggtttgtaagtagggattggctcccgccttacatcaactgaatcgga 141
|||||||||||| || ||||||||| ||||||||| ||||||||||||||||
Sbjct: 76 ttattggtttgtgagcagggattggatcccgccttgcatcaactgaatcgga 127
Score = 54.0 bits (27), Expect = 3e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 21 atcgggctcggattcgcttgatgcaggtcgg 51
|||||||||||||||||||| ||||||||||
Sbjct: 5 atcgggctcggattcgcttggtgcaggtcgg 35
>46958_ath-miR168b:pmrd
Length = 124
Score = 61.9 bits (31), Expect = 1e-10
Identities = 41/43 (95%), Gaps = 1/43 (2%)
Strand = Plus / Plus
Query: 27 ctcggattcgcttgatgcaggtc-ggaactgattggctgacac 68
|||||||||||||| |||||||| |||||||||||||||||||
Sbjct: 12 ctcggattcgcttggtgcaggtcgggaactgattggctgacac 54
>46959_ath-miR168m:pmrd
Length = 104
Score = 60.0 bits (30), Expect = 6e-10
Identities = 42/46 (91%)
Strand = Plus / Plus
Query: 90 ttattggtttgtaagtagggattggctcccgccttacatcaactga 135
|||||||||||| || ||||||||| ||||||||| ||||||||||
Sbjct: 59 ttattggtttgtgagcagggattggatcccgccttgcatcaactga 104
>51651_ptc-miR168b:pmrd
Length = 136
Score = 50.1 bits (25), Expect = 5e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 110 attggctcccgccttacatcaactgaatcggag 142
||||| ||||||||| |||||||||||||||||
Sbjct: 103 attggatcccgccttgcatcaactgaatcggag 135
>51650_ptc-miR168a:pmrd
Length = 160
Score = 50.1 bits (25), Expect = 5e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 110 attggctcccgccttacatcaactgaatcggag 142
||||| ||||||||| |||||||||||||||||
Sbjct: 127 attggatcccgccttgcatcaactgaatcggag 159
>48560_gma-miR168:pmrd
Length = 125
Score = 50.1 bits (25), Expect = 5e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 110 attggctcccgccttacatcaactgaatcggag 142
||||| ||||||||| |||||||||||||||||
Sbjct: 81 attggatcccgccttgcatcaactgaatcggag 113
>48349_bna-miR168:pmrd
Length = 133
Score = 48.1 bits (24), Expect = 2e-06
Identities = 34/36 (94%), Gaps = 1/36 (2%)
Strand = Plus / Plus
Query: 34 tcgcttgatgcaggtcgg-aactgattggctgacac 68
||||||| |||||||||| |||||||||||||||||
Sbjct: 18 tcgcttggtgcaggtcgggaactgattggctgacac 53
>54802_vvi-miR168:pmrd
Length = 132
Score = 46.1 bits (23), Expect = 8e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 116 tcccgccttacatcaactgaatcggag 142
||||||||| |||||||||||||||||
Sbjct: 101 tcccgccttgcatcaactgaatcggag 127
>54388_rco-miR168:pmrd
Length = 156
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 110 attggctcccgccttacatcaactgaatcg 139
||||| ||||||||| ||||||||||||||
Sbjct: 112 attggatcccgccttgcatcaactgaatcg 141
Score = 42.1 bits (21), Expect = 1e-04
Identities = 31/33 (93%), Gaps = 1/33 (3%)
Strand = Plus / Plus
Query: 32 attcgcttgatgcaggtcgg-aactgattggct 63
||||||||| |||||||||| ||||||||||||
Sbjct: 17 attcgcttggtgcaggtcgggaactgattggct 49
>55000_zma-miR168b:pmrd
Length = 104
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 116 tcccgccttacatcaactgaatcggagcc 144
||||||||| |||||| ||||||||||||
Sbjct: 66 tcccgccttgcatcaagtgaatcggagcc 94
