miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>48423_cpa-miR162a:pmrd
          Length = 109

 Score = 75.8 bits (38), Expect = 7e-15
 Identities = 38/38 (100%)
 Strand = Plus / Plus

                                                
Query: 4  aaagtcactggaggcagcggttcatcgatctcttcctg 41
          ||||||||||||||||||||||||||||||||||||||
Sbjct: 6  aaagtcactggaggcagcggttcatcgatctcttcctg 43



 Score = 50.1 bits (25), Expect = 4e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 98  gatcgataaacctctgcatccagcg 122
           |||||||||||||||||||||||||
Sbjct: 78  gatcgataaacctctgcatccagcg 102




>48493_ghr-miR162a:pmrd
          Length = 148

 Score = 67.9 bits (34), Expect = 2e-12
 Identities = 37/38 (97%)
 Strand = Plus / Plus

                                                
Query: 4  aaagtcactggaggcagcggttcatcgatctcttcctg 41
          |||| |||||||||||||||||||||||||||||||||
Sbjct: 17 aaagacactggaggcagcggttcatcgatctcttcctg 54



 Score = 50.1 bits (25), Expect = 4e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 98  gatcgataaacctctgcatccagcg 122
           |||||||||||||||||||||||||
Sbjct: 92  gatcgataaacctctgcatccagcg 116




>46937_ath-miR162a:pmrd
          Length = 140

 Score = 67.9 bits (34), Expect = 2e-12
 Identities = 37/38 (97%)
 Strand = Plus / Plus

                                                
Query: 6  agtcactggaggcagcggttcatcgatctcttcctgtg 43
          |||| |||||||||||||||||||||||||||||||||
Sbjct: 20 agtcgctggaggcagcggttcatcgatctcttcctgtg 57



 Score = 67.9 bits (34), Expect = 2e-12
 Identities = 43/46 (93%)
 Strand = Plus / Plus

                                                         
Query: 84  taaaagcacgaacagatcgataaacctctgcatccagcggttgcct 129
           |||||||| ||| |||||||||||||||||||||||||| ||||||
Sbjct: 73  taaaagcatgaatagatcgataaacctctgcatccagcgtttgcct 118




>54784_vvi-miR162:pmrd
          Length = 103

 Score = 65.9 bits (33), Expect = 7e-12
 Identities = 36/37 (97%)
 Strand = Plus / Plus

                                               
Query: 5  aagtcactggaggcagcggttcatcgatctcttcctg 41
          ||||||||||| |||||||||||||||||||||||||
Sbjct: 3  aagtcactggatgcagcggttcatcgatctcttcctg 39



 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 100 tcgataaacctctgcatccagcg 122
           |||||||||||||||||||||||
Sbjct: 73  tcgataaacctctgcatccagcg 95




>54387_rco-miR162:pmrd
          Length = 96

 Score = 65.9 bits (33), Expect = 7e-12
 Identities = 33/33 (100%)
 Strand = Plus / Plus

                                           
Query: 9  cactggaggcagcggttcatcgatctcttcctg 41
          |||||||||||||||||||||||||||||||||
Sbjct: 1  cactggaggcagcggttcatcgatctcttcctg 33



 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 98  gatcgataaacctctgcatccagc 121
           ||||||||||||||||||||||||
Sbjct: 73  gatcgataaacctctgcatccagc 96




>52400_ptc-miRf10578-akr:pmrd
          Length = 103

 Score = 65.9 bits (33), Expect = 7e-12
 Identities = 33/33 (100%)
 Strand = Plus / Minus

                                           
Query: 9  cactggaggcagcggttcatcgatctcttcctg 41
          |||||||||||||||||||||||||||||||||
Sbjct: 97 cactggaggcagcggttcatcgatctcttcctg 65



 Score = 52.0 bits (26), Expect = 1e-07
 Identities = 29/30 (96%)
 Strand = Plus / Minus

