miRNEST 2.0, an integrative microRNA resource :: BLAST
>49004_osa-miR442:pmrd
Length = 233
Score = 89.7 bits (45), Expect = 5e-19
Identities = 101/117 (86%), Gaps = 2/117 (1%)
Strand = Plus / Plus
Query: 21 ttgcgagacgaattttttgagcctaattagtccgtgattagacaatgttgtgctacagta 80
||||||||||||| |||| ||||||||| ||| |||| |||||||| |||||||||||
Sbjct: 63 ttgcgagacgaatcttttaagcctaattgctccatgatctgacaatgtggtgctacagta 122
Query: 81 aacatgtgctaatgatgggataattagtctttaataaattcg-ctcacagtttacag 136
||||| ||||||||| || ||||||| | |||||||||||| ||| ||||||||||
Sbjct: 123 aacatttgctaatgacggattaattaggc-ttaataaattcgtctcgcagtttacag 178
Score = 48.1 bits (24), Expect = 2e-06
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 22 tgcgagacgaattttttgagcctaattagtccgtgattag 61
|||||||||||||| || |||||||||| ||||| |||||
Sbjct: 170 tgcgagacgaatttattaagcctaattaatccgtcattag 131
>50895_osa-miRf11680-akr:pmrd
Length = 145
Score = 81.8 bits (41), Expect = 1e-16
Identities = 112/133 (84%), Gaps = 2/133 (1%)
Strand = Plus / Plus
Query: 7 agattgcgtgtattttgcgagacgaattttttgagcctaattagtccgtgattagacaat 66
|||||||||||| |||||||||| || |||| ||||||||| || | ||| ||||||
Sbjct: 4 agattgcgtgtaaattgcgagacggatcttttaagcctaattgcaccataatttgacaat 63
Query: 67 gttgtgctacagtaaacatgtgctaatgatgggataattagtctttaataaattcg-ctc 125
|| |||||| ||||||||| |||||||||||| ||||||| | |||||||||||| |||
Sbjct: 64 gtggtgctaaagtaaacatttgctaatgatggattaattaggc-ttaataaattcgtctc 122
Query: 126 acagtttacaggc 138
| ||||||||||
Sbjct: 123 gcggtttacaggc 135
>49733_osa-miRf10518-akr:pmrd
Length = 122
Score = 58.0 bits (29), Expect = 2e-09
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 24 cgagacgaattttttgagcctaattagtccgtgatta 60
|||||||||| |||||||||||||||||| |||||||
Sbjct: 113 cgagacgaatcttttgagcctaattagtctgtgatta 77
Score = 46.1 bits (23), Expect = 7e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 23 gcgagacgaattttttgagcctaatta 49
||||||||||| |||||||||||||||
Sbjct: 9 gcgagacgaatcttttgagcctaatta 35
>49008_osa-miR445a:pmrd
Length = 268
Score = 58.0 bits (29), Expect = 2e-09
Identities = 53/61 (86%)
Strand = Plus / Minus
Query: 23 gcgagacgaattttttgagcctaattagtccgtgattagacaatgttgtgctacagtaaa 82
||||||||||| ||||||| ||||||| || ||||| |||||||| ||||||||||||
Sbjct: 186 gcgagacgaatcttttgagtctaattacaccatgatttgacaatgtgatgctacagtaaa 127
Query: 83 c 83
|
Sbjct: 126 c 126
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 22 tgcgagacgaattttttgagcctaatta 49
||||||||||||||||| ||||||||||
Sbjct: 81 tgcgagacgaattttttaagcctaatta 108
>51249_osa-miRf12034-akr:pmrd
Length = 121
Score = 56.0 bits (28), Expect = 8e-09
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 26 agacgaattttttgagcctaattagtccgtgattag 61
|||||||| ||||||||||||||||||| |||||||
Sbjct: 12 agacgaatcttttgagcctaattagtccatgattag 47
>50021_osa-miRf10806-akr:pmrd
Length = 123
Score = 54.0 bits (27), Expect = 3e-08
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 23 gcgagacgaattttttgagcctaattagtccgtgattag 61
||||||||||| ||||||||||||||| ||||| |||||
Sbjct: 8 gcgagacgaatcttttgagcctaattaatccgtcattag 46
