miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>48250_ath-miRf11150-akr:pmrd
Length = 154
Score = 48.1 bits (24), Expect = 1e-06
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 78 tccttatgagcaatccccattcctcaagcttctgtataga 117
||||||||||||||| |||||||||| || || |||||||
Sbjct: 11 tccttatgagcaatctccattcctcaggcgtcggtataga 50
Score = 42.1 bits (21), Expect = 9e-05
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 68 gatagtagcatccttatgagcaatc 92
||||||| |||||||||||||||||
Sbjct: 154 gatagtaacatccttatgagcaatc 130
>47960_ath-miRf10860-akr:pmrd
Length = 154
Score = 48.1 bits (24), Expect = 1e-06
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 78 tccttatgagcaatccccattcctcaagcttctgtataga 117
||||||||||||||| |||||||||| || || |||||||
Sbjct: 144 tccttatgagcaatctccattcctcaggcgtcggtataga 105
Score = 42.1 bits (21), Expect = 9e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 68 gatagtagcatccttatgagcaatc 92
||||||| |||||||||||||||||
Sbjct: 1 gatagtaacatccttatgagcaatc 25
>47670_ath-miRf10570-akr:pmrd
Length = 154
Score = 48.1 bits (24), Expect = 1e-06
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 78 tccttatgagcaatccccattcctcaagcttctgtataga 117
||||||||||||||| |||||||||| || || |||||||
Sbjct: 11 tccttatgagcaatctccattcctcaggcgtcggtataga 50
Score = 42.1 bits (21), Expect = 9e-05
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 68 gatagtagcatccttatgagcaatc 92
||||||| |||||||||||||||||
Sbjct: 154 gatagtaacatccttatgagcaatc 130
