miRNEST 2.0, an integrative microRNA resource :: BLAST
>47031_ath-miR408:pmrd
Length = 218
Score = 133 bits (67), Expect = 3e-32
Identities = 100/110 (90%), Gaps = 2/110 (1%)
Strand = Plus / Minus
Query: 12 agggagccagggaagaggcagtgcatgggaagagaccaaacatagtcatttgatgttttg 71
||||||||||||||||||||||||||||| |||||| ||||| |||| ||| |||||||
Sbjct: 145 agggagccagggaagaggcagtgcatgggtagagacaaaacagagtcgtttaatgtttta 86
Query: 72 gtaaaaactcgatccatgctctgcttgttccctgtctctctctcgttacc 121
|| |||||| ||||||||||||||||||||||||||||||||| |||||
Sbjct: 85 gt--aaactcaatccatgctctgcttgttccctgtctctctctcattacc 38
>48142_ath-miRf11042-akr:pmrd
Length = 99
Score = 123 bits (62), Expect = 3e-29
Identities = 92/101 (91%), Gaps = 2/101 (1%)
Strand = Plus / Plus
Query: 12 agggagccagggaagaggcagtgcatgggaagagaccaaacatagtcatttgatgttttg 71
||||||||||||||||||||||||||||| |||||| ||||| |||| ||| |||||||
Sbjct: 1 agggagccagggaagaggcagtgcatgggtagagacaaaacagagtcgtttaatgtttta 60
Query: 72 gtaaaaactcgatccatgctctgcttgttccctgtctctct 112
|| |||||| ||||||||||||||||||||||||||||||
Sbjct: 61 gt--aaactcaatccatgctctgcttgttccctgtctctct 99
>54892_vvi-miR408:pmrd
Length = 107
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 15 gagccagggaagaggcagtgcatgggaagag 45
|||||||||||||||||||||||||| ||||
Sbjct: 99 gagccagggaagaggcagtgcatgggtagag 69
>48428_cpt-miR408:pmrd
Length = 100
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 15 gagccagggaagaggcagtgcatggga 41
|||||||||||||||||||||||||||
Sbjct: 92 gagccagggaagaggcagtgcatggga 66
>51762_ptc-miR408:pmrd
Length = 105
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 16 agccagggaagaggcagtgcatgggaagag 45
||||||||||||||||||||||||| ||||
Sbjct: 97 agccagggaagaggcagtgcatgggtagag 68
>46892_aqc-miR408:pmrd
Length = 87
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 16 agccagggaagaggcagtgcatgggaagag 45
|||||||||||||||||||||||| |||||
Sbjct: 1 agccagggaagaggcagtgcatggaaagag 30
>54648_sof-miR408c:pmrd
Length = 286
Score = 50.1 bits (25), Expect = 4e-07
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 13 gggagccagggaagaggcagtgcatggga 41
|||||||||||||||||||||||| ||||
Sbjct: 271 gggagccagggaagaggcagtgcagggga 243
>54647_sof-miR408b:pmrd
Length = 286
Score = 50.1 bits (25), Expect = 4e-07
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 13 gggagccagggaagaggcagtgcatggga 41
|||||||||||||||||||||||| ||||
Sbjct: 271 gggagccagggaagaggcagtgcagggga 243
>54646_sof-miR408a:pmrd
Length = 283
Score = 50.1 bits (25), Expect = 4e-07
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 13 gggagccagggaagaggcagtgcatggga 41
|||||||||||||||||||||||| ||||
Sbjct: 268 gggagccagggaagaggcagtgcagggga 240
>48975_osa-miR408:pmrd
Length = 213
Score = 50.1 bits (25), Expect = 4e-07
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 13 gggagccagggaagaggcagtgcatggga 41
|||||||||||||||||||||||| ||||
Sbjct: 177 gggagccagggaagaggcagtgcagggga 149
>55104_zma-miR408:pmrd
Length = 191
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 14 ggagccagggaagaggcagtgcatggga 41
||||||||||||||||||||||| ||||
Sbjct: 175 ggagccagggaagaggcagtgcagggga 148
>54690_tae-miR408:pmrd
Length = 187
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 13 gggagccagggaagaggcagtgca 36
||||||||||||||||||||||||
Sbjct: 160 gggagccagggaagaggcagtgca 137
>54649_sof-miR408d:pmrd
Length = 215
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 13 gggagccagggaagaggcagtgca 36
||||||||||||||||||||||||
Sbjct: 200 gggagccagggaagaggcagtgca 177
>53677_ptc-miRf11855-akr:pmrd
Length = 79
Score = 46.1 bits (23), Expect = 6e-06
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 19 cagggaagaggcagtgcatgggaagag 45
|||||||||||||||||||||| ||||
Sbjct: 79 cagggaagaggcagtgcatgggtagag 53
>51566_pta-miR408:pmrd
Length = 86
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 15 gagccagggaagaggcagtgcat 37
|||||||||||||||||||||||
Sbjct: 86 gagccagggaagaggcagtgcat 64
>51397_ppt-miR408b:pmrd
Length = 144
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 16 agccagggaagaggcagtgcatg 38
|||||||||||||||||||||||
Sbjct: 114 agccagggaagaggcagtgcatg 92
>51347_ppe-miR408:pmrd
Length = 105
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 16 agccagggaagaggcagtgcatg 38
|||||||||||||||||||||||
Sbjct: 96 agccagggaagaggcagtgcatg 74
Score = 40.1 bits (20), Expect = 4e-04
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 77 aactcgatccatgctctgcttgttccctgtct 108
||||| ||||||||||| | ||||||||||||
Sbjct: 39 aactccatccatgctctacctgttccctgtct 8
>54585_smo-miR408:pmrd
Length = 109
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 16 agccagggaagaggcagtgcat 37
||||||||||||||||||||||
Sbjct: 97 agccagggaagaggcagtgcat 76
>54499_sbi-miR408:pmrd
Length = 205
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 16 agccagggaagaggcagtgcatggga 41
||||||||||||||||||||| ||||
Sbjct: 205 agccagggaagaggcagtgcagggga 180
>54389_rco-miR408:pmrd
Length = 129
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 16 agccagggaagaggcagtgcatgggaagag 45
||||||||||||||||||||| ||| ||||
Sbjct: 111 agccagggaagaggcagtgcaggggtagag 82
>48317_bdi-miR408:pmrd
Length = 133
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 18 ccagggaagaggcagtgcatgg 39
||||||||||||||||||||||
Sbjct: 88 ccagggaagaggcagtgcatgg 67
>54650_sof-miR408e:pmrd
Length = 283
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 13 gggagccagggaagaggcagtgca 36
|||||||||||||||| |||||||
Sbjct: 268 gggagccagggaagagtcagtgca 245
