miRNEST 2.0, an integrative microRNA resource :: BLAST
>49004_osa-miR442:pmrd
Length = 233
Score = 109 bits (55), Expect = 5e-25
Identities = 101/115 (87%), Gaps = 1/115 (0%)
Strand = Plus / Minus
Query: 2 gtaaaccgtgagacaaatttattaagcctaattaatccgtcattagcacatgtgttaatg 61
|||||| | ||||| ||||||||||||||||||||||||||||||||| |||| ||| ||
Sbjct: 176 gtaaactgcgagacgaatttattaagcctaattaatccgtcattagcaaatgt-ttactg 118
Query: 62 tagcactttattgttaaatcatgaactaattaggcttaaaagattcgtctcgcaa 116
|||||| ||||| | |||||| | ||||||||||||||||||||||||||||
Sbjct: 117 tagcaccacattgtcagatcatggagcaattaggcttaaaagattcgtctcgcaa 63
Score = 40.1 bits (20), Expect = 4e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 88 taattaggcttaaaagattcgtctcgca 115
||||||||||||| | ||||||||||||
Sbjct: 143 taattaggcttaataaattcgtctcgca 170
>50895_osa-miRf11680-akr:pmrd
Length = 145
Score = 85.7 bits (43), Expect = 7e-18
Identities = 98/115 (85%), Gaps = 1/115 (0%)
Strand = Plus / Minus
Query: 2 gtaaaccgtgagacaaatttattaagcctaattaatccgtcattagcacatgtgttaatg 61
|||||||| ||||| ||||||||||||||||||||||| ||||||||| |||| ||| |
Sbjct: 131 gtaaaccgcgagacgaatttattaagcctaattaatccatcattagcaaatgt-ttactt 73
Query: 62 tagcactttattgttaaatcatgaactaattaggcttaaaagattcgtctcgcaa 116
|||||| ||||| |||| ||| ||||||||||||||||| ||||||||||
Sbjct: 72 tagcaccacattgtcaaattatggtgcaattaggcttaaaagatccgtctcgcaa 18
>49455_osa-miRf10240-akr:pmrd
Length = 128
Score = 79.8 bits (40), Expect = 4e-16
Identities = 96/111 (86%), Gaps = 4/111 (3%)
Strand = Plus / Minus
Query: 4 aaaccgtgagacaaatttattaagcctaattaatccgtcattagcacatgt--gttaatg 61
|||||| ||||| ||| | || |||||||||||||||| |||||||||||| |||| ||
Sbjct: 122 aaaccgcgagacgaatcttttgagcctaattaatccgttattagcacatgtgggttattg 63
Query: 62 tagcactttattgttaaatcatgaactaattaggcttaaaagattcgtctc 112
|||||| |||| ||| |||||| |||||||||||| ||||||||||||||
Sbjct: 62 tagcac-ttatggtt-aatcatatactaattaggctcaaaagattcgtctc 14
Score = 46.1 bits (23), Expect = 6e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 88 taattaggcttaaaagattcgtctcgc 114
|||||||||| ||||||||||||||||
Sbjct: 91 taattaggctcaaaagattcgtctcgc 117
>51000_osa-miRf11785-akr:pmrd
Length = 128
Score = 75.8 bits (38), Expect = 7e-15
Identities = 97/113 (85%), Gaps = 4/113 (3%)
Strand = Plus / Plus
Query: 4 aaaccgtgagacaaatttattaagcctaattaatccgtcattagcacatgt--gttaatg 61
|||||| ||||| ||| | || ||||||||||| ||||||||| ||||||| |||| ||
Sbjct: 7 aaaccgcgagacgaatcttttgagcctaattaagccgtcattaacacatgtaggttactg 66
Query: 62 tagcactttattgttaaatcatgaactaattaggcttaaaagattcgtctcgc 114
|||||||| || | ||| |||||||||||||||||| |||||||| |||||||
Sbjct: 67 tagcactt-atggctaa-tcatgaactaattaggctcaaaagatttgtctcgc 117
Score = 46.1 bits (23), Expect = 6e-06
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 88 taattaggcttaaaagattcgtctcgc 114
|||||||||| ||||||||||||||||
Sbjct: 38 taattaggctcaaaagattcgtctcgc 12
>50149_osa-miRf10934-akr:pmrd
Length = 143
Score = 75.8 bits (38), Expect = 7e-15
Identities = 84/98 (85%), Gaps = 1/98 (1%)
Strand = Plus / Minus
Query: 17 aatttattaagcctaattaatccgtcattagcacatgtgttaatgtagcactttattgtt 76
||||||| ||||||||||||||||||||||||| |||| ||| |||| ||| ||||||
Sbjct: 115 aatttatgaagcctaattaatccgtcattagcaaatgt-ttattgtaccacaacattgtt 57
