miRNEST 2.0, an integrative microRNA resource :: BLAST
>49455_osa-miRf10240-akr:pmrd
Length = 128
Score = 127 bits (64), Expect = 3e-30
Identities = 109/124 (87%)
Strand = Plus / Plus
Query: 41 ggaaatcacgagacgaatcttttaagcctaattagtccatgattagccttaagtgctaca 100
|||||||| |||||||||||||| |||||||||||| ||||||| || |||||||||||
Sbjct: 5 ggaaatcatgagacgaatcttttgagcctaattagtatatgattaaccataagtgctaca 64
Query: 101 ataacacatatgtgctaatgatggcttaattaggcttaatagattcgtctcgcaatttcc 160
||||| || |||||||||| | || ||||||||||| || ||||||||||||| |||||
Sbjct: 65 ataacccacatgtgctaataacggattaattaggctcaaaagattcgtctcgcggtttcc 124
Query: 161 aggc 164
||||
Sbjct: 125 aggc 128
Score = 48.1 bits (24), Expect = 3e-06
Identities = 42/48 (87%)
Strand = Plus / Minus
Query: 40 tggaaatcacgagacgaatcttttaagcctaattagtccatgattagc 87
|||||| | ||||||||||||||| |||||||||| ||| | ||||||
Sbjct: 125 tggaaaccgcgagacgaatcttttgagcctaattaatccgttattagc 78
>51000_osa-miRf11785-akr:pmrd
Length = 128
Score = 123 bits (62), Expect = 5e-29
Identities = 107/122 (87%)
Strand = Plus / Minus
Query: 43 aaatcacgagacgaatcttttaagcctaattagtccatgattagccttaagtgctacaat 102
||||| |||||| |||||||| |||||||||||| ||||||||||| ||||||||||| |
Sbjct: 122 aaatcgcgagacaaatcttttgagcctaattagttcatgattagccataagtgctacagt 63
Query: 103 aacacatatgtgctaatgatggcttaattaggcttaatagattcgtctcgcaatttccag 162
||| | ||||| |||||| |||||||||||||| || ||||||||||||| |||||||
Sbjct: 62 aacctacatgtgttaatgacggcttaattaggctcaaaagattcgtctcgcggtttccag 3
Query: 163 gc 164
||
Sbjct: 2 gc 1
Score = 46.1 bits (23), Expect = 1e-05
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 40 tggaaatcacgagacgaatcttttaagcctaatta 74
|||||| | ||||||||||||||| ||||||||||
Sbjct: 4 tggaaaccgcgagacgaatcttttgagcctaatta 38
>49733_osa-miRf10518-akr:pmrd
Length = 122
Score = 113 bits (57), Expect = 5e-26
Identities = 99/113 (87%)
Strand = Plus / Minus
Query: 41 ggaaatcacgagacgaatcttttaagcctaattagtccatgattagccttaagtgctaca 100
|||||| |||||||||||||||| ||||||||||||| |||||| || ||| |||||||
Sbjct: 121 ggaaataacgagacgaatcttttgagcctaattagtctgtgattaaccataaatgctaca 62
Query: 101 ataacacatatgtgctaatgatggcttaattaggcttaatagattcgtctcgc 153
|||| || |||| ||||||| |||||||||||||| || |||||||||||||
Sbjct: 61 gtaacccacatgtactaatgacggcttaattaggctcaaaagattcgtctcgc 9
Score = 44.1 bits (22), Expect = 4e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 49 cgagacgaatcttttaagcctaatta 74
||||||||||||||| ||||||||||
Sbjct: 10 cgagacgaatcttttgagcctaatta 35
>51249_osa-miRf12034-akr:pmrd
Length = 121
Score = 109 bits (55), Expect = 8e-25
Identities = 91/103 (88%)
Strand = Plus / Plus
Query: 51 agacgaatcttttaagcctaattagtccatgattagccttaagtgctacaataacacata 110
||||||||||||| |||||||||||||||||||||| ||||||||||| |||| | ||
Sbjct: 12 agacgaatcttttgagcctaattagtccatgattagttataagtgctacagtaacccgta 71
Query: 111 tgtgctaatgatggcttaattaggcttaatagattcgtctcgc 153
||||||||||| || ||||||||||| || |||||| ||||||
Sbjct: 72 tgtgctaatgacggattaattaggctcaagagattcatctcgc 114
>50021_osa-miRf10806-akr:pmrd
Length = 123
Score = 107 bits (54), Expect = 3e-24
Identities = 101/116 (87%), Gaps = 3/116 (2%)
Strand = Plus / Minus
Query: 41 ggaaatcacgagacgaatcttttaagcctaattagtcc---atgattagccttaagtgct 97
||||||| |||||||||||||||||||||||||||| | | |||||||| ||||||||
Sbjct: 123 ggaaatcgcgagacgaatcttttaagcctaattagtactacacgattagccataagtgct 64
Query: 98 acaataacacatatgtgctaatgatggcttaattaggcttaatagattcgtctcgc 153
||| ||| || |||||||||||| || ||||||||||| || |||||||||||||
