miRNEST 2.0, an integrative microRNA resource :: BLAST
>48397_bra-miR160a:pmrd
Length = 127
Score = 123 bits (62), Expect = 3e-29
Identities = 92/102 (90%)
Strand = Plus / Plus
Query: 27 tatgcctggctccctgtatgccatacactaagctcatcgaccatcgaggacttacgtgga 86
|||||||||||||||||||||||| | ||||||||||||||||| || ||| | |||| |
Sbjct: 24 tatgcctggctccctgtatgccatcctctaagctcatcgaccattgatgacctccgtgaa 83
Query: 87 tggcgtatgaggagccaagcatattttcatatgcatatacat 128
||||||||||||||||| |||||||||||||| ||| |||||
Sbjct: 84 tggcgtatgaggagccatgcatattttcatatacatttacat 125
>48396_bra-miR160a:pmrd
Length = 127
Score = 123 bits (62), Expect = 3e-29
Identities = 92/102 (90%)
Strand = Plus / Plus
Query: 27 tatgcctggctccctgtatgccatacactaagctcatcgaccatcgaggacttacgtgga 86
|||||||||||||||||||||||| | ||||||||||||||||| || ||| | |||| |
Sbjct: 24 tatgcctggctccctgtatgccatcctctaagctcatcgaccattgatgacctccgtgaa 83
Query: 87 tggcgtatgaggagccaagcatattttcatatgcatatacat 128
||||||||||||||||| |||||||||||||| ||| |||||
Sbjct: 84 tggcgtatgaggagccatgcatattttcatatacatttacat 125
>47213_ath-miRf10113-akr:pmrd
Length = 85
Score = 87.7 bits (44), Expect = 2e-18
Identities = 74/84 (88%)
Strand = Plus / Plus
Query: 27 tatgcctggctccctgtatgccatacactaagctcatcgaccatcgaggacttacgtgga 86
||||||||||||||||||||||||| || ||| |||||| ||||| ||| | ||||||
Sbjct: 2 tatgcctggctccctgtatgccatatgctgagcccatcgagtatcgatgacctccgtgga 61
Query: 87 tggcgtatgaggagccaagcatat 110
||||||||||||||||| ||||||
Sbjct: 62 tggcgtatgaggagccatgcatat 85
>46934_ath-miR160a:pmrd
Length = 85
Score = 87.7 bits (44), Expect = 2e-18
Identities = 74/84 (88%)
Strand = Plus / Plus
Query: 27 tatgcctggctccctgtatgccatacactaagctcatcgaccatcgaggacttacgtgga 86
||||||||||||||||||||||||| || ||| |||||| ||||| ||| | ||||||
Sbjct: 2 tatgcctggctccctgtatgccatatgctgagcccatcgagtatcgatgacctccgtgga 61
Query: 87 tggcgtatgaggagccaagcatat 110
||||||||||||||||| ||||||
Sbjct: 62 tggcgtatgaggagccatgcatat 85
>48704_mtr-miR160e:pmrd
Length = 91
Score = 63.9 bits (32), Expect = 3e-11
Identities = 72/84 (85%), Gaps = 1/84 (1%)
Strand = Plus / Plus
Query: 29 tgcctggctccctgtatgccatacactaagctcatcgacca-tcgaggacttacgtggat 87
||||||||||||||||||||||| | |||||||| || | || | ||| | ||||||
Sbjct: 6 tgcctggctccctgtatgccatatatgaagctcattgaaaaatcaatgacctttgtggat 65
Query: 88 ggcgtatgaggagccaagcatatt 111
||||||||||||||||||||||||
Sbjct: 66 ggcgtatgaggagccaagcatatt 89
>48702_mtr-miR160b:pmrd
Length = 91
Score = 63.9 bits (32), Expect = 3e-11
Identities = 72/84 (85%), Gaps = 1/84 (1%)
Strand = Plus / Plus
Query: 29 tgcctggctccctgtatgccatacactaagctcatcgacca-tcgaggacttacgtggat 87
||||||||||||||||||||||| | |||||||| || | || | ||| | ||||||
Sbjct: 6 tgcctggctccctgtatgccatatatgaagctcattgaaaaatcaatgacctttgtggat 65
Query: 88 ggcgtatgaggagccaagcatatt 111
||||||||||||||||||||||||
Sbjct: 66 ggcgtatgaggagccaagcatatt 89
>48542_gma-miR160a:pmrd
Length = 119
Score = 61.9 bits (31), Expect = 1e-10
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 82 gtggatggcgtatgaggagccaagcatattt 112
|||||||||||||||||||||||||||||||
Sbjct: 75 gtggatggcgtatgaggagccaagcatattt 105
>54783_vvi-miR160f:pmrd
Length = 102
Score = 58.0 bits (29), Expect = 2e-09
Identities = 75/89 (84%), Gaps = 1/89 (1%)
Strand = Plus / Plus
Query: 23 catatatgcctggctccctgtatgccatacactaagctcatcgac-catcgaggacttac 81
|||||||||||||||||||||||||||| | ||| || || | |||||| | | | |
Sbjct: 5 catatatgcctggctccctgtatgccatttgcagagcccaccggcacatcgatggccttc 64
Query: 82 gtggatggcgtatgaggagccaagcatat 110
|||||||||||||||||||||| ||||||
Sbjct: 65 gtggatggcgtatgaggagccatgcatat 93
>51610_ptc-miR160c:pmrd