Query: 77 aaatcatgaactaattaggcttaaaagattcgtctcgc 114
|||| ||| |||||||| |||||||||||||||||
Sbjct: 56 aaattatggcgcaattaggcctaaaagattcgtctcgc 19
>50021_osa-miRf10806-akr:pmrd
Length = 123
Score = 69.9 bits (35), Expect = 4e-13
Identities = 99/116 (85%), Gaps = 7/116 (6%)
Strand = Plus / Plus
Query: 4 aaaccgtgagacaaatttattaagcctaattaatccgtcattagcacatgtg--ttaatg 61
|||||| ||||| ||| | || |||||||||||||||||||||||||||||| ||| ||
Sbjct: 3 aaaccgcgagacgaatcttttgagcctaattaatccgtcattagcacatgtggattactg 62
Query: 62 tagcactttattgttaaatcat---gaactaattaggcttaaaagattcgtctcgc 114
|||||| |||| | | |||| | | |||||||||||||||||||||||||||||
Sbjct: 63 tagcac-ttatggct-aatcgtgtagtactaattaggcttaaaagattcgtctcgc 116
Score = 46.1 bits (23), Expect = 6e-06
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 88 taattaggcttaaaagattcgtctcgc 114
|||||||||| ||||||||||||||||
Sbjct: 34 taattaggctcaaaagattcgtctcgc 8
>51249_osa-miRf12034-akr:pmrd
Length = 121
Score = 65.9 bits (33), Expect = 6e-12
Identities = 77/88 (87%), Gaps = 4/88 (4%)
Strand = Plus / Minus
Query: 26 agcctaattaatccgtcattagcacat--gtgttaatgtagcactttattgttaaatcat 83
||||||||||||||||||||||||||| | |||| |||||||| |||| | ||||||
Sbjct: 97 agcctaattaatccgtcattagcacatacgggttactgtagcac-ttataact-aatcat 40
Query: 84 gaactaattaggcttaaaagattcgtct 111
| |||||||||||| |||||||||||||
Sbjct: 39 ggactaattaggctcaaaagattcgtct 12
>49733_osa-miRf10518-akr:pmrd
Length = 122
Score = 65.9 bits (33), Expect = 6e-12
Identities = 95/112 (84%), Gaps = 4/112 (3%)
Strand = Plus / Plus
Query: 4 aaaccgtgagacaaatttattaagcctaattaatccgtcattagcacatgt--gttaatg 61
|||||| ||||| ||| | || ||||||||||| |||||||||| |||||| |||| ||
Sbjct: 4 aaaccgcgagacgaatcttttgagcctaattaagccgtcattagtacatgtgggttactg 63
Query: 62 tagcactttattgttaaatcatgaactaattaggcttaaaagattcgtctcg 113
||||| ||||| ||| ||||| |||||||||||| |||||||||||||||
Sbjct: 64 tagca-tttatggtt-aatcacagactaattaggctcaaaagattcgtctcg 113
Score = 46.1 bits (23), Expect = 6e-06
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 88 taattaggcttaaaagattcgtctcgc 114
|||||||||| ||||||||||||||||
Sbjct: 35 taattaggctcaaaagattcgtctcgc 9
>49011_osa-miR445d:pmrd
Length = 312
Score = 54.0 bits (27), Expect = 2e-08
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 8 cgtgagacaaatttattaagcctaattaatccgtcattagcacatgt 54
||||||||||| || ||||||||||||||||| | |||| |||||||
Sbjct: 208 cgtgagacaaaatttttaagcctaattaatccataattaacacatgt 162
>51304_osa-miRf12089-akr:pmrd
Length = 120
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 26 agcctaattaatccgtcattagcacatgtg 55
|||||||||||| |||||||||||||||||
Sbjct: 25 agcctaattaattcgtcattagcacatgtg 54
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 88 taattaggcttaaaagattcgtct 111
|||||||||| |||||||||||||
Sbjct: 34 taattaggctcaaaagattcgtct 11
>49010_osa-miR445c:pmrd
Length = 260
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 88 taattaggcttaaaagattcgtctcg 113
||||||||||||||||||||||||||
Sbjct: 148 taattaggcttaaaagattcgtctcg 173
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 88 taattaggcttaaaagattcgtctcgca 115
||||||||||||||| ||||||||||||
Sbjct: 113 taattaggcttaaaaaattcgtctcgca 86
Score = 42.1 bits (21), Expect = 9e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 11 gagacaaatttattaagcctaattaatcc 39