Sbjct: 63 acagtaatccacatgtgctaatgacggattaattaggctcaaaagattcgtctcgc 8
Score = 52.0 bits (26), Expect = 2e-07
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 127 taattaggcttaatagattcgtctcgcaatttcc 160
||||||||||||| ||||||||||||| ||||||
Sbjct: 90 taattaggcttaaaagattcgtctcgcgatttcc 123
Score = 46.1 bits (23), Expect = 1e-05
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 49 cgagacgaatcttttaagcctaattagtccatgattagc 87
||||||||||||||| |||||||||| ||| | ||||||
Sbjct: 9 cgagacgaatcttttgagcctaattaatccgtcattagc 47
>49652_osa-miRf10437-akr:pmrd
Length = 120
Score = 105 bits (53), Expect = 1e-23
Identities = 98/113 (86%)
Strand = Plus / Plus
Query: 41 ggaaatcacgagacgaatcttttaagcctaattagtccatgattagccttaagtgctaca 100
||||||| |||||| |||||||| |||||||||||||||||||||||| ||| ||||| |
Sbjct: 1 ggaaatcgcgagacaaatcttttgagcctaattagtccatgattagccataaatgctata 60
Query: 101 ataacacatatgtgctaatgatggcttaattaggcttaatagattcgtctcgc 153
|||| || || | |||||||||| ||||||| ||| || |||||||||||||
Sbjct: 61 gtaacccaaatatactaatgatggattaattatgctcaaaagattcgtctcgc 113
Score = 44.1 bits (22), Expect = 4e-05
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 49 cgagacgaatcttttaagcctaattagtccatgattag 86
||||||||||||||| ||| |||||| ||||| |||||
Sbjct: 112 cgagacgaatcttttgagcataattaatccatcattag 75
>50516_osa-miRf11301-akr:pmrd
Length = 139
Score = 101 bits (51), Expect = 2e-22
Identities = 75/83 (90%)
Strand = Plus / Minus
Query: 23 taattgcacagtttggttggaaatcacgagacgaatcttttaagcctaattagtccatga 82
||||||||||||||| |||||||| ||||||||||||||| ||||||||||||| ||||
Sbjct: 94 taattgcacagtttgcatggaaatcgcgagacgaatcttttgagcctaattagtctatga 35
Query: 83 ttagccttaagtgctacaataac 105
||| || ||||||||||| ||||
Sbjct: 34 ttaaccataagtgctacagtaac 12
Score = 48.1 bits (24), Expect = 3e-06
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 127 taattaggcttaatagattcgtctcgcaatttccaggcaa 166
|||||||||| || ||||||||||||| ||||||| ||||
Sbjct: 43 taattaggctcaaaagattcgtctcgcgatttccatgcaa 82
>51304_osa-miRf12089-akr:pmrd
Length = 120
Score = 91.7 bits (46), Expect = 2e-19
Identities = 94/110 (85%)
Strand = Plus / Minus
Query: 41 ggaaatcacgagacgaatcttttaagcctaattagtccatgattagccttaagtgctaca 100
||||||| ||||||||||||||| || |||||||| |||||||| ||| ||||||||| |
Sbjct: 120 ggaaatcgcgagacgaatcttttgagtctaattagcccatgatttgccataagtgctata 61
Query: 101 ataacacatatgtgctaatgatggcttaattaggcttaatagattcgtct 150
||| || |||||||||||| | ||||||||||| || ||||||||||
Sbjct: 60 gcaacccacatgtgctaatgacgaattaattaggctcaaaagattcgtct 11
Score = 52.0 bits (26), Expect = 2e-07
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 41 ggaaatcacgagacgaatcttttaagcctaatta 74
||||||||| ||||||||||||| ||||||||||
Sbjct: 1 ggaaatcacaagacgaatcttttgagcctaatta 34
>50155_osa-miRf10940-akr:pmrd
Length = 96
Score = 71.9 bits (36), Expect = 2e-13
Identities = 48/52 (92%)
Strand = Plus / Plus
Query: 47 cacgagacgaatcttttaagcctaattagtccatgattagccttaagtgcta 98
|||||||| |||||||| || ||||||||||||||||||||| |||||||||
Sbjct: 1 cacgagacaaatcttttgagtctaattagtccatgattagccataagtgcta 52
>50895_osa-miRf11680-akr:pmrd
Length = 145
Score = 65.9 bits (33), Expect = 1e-11
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 113 tgctaatgatggcttaattaggcttaatagattcgtctcgc 153
|||||||||||| |||||||||||||||| |||||||||||
Sbjct: 84 tgctaatgatggattaattaggcttaataaattcgtctcgc 124
Score = 46.1 bits (23), Expect = 1e-05
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 128 aattaggcttaatagattcgtctcgcaattt 158