                                         
Query: 93  gaacagatcgataaacctctgcatccagcg 122
           |||| |||||||||||||||||||||||||
Sbjct: 35  gaaccgatcgataaacctctgcatccagcg 6




>52399_ptc-miRf10577-akr:pmrd
          Length = 103

 Score = 65.9 bits (33), Expect = 7e-12
 Identities = 33/33 (100%)
 Strand = Plus / Minus

                                           
Query: 9  cactggaggcagcggttcatcgatctcttcctg 41
          |||||||||||||||||||||||||||||||||
Sbjct: 97 cactggaggcagcggttcatcgatctcttcctg 65



 Score = 52.0 bits (26), Expect = 1e-07
 Identities = 29/30 (96%)
 Strand = Plus / Minus

                                         
Query: 93  gaacagatcgataaacctctgcatccagcg 122
           |||| |||||||||||||||||||||||||
Sbjct: 35  gaaccgatcgataaacctctgcatccagcg 6




>51616_ptc-miR162a:pmrd
          Length = 107

 Score = 65.9 bits (33), Expect = 7e-12
 Identities = 33/33 (100%)
 Strand = Plus / Plus

                                           
Query: 9  cactggaggcagcggttcatcgatctcttcctg 41
          |||||||||||||||||||||||||||||||||
Sbjct: 9  cactggaggcagcggttcatcgatctcttcctg 41



 Score = 52.0 bits (26), Expect = 1e-07
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                         
Query: 93  gaacagatcgataaacctctgcatccagcg 122
           |||| |||||||||||||||||||||||||
Sbjct: 71  gaaccgatcgataaacctctgcatccagcg 100




>48545_gma-miR162a:pmrd
          Length = 102

 Score = 65.9 bits (33), Expect = 7e-12
 Identities = 36/37 (97%)
 Strand = Plus / Plus

                                               
Query: 5  aagtcactggaggcagcggttcatcgatctcttcctg 41
          ||||||||||| |||||||||||||||||||||||||
Sbjct: 4  aagtcactggatgcagcggttcatcgatctcttcctg 40



 Score = 50.1 bits (25), Expect = 4e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 98  gatcgataaacctctgcatccagcg 122
           |||||||||||||||||||||||||
Sbjct: 71  gatcgataaacctctgcatccagcg 95




>52498_ptc-miRf10676-akr:pmrd
          Length = 101

 Score = 58.0 bits (29), Expect = 2e-09
 Identities = 32/33 (96%)
 Strand = Plus / Minus

                                           
Query: 9  cactggaggcagcggttcatcgatctcttcctg 41
          |||||||||||||||||||||||||| ||||||
Sbjct: 96 cactggaggcagcggttcatcgatcttttcctg 64



 Score = 54.0 bits (27), Expect = 3e-08
 Identities = 30/31 (96%)
 Strand = Plus / Minus

                                          
Query: 90  cacgaacagatcgataaacctctgcatccag 120
           ||||||| |||||||||||||||||||||||
Sbjct: 37  cacgaaccgatcgataaacctctgcatccag 7




>52497_ptc-miRf10675-akr:pmrd
          Length = 105

 Score = 58.0 bits (29), Expect = 2e-09
 Identities = 32/33 (96%)
 Strand = Plus / Minus

                                           
Query: 9  cactggaggcagcggttcatcgatctcttcctg 41
          |||||||||||||||||||||||||| ||||||
Sbjct: 98 cactggaggcagcggttcatcgatcttttcctg 66



 Score = 54.0 bits (27), Expect = 3e-08
 Identities = 30/31 (96%)
 Strand = Plus / Minus

                                          
Query: 90  cacgaacagatcgataaacctctgcatccag 120
           ||||||| |||||||||||||||||||||||
Sbjct: 39  cacgaaccgatcgataaacctctgcatccag 9




>52244_ptc-miRf10422-akr:pmrd
          Length = 105

 Score = 58.0 bits (29), Expect = 2e-09
 Identities = 32/33 (96%)
 Strand = Plus / Minus

