miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>48411_bra-miR824:pmrd
Length = 632
Score = 97.6 bits (49), Expect = 6e-21
Identities = 64/69 (92%)
Strand = Plus / Plus
Query: 255 ggagtgggggagatgctgtgttattattcccttctcatcgatggtctagatgtgtgaggt 314
||||||||| || ||||| ||||||| ||||||||||||||||||||||||||| |||||
Sbjct: 559 ggagtggggaaggtgctgggttattagtcccttctcatcgatggtctagatgtgcgaggt 618
Query: 315 gactctcat 323
|||||||||
Sbjct: 619 gactctcat 627
>48378_bna-miR824:pmrd
Length = 632
Score = 97.6 bits (49), Expect = 6e-21
Identities = 64/69 (92%)
Strand = Plus / Plus
Query: 255 ggagtgggggagatgctgtgttattattcccttctcatcgatggtctagatgtgtgaggt 314
||||||||| || ||||| ||||||| ||||||||||||||||||||||||||| |||||
Sbjct: 559 ggagtggggaaggtgctgggttattagtcccttctcatcgatggtctagatgtgcgaggt 618
Query: 315 gactctcat 323
|||||||||
Sbjct: 619 gactctcat 627
>48392_bol-miR824:pmrd
Length = 634
Score = 93.7 bits (47), Expect = 9e-20
Identities = 65/70 (92%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 255 ggagtggggga-gatgctgtgttattattcccttctcatcgatggtctagatgtgtgagg 313
||||||||||| | ||||| | ||||||||||||||||||||||||||||||||| ||||
Sbjct: 560 ggagtgggggaaggtgctgggntattattcccttctcatcgatggtctagatgtgcgagg 619
Query: 314 tgactctcat 323
||||||||||
Sbjct: 620 tgactctcat 629
>47057_ath-miR824:pmrd
Length = 689
Score = 93.7 bits (47), Expect = 9e-20
Identities = 53/55 (96%)
Strand = Plus / Plus
Query: 279 tattcccttctcatcgatggtctagatgtgtgaggtgactctcatggaagtaaag 333
|||||||||||||||||||||||||||||| ||||||||||||||||| ||||||
Sbjct: 623 tattcccttctcatcgatggtctagatgtgcgaggtgactctcatggaggtaaag 677