Length = 98
Score = 54.0 bits (27), Expect = 3e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 81 cgtggatggcgtatgaggagccaagcatatt 111
||||||||||||||||||||||| |||||||
Sbjct: 64 cgtggatggcgtatgaggagccatgcatatt 94
Score = 46.1 bits (23), Expect = 7e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 24 atatatgcctggctccctgtatgccat 50
|||| ||||||||||||||||||||||
Sbjct: 6 atatgtgcctggctccctgtatgccat 32
>51609_ptc-miR160b:pmrd
Length = 98
Score = 54.0 bits (27), Expect = 3e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 81 cgtggatggcgtatgaggagccaagcatatt 111
||||||||||||||||||||||| |||||||
Sbjct: 64 cgtggatggcgtatgaggagccatgcatatt 94
Score = 46.1 bits (23), Expect = 7e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 24 atatatgcctggctccctgtatgccat 50
|||| ||||||||||||||||||||||
Sbjct: 6 atatgtgcctggctccctgtatgccat 32
>54541_sly-miR160a:pmrd
Length = 129
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 25 tatatgcctggctccctgtatgccat 50
||||||||||||||||||||||||||
Sbjct: 16 tatatgcctggctccctgtatgccat 41
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 86 atggcgtatgaggagccaagcatatt 111
||||||||||||||||||||||||||
Sbjct: 81 atggcgtatgaggagccaagcatatt 106
>54942_zma-miR160e:pmrd
Length = 94
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 26 atatgcctggctccctgtatgcca 49
||||||||||||||||||||||||
Sbjct: 6 atatgcctggctccctgtatgcca 29
>54941_zma-miR160d:pmrd
Length = 142
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 26 atatgcctggctccctgtatgcca 49
||||||||||||||||||||||||
Sbjct: 18 atatgcctggctccctgtatgcca 41
>54675_tae-miR160:pmrd
Length = 148
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 26 atatgcctggctccctgtatgcca 49
||||||||||||||||||||||||
Sbjct: 19 atatgcctggctccctgtatgcca 42
>48829_osa-miR160d:pmrd
Length = 142
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 26 atatgcctggctccctgtatgcca 49
||||||||||||||||||||||||
Sbjct: 5 atatgcctggctccctgtatgcca 28
>48658_hvv-miR160a:pmrd
Length = 344
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 26 atatgcctggctccctgtatgcca 49
||||||||||||||||||||||||
Sbjct: 321 atatgcctggctccctgtatgcca 344
>54943_zma-miR160f:pmrd
Length = 116
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 26 atatgcctggctccctgtatgcc 48
|||||||||||||||||||||||
Sbjct: 18 atatgcctggctccctgtatgcc 40
>54781_vvi-miR160d:pmrd
Length = 102
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 28 atgcctggctccctgtatgccat 50
|||||||||||||||||||||||
Sbjct: 10 atgcctggctccctgtatgccat 32
>53874_ptc-miRf12052-akr:pmrd
Length = 110
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 27 tatgcctggctccctgtatgcca 49
|||||||||||||||||||||||
Sbjct: 10 tatgcctggctccctgtatgcca 32
>51611_ptc-miR160d:pmrd
Length = 103
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 27 tatgcctggctccctgtatgcca 49
|||||||||||||||||||||||
Sbjct: 9 tatgcctggctccctgtatgcca 31
>51608_ptc-miR160a:pmrd
Length = 102
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 27 tatgcctggctccctgtatgcca 49
|||||||||||||||||||||||
Sbjct: 9 tatgcctggctccctgtatgcca 31
>48830_osa-miR160e:pmrd
Length = 114
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 26 atatgcctggctccctgtatgcc 48
|||||||||||||||||||||||
Sbjct: 8 atatgcctggctccctgtatgcc 30
>46936_ath-miR160c:pmrd
Length = 89
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 27 tatgcctggctccctgtatgcca 49
|||||||||||||||||||||||
Sbjct: 3 tatgcctggctccctgtatgcca 25
>54946_zma-miR160i:pmrd
Length = 81
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 28 atgcctggctccctgtatgcca 49