|||||||||||| |||| |||||||||||||
Sbjct: 45 aattaggcttaaaagatccgtctcgcaattt 15
Score = 46.1 bits (23), Expect = 1e-05
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 49 cgagacgaatcttttaagcctaattagtccatgattagc 87
|||||||||| | ||||||||||||| ||||| ||||||
Sbjct: 123 cgagacgaatttattaagcctaattaatccatcattagc 85
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 49 cgagacgaatcttttaagcctaatt 73
||||||| |||||||||||||||||
Sbjct: 21 cgagacggatcttttaagcctaatt 45
>49010_osa-miR445c:pmrd
Length = 260
Score = 65.9 bits (33), Expect = 1e-11
Identities = 39/41 (95%)
Strand = Plus / Minus
Query: 46 tcacgagacgaatcttttaagcctaattagtccatgattag 86
||||||||||||||||||||||||||||| ||||||||||
Sbjct: 176 tcacgagacgaatcttttaagcctaattacaccatgattag 136
Score = 50.1 bits (25), Expect = 6e-07
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 49 cgagacgaatcttttaagcctaattagtccatgatta 85
|||||||||| ||||||||||||||| ||||| ||||
Sbjct: 88 cgagacgaattttttaagcctaattaatccataatta 124
Score = 46.1 bits (23), Expect = 1e-05
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 116 taatgatggcttaattaggcttaatagattcgtctcgca 154
|||| |||| |||||||||||||| | ||||||||||||
Sbjct: 124 taattatggattaattaggcttaaaaaattcgtctcgca 86
Score = 44.1 bits (22), Expect = 4e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 127 taattaggcttaatagattcgtctcg 152
||||||||||||| ||||||||||||
Sbjct: 148 taattaggcttaaaagattcgtctcg 173
>49004_osa-miR442:pmrd
Length = 233
Score = 60.0 bits (30), Expect = 7e-10
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 113 tgctaatgatggcttaattaggcttaatagattcgtctcgca 154
||||||||| || |||||||||||||||| ||||||||||||
Sbjct: 129 tgctaatgacggattaattaggcttaataaattcgtctcgca 170
Score = 54.0 bits (27), Expect = 4e-08
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 128 aattaggcttaatagattcgtctcgcaattt 158
|||||||||||| ||||||||||||||||||
Sbjct: 90 aattaggcttaaaagattcgtctcgcaattt 60
Score = 54.0 bits (27), Expect = 4e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 49 cgagacgaatcttttaagcctaattagtccatgat 83
||||||||||||||||||||||||| ||||||||
Sbjct: 66 cgagacgaatcttttaagcctaattgctccatgat 100
>50149_osa-miRf10934-akr:pmrd
Length = 143
Score = 50.1 bits (25), Expect = 6e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 41 ggaaatcacgagacgaatcttttaagcctaatt 73
||||||| |||||||||||||||| ||||||||
Sbjct: 12 ggaaatcgcgagacgaatcttttaggcctaatt 44
Score = 42.1 bits (21), Expect = 2e-04
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 128 aattaggcttaatagattcgtctcgcaatttcc 160
|||||||| ||| ||||||||||||| ||||||
Sbjct: 44 aattaggcctaaaagattcgtctcgcgatttcc 12
Score = 42.1 bits (21), Expect = 2e-04
Identities = 45/53 (84%)
Strand = Plus / Plus
Query: 113 tgctaatgatggcttaattaggcttaatagattcgtctcgcaatttccaggca 165
||||||||| || |||||||||||| ||| |||| ||| || |||||| ||||
Sbjct: 83 tgctaatgacggattaattaggcttcataaattcatcttgcgatttcctggca 135
>49015_osa-miR445h:pmrd
Length = 277
Score = 50.1 bits (25), Expect = 6e-07
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 49 cgagacgaatcttttaagcctaattagtccatgatta 85
|||||||||| ||||||||||||||| ||||| ||||
Sbjct: 96 cgagacgaattttttaagcctaattaatccataatta 132
Score = 46.1 bits (23), Expect = 1e-05
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 116 taatgatggcttaattaggcttaatagattcgtctcgca 154
|||| |||| |||||||||||||| | ||||||||||||
Sbjct: 132 taattatggattaattaggcttaaaaaattcgtctcgca 94
Score = 44.1 bits (22), Expect = 4e-05
