miRNEST 2.0, an integrative microRNA resource :: BLAST
>49007_osa-miR444f:pmrd
Length = 154
Score = 87.7 bits (44), Expect = 2e-18
Identities = 44/44 (100%)
Strand = Plus / Plus
Query: 78 ctttcttgcaagttgtgcagttgttgcctcaagcttgctgcctc 121
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 109 ctttcttgcaagttgtgcagttgttgcctcaagcttgctgcctc 152
Score = 50.1 bits (25), Expect = 4e-07
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 1 ggtggcaccaagcatgaggcaggaactgcattacttgcaag 41
||||||||||||||||||| ||||||||||||||||||
Sbjct: 3 ggtggcaccaagcatgaggttacaactgcattacttgcaag 43
Score = 42.1 bits (21), Expect = 9e-05
Identities = 39/45 (86%)
Strand = Plus / Minus
Query: 4 ggcaccaagcatgaggcaggaactgcattacttgcaagaaagtca 48
|||| ||||| ||||||| ||||||| ||||||||||||||||
Sbjct: 150 ggcagcaagcttgaggcaacaactgcacaacttgcaagaaagtca 106
>48798_oru-miR444:pmrd
Length = 165
Score = 87.7 bits (44), Expect = 2e-18
Identities = 44/44 (100%)
Strand = Plus / Plus
Query: 78 ctttcttgcaagttgtgcagttgttgcctcaagcttgctgcctc 121
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 114 ctttcttgcaagttgtgcagttgttgcctcaagcttgctgcctc 157
Score = 50.1 bits (25), Expect = 4e-07
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 1 ggtggcaccaagcatgaggcaggaactgcattacttgcaag 41
||||||||||||||||||| ||||||||||||||||||
Sbjct: 8 ggtggcaccaagcatgaggttacaactgcattacttgcaag 48
Score = 42.1 bits (21), Expect = 9e-05
Identities = 39/45 (86%)
Strand = Plus / Minus
Query: 4 ggcaccaagcatgaggcaggaactgcattacttgcaagaaagtca 48
|||| ||||| ||||||| ||||||| ||||||||||||||||
Sbjct: 155 ggcagcaagcttgaggcaacaactgcacaacttgcaagaaagtca 111
>54743_tae-miR2024b:pmrd
Length = 142
Score = 85.7 bits (43), Expect = 7e-18
Identities = 52/55 (94%)
Strand = Plus / Plus
Query: 67 catacttgtggctttcttgcaagttgtgcagttgttgcctcaagcttgctgcctc 121
|||||||||||||||||||||||| |||||||| ||||||||||||||||||||
Sbjct: 87 catacttgtggctttcttgcaagtcatgcagttgctgcctcaagcttgctgcctc 141
Score = 56.0 bits (28), Expect = 6e-09
Identities = 43/48 (89%)
Strand = Plus / Minus
Query: 4 ggcaccaagcatgaggcaggaactgcattacttgcaagaaagtcacaa 51
|||| ||||| |||||||| |||||||| ||||||||||||| |||||
Sbjct: 139 ggcagcaagcttgaggcagcaactgcatgacttgcaagaaagccacaa 92
Score = 46.1 bits (23), Expect = 6e-06
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 4 ggcaccaagcatgaggcaggaactgcattacttgc 38
|||||| ||||||||||| |||||||||||||||
Sbjct: 4 ggcaccgagcatgaggcaacaactgcattacttgc 38
>54691_tae-miR444:pmrd
Length = 426
Score = 85.7 bits (43), Expect = 7e-18
Identities = 52/55 (94%)
Strand = Plus / Plus
Query: 67 catacttgtggctttcttgcaagttgtgcagttgttgcctcaagcttgctgcctc 121
|||||||||||||||||||||||| |||||||| ||||||||||||||||||||
Sbjct: 122 catacttgtggctttcttgcaagtcatgcagttgctgcctcaagcttgctgcctc 176
Score = 56.0 bits (28), Expect = 6e-09
Identities = 43/48 (89%)
Strand = Plus / Minus
Query: 4 ggcaccaagcatgaggcaggaactgcattacttgcaagaaagtcacaa 51
|||| ||||| |||||||| |||||||| ||||||||||||| |||||
Sbjct: 174 ggcagcaagcttgaggcagcaactgcatgacttgcaagaaagccacaa 127
Score = 46.1 bits (23), Expect = 6e-06
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 4 ggcaccaagcatgaggcaggaactgcattacttgc 38
|||||| ||||||||||| |||||||||||||||
Sbjct: 22 ggcaccgagcatgaggcaacaactgcattacttgc 56
>54742_tae-miR2024a:pmrd
Length = 118
Score = 83.8 bits (42), Expect = 3e-17
Identities = 97/114 (85%), Gaps = 1/114 (0%)
Strand = Plus / Plus
Query: 4 ggcaccaagcatgaggcaggaactgcattacttgcaagaaagtcacaaaatcaattgcaa 63
||||||||||||||||| |||||||||||||||||| |||| |||||||| | ||
Sbjct: 1 ggcaccaagcatgaggcgacaactgcattacttgcaaggaagttacaaaatcta-tgggt 59
Query: 64 gatcatacttgtggctttcttgcaagttgtgcagttgttgcctcaagcttgctg 117
|||||| | ||| |||||| |||||||||||||||| || |||||||||||||
Sbjct: 60 catcataatcgtgactttctcgcaagttgtgcagttgctgtctcaagcttgctg 113
>54376_pvi-miR444:pmrd
Length = 127
Score = 77.8 bits (39), Expect = 2e-15
Identities = 42/43 (97%)
Strand = Plus / Plus
Query: 79 tttcttgcaagttgtgcagttgttgcctcaagcttgctgcctc 121
||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 77 tttcttgcaagttgtgcagttgttgtctcaagcttgctgcctc 119
Score = 40.1 bits (20), Expect = 4e-04
Identities = 32/36 (88%)
Strand = Plus / Minus
Query: 79 tttcttgcaagttgtgcagttgttgcctcaagcttg 114
||||||||||| | |||||||| |||||| ||||||
Sbjct: 50 tttcttgcaagatatgcagttgctgcctctagcttg 15
>49006_osa-miR444e:pmrd
Length = 140
Score = 48.1 bits (24), Expect = 2e-06
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 85 gcaagttgtgcagttgttgcctcaagcttgctgcct 120
||||||| |||||||| |||||||||||| ||||||
Sbjct: 91 gcaagttatgcagttgctgcctcaagcttactgcct 126
>48319_bdi-miR444:pmrd
Length = 110
Score = 48.1 bits (24), Expect = 2e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 87 aagttgtgcagttgttgcctcaagcttgctgc 118
||||| |||||||| |||||||||||||||||
Sbjct: 79 aagttatgcagttgctgcctcaagcttgctgc 110
>55114_zma-miR444a:pmrd
Length = 138
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 102 tgcctcaagcttgctgcctc 121
||||||||||||||||||||
Sbjct: 5 tgcctcaagcttgctgcctc 24