||||||||||||||||||||||
Sbjct: 1 atgcctggctccctgtatgcca 22
>54574_smo-miR160a:pmrd
Length = 106
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 29 tgcctggctccctgtatgccat 50
||||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgccat 32
>48703_mtr-miR160d:pmrd
Length = 91
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 29 tgcctggctccctgtatgccat 50
||||||||||||||||||||||
Sbjct: 6 tgcctggctccctgtatgccat 27
>46865_aqc-miR160b:pmrd
Length = 82
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 29 tgcctggctccctgtatgccat 50
||||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgccat 22
>54947_zma-miR160m:pmrd
Length = 81
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 29 tgcctggctccctgtatgcca 49
|||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcca 21
>54945_zma-miR160h:pmrd
Length = 86
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 29 tgcctggctccctgtatgcca 49
|||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcca 21
>54944_zma-miR160g:pmrd
Length = 86
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 29 tgcctggctccctgtatgcca 49
|||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcca 21
>54940_zma-miR160c:pmrd
Length = 100
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 29 tgcctggctccctgtatgcca 49
|||||||||||||||||||||
Sbjct: 7 tgcctggctccctgtatgcca 27
>54939_zma-miR160b:pmrd
Length = 121
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 29 tgcctggctccctgtatgcca 49
|||||||||||||||||||||
Sbjct: 21 tgcctggctccctgtatgcca 41
>54938_zma-miR160a:pmrd
Length = 104
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 29 tgcctggctccctgtatgcca 49
|||||||||||||||||||||
Sbjct: 10 tgcctggctccctgtatgcca 30
>54780_vvi-miR160c:pmrd
Length = 106
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 29 tgcctggctccctgtatgcca 49
|||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgcca 31
>54759_ttu-miR160a:pmrd
Length = 87
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 29 tgcctggctccctgtatgcca 49
|||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcca 21
>54575_smo-miR160b:pmrd
Length = 108
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 29 tgcctggctccctgtatgcca 49
|||||||||||||||||||||
Sbjct: 13 tgcctggctccctgtatgcca 33
>54408_sbi-miR160e:pmrd
Length = 95
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 29 tgcctggctccctgtatgcca 49
|||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcca 21
>54407_sbi-miR160d:pmrd
Length = 100
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 29 tgcctggctccctgtatgcca 49
|||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcca 21
>54406_sbi-miR160c:pmrd
Length = 83
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 29 tgcctggctccctgtatgcca 49
|||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcca 21
>54405_sbi-miR160b:pmrd
Length = 82
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 29 tgcctggctccctgtatgcca 49
|||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcca 21
>54404_sbi-miR160a:pmrd
Length = 84
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 29 tgcctggctccctgtatgcca 49
|||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcca 21
>51364_ppt-miR160f:pmrd
Length = 138
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 29 tgcctggctccctgtatgcca 49
|||||||||||||||||||||
Sbjct: 30 tgcctggctccctgtatgcca 50
>51363_ppt-miR160e:pmrd
Length = 138
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 29 tgcctggctccctgtatgcca 49
|||||||||||||||||||||
Sbjct: 30 tgcctggctccctgtatgcca 50
>51359_ppt-miR160a:pmrd
Length = 99