                                           
Query: 9  cactggaggcagcggttcatcgatctcttcctg 41
          |||||||||||||||||||||||||| ||||||
Sbjct: 98 cactggaggcagcggttcatcgatcttttcctg 66



 Score = 54.0 bits (27), Expect = 3e-08
 Identities = 30/31 (96%)
 Strand = Plus / Minus

                                          
Query: 90  cacgaacagatcgataaacctctgcatccag 120
           ||||||| |||||||||||||||||||||||
Sbjct: 39  cacgaaccgatcgataaacctctgcatccag 9




>52243_ptc-miRf10421-akr:pmrd
          Length = 101

 Score = 58.0 bits (29), Expect = 2e-09
 Identities = 32/33 (96%)
 Strand = Plus / Minus

                                           
Query: 9  cactggaggcagcggttcatcgatctcttcctg 41
          |||||||||||||||||||||||||| ||||||
Sbjct: 96 cactggaggcagcggttcatcgatcttttcctg 64



 Score = 54.0 bits (27), Expect = 3e-08
 Identities = 30/31 (96%)
 Strand = Plus / Minus

                                          
Query: 90  cacgaacagatcgataaacctctgcatccag 120
           ||||||| |||||||||||||||||||||||
Sbjct: 37  cacgaaccgatcgataaacctctgcatccag 7




>51618_ptc-miR162c:pmrd
          Length = 107

 Score = 58.0 bits (29), Expect = 2e-09
 Identities = 32/33 (96%)
 Strand = Plus / Plus

                                           
Query: 9  cactggaggcagcggttcatcgatctcttcctg 41
          |||||||||||||||||||||||||| ||||||
Sbjct: 9  cactggaggcagcggttcatcgatcttttcctg 41



 Score = 54.0 bits (27), Expect = 3e-08
 Identities = 30/31 (96%)
 Strand = Plus / Plus

                                          
Query: 90  cacgaacagatcgataaacctctgcatccag 120
           ||||||| |||||||||||||||||||||||
Sbjct: 68  cacgaaccgatcgataaacctctgcatccag 98




>51617_ptc-miR162b:pmrd
          Length = 107

 Score = 58.0 bits (29), Expect = 2e-09
 Identities = 32/33 (96%)
 Strand = Plus / Plus

                                           
Query: 9  cactggaggcagcggttcatcgatctcttcctg 41
          |||||||||||||||||||||||||| ||||||
Sbjct: 9  cactggaggcagcggttcatcgatcttttcctg 41



 Score = 54.0 bits (27), Expect = 3e-08
 Identities = 30/31 (96%)
 Strand = Plus / Plus

                                          
Query: 90  cacgaacagatcgataaacctctgcatccag 120
           ||||||| |||||||||||||||||||||||
Sbjct: 68  cacgaaccgatcgataaacctctgcatccag 98




>47354_ath-miRf10254-akr:pmrd
          Length = 115

 Score = 54.0 bits (27), Expect = 3e-08
 Identities = 36/39 (92%)
 Strand = Plus / Minus

                                                  
Query: 5   aagtcactggaggcagcggttcatcgatctcttcctgtg 43
           ||||| |||||||||||||||||||||||  ||||||||
Sbjct: 108 aagtcgctggaggcagcggttcatcgatcaattcctgtg 70



 Score = 52.0 bits (26), Expect = 1e-07
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                 
Query: 85  aaaagcacgaacagatcgataaacctctgcatccagcg 122
           ||||||| |||  |||||||||||||||||||||||||
Sbjct: 50  aaaagcaagaatcgatcgataaacctctgcatccagcg 13




>46938_ath-miR162b:pmrd
          Length = 111

 Score = 54.0 bits (27), Expect = 3e-08
 Identities = 36/39 (92%)
 Strand = Plus / Plus