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 49 cgagacgaatcttttaagcctaattagtccatgattag 86
||||||||||||||| || ||||||| ||||||||||
Sbjct: 181 cgagacgaatcttttgagtctaattacaccatgattag 144
>49014_osa-miR445g:pmrd
Length = 275
Score = 50.1 bits (25), Expect = 6e-07
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 49 cgagacgaatcttttaagcctaattagtccatgatta 85
|||||||||| ||||||||||||||| ||||| ||||
Sbjct: 95 cgagacgaattttttaagcctaattaatccataatta 131
Score = 46.1 bits (23), Expect = 1e-05
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 116 taatgatggcttaattaggcttaatagattcgtctcgca 154
|||| |||| |||||||||||||| | ||||||||||||
Sbjct: 131 taattatggattaattaggcttaaaaaattcgtctcgca 93
>49012_osa-miR445e:pmrd
Length = 265
Score = 50.1 bits (25), Expect = 6e-07
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 49 cgagacgaatcttttaagcctaattagtccatgatta 85
|||||||||| ||||||||||||||| ||||| ||||
Sbjct: 90 cgagacgaattttttaagcctaattaatccataatta 126
Score = 46.1 bits (23), Expect = 1e-05
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 116 taatgatggcttaattaggcttaatagattcgtctcgca 154
|||| |||| |||||||||||||| | ||||||||||||
Sbjct: 126 taattatggattaattaggcttaaaaaattcgtctcgca 88
Score = 44.1 bits (22), Expect = 4e-05
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 49 cgagacgaatcttttaagcctaattagtccatgattag 86
||||||||||||||| || ||||||| ||||||||||
Sbjct: 175 cgagacgaatcttttgagtctaattacaccatgattag 138
>49008_osa-miR445a:pmrd
Length = 268
Score = 50.1 bits (25), Expect = 6e-07
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 49 cgagacgaatcttttaagcctaattagtccatgatta 85
|||||||||| ||||||||||||||| ||||| ||||
Sbjct: 83 cgagacgaattttttaagcctaattaatccataatta 119
Score = 46.1 bits (23), Expect = 1e-05
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 116 taatgatggcttaattaggcttaatagattcgtctcgca 154
|||| |||| |||||||||||||| | ||||||||||||
Sbjct: 119 taattatggattaattaggcttaaaaaattcgtctcgca 81
Score = 40.1 bits (20), Expect = 6e-04
Identities = 32/36 (88%)
Strand = Plus / Minus
Query: 49 cgagacgaatcttttaagcctaattagtccatgatt 84
||||||||||||||| || ||||||| ||||||||
Sbjct: 185 cgagacgaatcttttgagtctaattacaccatgatt 150
>51205_osa-miRf11990-akr:pmrd
Length = 135
Score = 44.1 bits (22), Expect = 4e-05
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 116 taatgatggcttaattaggcttaatagattcgtctcgc 153
|||| |||| ||||||||||| |||||||| |||||||
Sbjct: 48 taatcatggattaattaggctcaatagatttgtctcgc 11
>49013_osa-miR445f:pmrd
Length = 305
Score = 44.1 bits (22), Expect = 4e-05
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 52 gacgaatcttttaagcctaattagtccatgatta 85
||||||| ||||||||||||||| ||||| ||||
Sbjct: 114 gacgaattttttaagcctaattaatccataatta 147
Score = 44.1 bits (22), Expect = 4e-05
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 49 cgagacgaatcttttaagcctaattagtccatgattag 86
||||||||||||||| || ||||||| ||||||||||
Sbjct: 196 cgagacgaatcttttgagtctaattacaccatgattag 159
>49009_osa-miR445b:pmrd
Length = 264
Score = 44.1 bits (22), Expect = 4e-05
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 49 cgagacgaatcttttaagcctaattagtccatgattag 86
||||||||||||||| || ||||||| ||||||||||
Sbjct: 174 cgagacgaatcttttgagtctaattacaccatgattag 137
Score = 42.1 bits (21), Expect = 2e-04
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 49 cgagacgaatcttttaagcctaattagtccatgatta 85
||||||||| ||||||||||||||| ||||| ||||
Sbjct: 89 cgagacgaactttttaagcctaattaatccataatta 125