||||| ||||| |||||||||||||||||
Sbjct: 89 gagacgaattttttaagcctaattaatcc 117
>50516_osa-miRf11301-akr:pmrd
Length = 139
Score = 50.1 bits (25), Expect = 4e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 86 actaattaggcttaaaagattcgtctcgc 114
|||||||||||| ||||||||||||||||
Sbjct: 41 actaattaggctcaaaagattcgtctcgc 69
>49652_osa-miRf10437-akr:pmrd
Length = 120
Score = 50.1 bits (25), Expect = 4e-07
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 78 aatcatgaactaattaggcttaaaagattcgtctcgc 114
||||||| |||||||||||| |||||||| |||||||
Sbjct: 44 aatcatggactaattaggctcaaaagatttgtctcgc 8
>49015_osa-miR445h:pmrd
Length = 277
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 88 taattaggcttaaaagattcgtctcgca 115
||||||||||||||| ||||||||||||
Sbjct: 121 taattaggcttaaaaaattcgtctcgca 94
Score = 42.1 bits (21), Expect = 9e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 11 gagacaaatttattaagcctaattaatcc 39
||||| ||||| |||||||||||||||||
Sbjct: 97 gagacgaattttttaagcctaattaatcc 125
>49014_osa-miR445g:pmrd
Length = 275
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 88 taattaggcttaaaagattcgtctcgca 115
||||||||||||||| ||||||||||||
Sbjct: 120 taattaggcttaaaaaattcgtctcgca 93
Score = 42.1 bits (21), Expect = 9e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 11 gagacaaatttattaagcctaattaatcc 39
||||| ||||| |||||||||||||||||
Sbjct: 96 gagacgaattttttaagcctaattaatcc 124
>49012_osa-miR445e:pmrd
Length = 265
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 88 taattaggcttaaaagattcgtctcgca 115
||||||||||||||| ||||||||||||
Sbjct: 115 taattaggcttaaaaaattcgtctcgca 88
Score = 42.1 bits (21), Expect = 9e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 11 gagacaaatttattaagcctaattaatcc 39
||||| ||||| |||||||||||||||||
Sbjct: 91 gagacgaattttttaagcctaattaatcc 119
>49008_osa-miR445a:pmrd
Length = 268
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 88 taattaggcttaaaagattcgtctcgca 115
||||||||||||||| ||||||||||||
Sbjct: 108 taattaggcttaaaaaattcgtctcgca 81
Score = 42.1 bits (21), Expect = 9e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 11 gagacaaatttattaagcctaattaatcc 39
||||| ||||| |||||||||||||||||
Sbjct: 84 gagacgaattttttaagcctaattaatcc 112
Score = 40.1 bits (20), Expect = 4e-04
Identities = 38/44 (86%)
Strand = Plus / Plus
Query: 71 attgttaaatcatgaactaattaggcttaaaagattcgtctcgc 114
||||| |||||||| ||||||| || ||||||||||||||||
Sbjct: 143 attgtcaaatcatggtgtaattagactcaaaagattcgtctcgc 186
>51205_osa-miRf11990-akr:pmrd
Length = 135
Score = 42.1 bits (21), Expect = 9e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 11 gagacaaatttattaagcctaattaatcc 39
||||||||| |||| ||||||||||||||
Sbjct: 13 gagacaaatctattgagcctaattaatcc 41
>49013_osa-miR445f:pmrd
Length = 305
Score = 40.1 bits (20), Expect = 4e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 88 taattaggcttaaaagattcgtctcgca 115
||||||||||||||| ||||||| ||||
Sbjct: 136 taattaggcttaaaaaattcgtcccgca 109
>49009_osa-miR445b:pmrd
Length = 264
Score = 40.1 bits (20), Expect = 4e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 88 taattaggcttaaaagattcgtctcgca 115
||||||||||||||| |||||||||||
Sbjct: 114 taattaggcttaaaaagttcgtctcgca 87