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 29 tgcctggctccctgtatgcca 49
|||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgcca 31
>51334_pga-miR160:pmrd
Length = 80
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 29 tgcctggctccctgtatgcca 49
|||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcca 21
>48833_osa-miR160n:pmrd
Length = 131
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 29 tgcctggctccctgtatgcca 49
|||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcca 21
>48832_osa-miR160m:pmrd
Length = 82
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 29 tgcctggctccctgtatgcca 49
|||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcca 21
>48828_osa-miR160c:pmrd
Length = 99
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 29 tgcctggctccctgtatgcca 49
|||||||||||||||||||||
Sbjct: 7 tgcctggctccctgtatgcca 27
>48827_osa-miR160b:pmrd
Length = 139
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 29 tgcctggctccctgtatgcca 49
|||||||||||||||||||||
Sbjct: 30 tgcctggctccctgtatgcca 50
>48826_osa-miR160a:pmrd
Length = 88
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 29 tgcctggctccctgtatgcca 49
|||||||||||||||||||||
Sbjct: 4 tgcctggctccctgtatgcca 24
>48791_oba-miR160:pmrd
Length = 90
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 29 tgcctggctccctgtatgcca 49
|||||||||||||||||||||
Sbjct: 4 tgcctggctccctgtatgcca 24
>48635_gra-miR160b:pmrd
Length = 293
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 28 atgcctggctccctgtatgcc 48
|||||||||||||||||||||
Sbjct: 272 atgcctggctccctgtatgcc 292
>48634_gra-miR160a:pmrd
Length = 106
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 28 atgcctggctccctgtatgcc 48
|||||||||||||||||||||
Sbjct: 85 atgcctggctccctgtatgcc 105
>48306_bdi-miR160:pmrd
Length = 120
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 28 atgcctggctccctgtatgcc 48
|||||||||||||||||||||
Sbjct: 17 atgcctggctccctgtatgcc 37
>47338_ath-miRf10238-akr:pmrd
Length = 89
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 29 tgcctggctccctgtatgcca 49
|||||||||||||||||||||
Sbjct: 5 tgcctggctccctgtatgcca 25
>46935_ath-miR160b:pmrd
Length = 89
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 29 tgcctggctccctgtatgcca 49
|||||||||||||||||||||
Sbjct: 5 tgcctggctccctgtatgcca 25
>54760_ttu-miR160b:pmrd
Length = 218
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 29 tgcctggctccctgtatgcc 48
||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcc 20
>54528_sce-miR160:pmrd
Length = 180
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 29 tgcctggctccctgtatgcc 48
||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcc 20
>51367_ppt-miR160i:pmrd
Length = 139
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 30 gcctggctccctgtatgcca 49
||||||||||||||||||||
Sbjct: 31 gcctggctccctgtatgcca 50
>51360_ppt-miR160b:pmrd
Length = 103
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 30 gcctggctccctgtatgcca 49
||||||||||||||||||||
Sbjct: 12 gcctggctccctgtatgcca 31
>48659_hvv-miR160b:pmrd
Length = 47
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 29 tgcctggctccctgtatgcc 48
||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcc 20
>48544_gma-miR160o:pmrd
Length = 503
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 29 tgcctggctccctgtatgcc 48
||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcc 20
>48543_gma-miR160n:pmrd
Length = 107
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 29 tgcctggctccctgtatgcc 48
||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcc 20