                                                 
Query: 5  aagtcactggaggcagcggttcatcgatctcttcctgtg 43
          ||||| |||||||||||||||||||||||  ||||||||
Sbjct: 6  aagtcgctggaggcagcggttcatcgatcaattcctgtg 44



 Score = 52.0 bits (26), Expect = 1e-07
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                 
Query: 85  aaaagcacgaacagatcgataaacctctgcatccagcg 122
           ||||||| |||  |||||||||||||||||||||||||
Sbjct: 64  aaaagcaagaatcgatcgataaacctctgcatccagcg 101




>48834_osa-miR162a:pmrd
          Length = 171

 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 98  gatcgataaacctctgcatccag 120
           |||||||||||||||||||||||
Sbjct: 141 gatcgataaacctctgcatccag 163




>48707_mtr-miR162d:pmrd
          Length = 87

 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                         
Query: 11 ctggaggcagcggttcatcgatctcttcctg 41
          ||||| |||||||||||||||||| ||||||
Sbjct: 1  ctggatgcagcggttcatcgatctgttcctg 31



 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 100 tcgataaacctctgcatccag 120
           |||||||||||||||||||||
Sbjct: 67  tcgataaacctctgcatccag 87



 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 93  gaacagatcgataaacctctgcatccag 120
           |||||||||||| |||| ||||||||||
Sbjct: 28  gaacagatcgatgaaccgctgcatccag 1




>48706_mtr-miR162c:pmrd
          Length = 86

 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                         
Query: 11 ctggaggcagcggttcatcgatctcttcctg 41
          ||||| |||||||||||||||||| ||||||
Sbjct: 86 ctggatgcagcggttcatcgatctgttcctg 56



 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 100 tcgataaacctctgcatcca 119
           ||||||||||||||||||||
Sbjct: 20  tcgataaacctctgcatcca 1



 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 93  gaacagatcgataaacctctgcatccag 120
           |||||||||||| |||| ||||||||||
Sbjct: 59  gaacagatcgatgaaccgctgcatccag 86




>48685_lsa-miR162:pmrd
          Length = 89

 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 100 tcgataaacctctgcatccagcg 122
           |||||||||||||||||||||||
Sbjct: 1   tcgataaacctctgcatccagcg 23




>48682_llu-miR162:pmrd
          Length = 80

 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                         
Query: 11 ctggaggcagcggttcatcgatctcttcctg 41
          ||||| ||||||||| |||||||||||||||
Sbjct: 1  ctggaagcagcggtttatcgatctcttcctg 31



 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 98  gatcgataaacctctgcatccag 120
           |||||||||||||||||||||||
Sbjct: 58  gatcgataaacctctgcatccag 80




>48546_gma-miR162m:pmrd
          Length = 367

 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 100 tcgataaacctctgcatccagcg 122
           |||||||||||||||||||||||
Sbjct: 1   tcgataaacctctgcatccagcg 23




>48705_mtr-miR162b:pmrd
          Length = 85

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                        
Query: 12 tggaggcagcggttcatcgatctcttcctg 41
          |||| |||||||||||||||||| ||||||
Sbjct: 1  tggatgcagcggttcatcgatctgttcctg 30



 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 100 tcgataaacctctgcatcca 119
           ||||||||||||||||||||
Sbjct: 66  tcgataaacctctgcatcca 85




>54948_zma-miR162b:pmrd
          Length = 130

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 100 tcgataaacctctgcatccag 120
           |||||||||||||||||||||
Sbjct: 110 tcgataaacctctgcatccag 130




>54542_sly-miR162:pmrd
          Length = 99

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 100 tcgataaacctctgcatccag 120
           |||||||||||||||||||||
Sbjct: 79  tcgataaacctctgcatccag 99




>48690_mdo-miR162:pmrd
          Length = 88

 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 11 ctggaggcagcggttcatcgatct 34
          ||||||||| ||||||||||||||
Sbjct: 1  ctggaggcatcggttcatcgatct 24