miRNEST 2.0, an integrative microRNA resource :: BLAST
>48377_bna-miR399:pmrd
Length = 102
Score = 165 bits (83), Expect = 8e-42
Identities = 92/95 (96%)
Strand = Plus / Plus
Query: 3 aagatctctattggcaggaaaccattacttagatctttgcatctctctgtgcattgattt 62
||||||||||||||||| |||||||||||||||||||||||||||| | |||||||||||
Sbjct: 8 aagatctctattggcagaaaaccattacttagatctttgcatctctttctgcattgattt 67
Query: 63 gtagtgagttctctgccaaaggagatttgcccggt 97
|||||||||||||||||||||||||||||||||||
Sbjct: 68 gtagtgagttctctgccaaaggagatttgcccggt 102
>47015_ath-miR399a:pmrd
Length = 123
Score = 129 bits (65), Expect = 4e-31
Identities = 94/103 (91%), Gaps = 3/103 (2%)
Strand = Plus / Plus
Query: 3 aagatctctattggcaggaaaccattacttagatctttgcatctctctgtgcattgattt 62
|||||||||||||||||||||||||||||||||||||||||||||| | ||||||| |||
Sbjct: 17 aagatctctattggcaggaaaccattacttagatctttgcatctctttatgcattgcttt 76
Query: 63 ---gtagtgagttctctgccaaaggagatttgcccggtaattc 102
||||||||| ||||||||||||||||||||| |||||||
Sbjct: 77 taattagtgagttatctgccaaaggagatttgccctgtaattc 119
>47020_ath-miR399f:pmrd
Length = 118
Score = 69.9 bits (35), Expect = 3e-13
Identities = 41/43 (95%)
Strand = Plus / Plus
Query: 60 tttgtagtgagttctctgccaaaggagatttgcccggtaattc 102
||||| ||||| |||||||||||||||||||||||||||||||
Sbjct: 72 tttgtggtgagctctctgccaaaggagatttgcccggtaattc 114
>54881_vvi-miR399e:pmrd
Length = 112
Score = 52.0 bits (26), Expect = 8e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 73 ctctgccaaaggagatttgcccggtaattc 102
|||||||||||||||||||||||| |||||
Sbjct: 79 ctctgccaaaggagatttgcccggcaattc 108
>47535_ath-miRf10435-akr:pmrd
Length = 92
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 71 ttctctgccaaaggagatttgccc 94
||||||||||||||||||||||||
Sbjct: 61 ttctctgccaaaggagatttgccc 84
>47018_ath-miR399d:pmrd
Length = 100
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 71 ttctctgccaaaggagatttgccc 94
||||||||||||||||||||||||
Sbjct: 65 ttctctgccaaaggagatttgccc 88
>51749_ptc-miR399c:pmrd
Length = 126
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 76 tgccaaaggagatttgcccggtaattc 102
||||||||||||||||||||| |||||
Sbjct: 97 tgccaaaggagatttgcccggcaattc 123
>51748_ptc-miR399b:pmrd
Length = 126
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 76 tgccaaaggagatttgcccggtaattc 102
||||||||||||||||||||| |||||
Sbjct: 97 tgccaaaggagatttgcccggcaattc 123
>48969_osa-miR399f:pmrd
Length = 117
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 72 tctctgccaaaggagatttgccc 94
|||||||||||||||||||||||
Sbjct: 83 tctctgccaaaggagatttgccc 105
>54494_sbi-miR399f:pmrd
Length = 120
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 73 ctctgccaaaggagatttgccc 94
||||||||||||||||||||||
Sbjct: 78 ctctgccaaaggagatttgccc 99
>52630_ptc-miRf10808-akr:pmrd
Length = 110
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 76 tgccaaaggagatttgcccgg 96
|||||||||||||||||||||
Sbjct: 25 tgccaaaggagatttgcccgg 5
>51890_ptc-miRf10068-akr:pmrd
Length = 110
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 76 tgccaaaggagatttgcccgg 96
|||||||||||||||||||||
Sbjct: 25 tgccaaaggagatttgcccgg 5
>48970_osa-miR399g:pmrd
Length = 119
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 74 tctgccaaaggagatttgccc 94
|||||||||||||||||||||
Sbjct: 87 tctgccaaaggagatttgccc 107
>48754_mtr-miR399e:pmrd
Length = 134
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 74 tctgccaaaggagatttgccc 94
|||||||||||||||||||||
Sbjct: 93 tctgccaaaggagatttgccc 113
>48750_mtr-miR399a:pmrd
Length = 134
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 74 tctgccaaaggagatttgccc 94
|||||||||||||||||||||
Sbjct: 93 tctgccaaaggagatttgccc 113
>47019_ath-miR399e:pmrd
Length = 109
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 73 ctctgccaaaggagatttgcc 93
|||||||||||||||||||||
Sbjct: 76 ctctgccaaaggagatttgcc 96
>54883_vvi-miR399g:pmrd
Length = 113
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 75 ctgccaaaggagatttgccc 94
||||||||||||||||||||
Sbjct: 82 ctgccaaaggagatttgccc 101
>54493_sbi-miR399e:pmrd
Length = 126
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 75 ctgccaaaggagatttgccc 94
||||||||||||||||||||
Sbjct: 86 ctgccaaaggagatttgccc 105
>51756_ptc-miR399j:pmrd
Length = 112
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 73 ctctgccaaaggagatttgcccgg 96
||||||||||||||||||| ||||
Sbjct: 79 ctctgccaaaggagatttgtccgg 102
>51747_ptc-miR399a:pmrd
Length = 120
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 75 ctgccaaaggagatttgccc 94
||||||||||||||||||||
Sbjct: 90 ctgccaaaggagatttgccc 109
>49373_osa-miRf10158-akr:pmrd
Length = 112
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 75 ctgccaaaggagatttgccc 94
||||||||||||||||||||
Sbjct: 84 ctgccaaaggagatttgccc 103
>48968_osa-miR399e:pmrd
Length = 118
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 75 ctgccaaaggagatttgccc 94
||||||||||||||||||||
Sbjct: 87 ctgccaaaggagatttgccc 106