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 23 gcgagacgaattttttgagcctaattagt 51
||||||||||| |||| ||||||||||||
Sbjct: 116 gcgagacgaatcttttaagcctaattagt 88
>49652_osa-miRf10437-akr:pmrd
Length = 120
Score = 54.0 bits (27), Expect = 3e-08
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 23 gcgagacgaattttttgagcctaattagtccgtgattag 61
||||||| ||| ||||||||||||||||||| |||||||
Sbjct: 8 gcgagacaaatcttttgagcctaattagtccatgattag 46
>49455_osa-miRf10240-akr:pmrd
Length = 128
Score = 54.0 bits (27), Expect = 3e-08
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 23 gcgagacgaattttttgagcctaattagtccgtgattag 61
||||||||||| ||||||||||||||| ||||| |||||
Sbjct: 117 gcgagacgaatcttttgagcctaattaatccgttattag 79
Score = 46.1 bits (23), Expect = 7e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 25 gagacgaattttttgagcctaattagt 51
||||||||| |||||||||||||||||
Sbjct: 14 gagacgaatcttttgagcctaattagt 40
>50516_osa-miRf11301-akr:pmrd
Length = 139
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 23 gcgagacgaattttttgagcctaattagtc 52
||||||||||| ||||||||||||||||||
Sbjct: 69 gcgagacgaatcttttgagcctaattagtc 40
>49015_osa-miR445h:pmrd
Length = 277
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 22 tgcgagacgaattttttgagcctaatta 49
||||||||||||||||| ||||||||||
Sbjct: 94 tgcgagacgaattttttaagcctaatta 121
>49014_osa-miR445g:pmrd
Length = 275
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 22 tgcgagacgaattttttgagcctaatta 49
||||||||||||||||| ||||||||||
Sbjct: 93 tgcgagacgaattttttaagcctaatta 120
>49012_osa-miR445e:pmrd
Length = 265
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 22 tgcgagacgaattttttgagcctaatta 49
||||||||||||||||| ||||||||||
Sbjct: 88 tgcgagacgaattttttaagcctaatta 115
>49010_osa-miR445c:pmrd
Length = 260
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 22 tgcgagacgaattttttgagcctaatta 49
||||||||||||||||| ||||||||||
Sbjct: 86 tgcgagacgaattttttaagcctaatta 113
>51000_osa-miRf11785-akr:pmrd
Length = 128
Score = 46.1 bits (23), Expect = 7e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 23 gcgagacgaattttttgagcctaatta 49
||||||||||| |||||||||||||||
Sbjct: 12 gcgagacgaatcttttgagcctaatta 38
Score = 46.1 bits (23), Expect = 7e-06
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 23 gcgagacgaattttttgagcctaattagtccgtgattag 61
||||||| ||| ||||||||||||||||| | |||||||
Sbjct: 117 gcgagacaaatcttttgagcctaattagttcatgattag 79
>50155_osa-miRf10940-akr:pmrd
Length = 96
Score = 44.1 bits (22), Expect = 3e-05
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 24 cgagacgaattttttgagcctaattagtccgtgattag 61
|||||| ||| ||||||| ||||||||||| |||||||
Sbjct: 3 cgagacaaatcttttgagtctaattagtccatgattag 40
>50149_osa-miRf10934-akr:pmrd
Length = 143
Score = 44.1 bits (22), Expect = 3e-05
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 62 acaatgttgtgctacagtaaacatgtgctaatga 95
||||||||||| |||| ||||||| |||||||||
Sbjct: 58 acaatgttgtggtacaataaacatttgctaatga 91
>51304_osa-miRf12089-akr:pmrd
Length = 120
Score = 42.1 bits (21), Expect = 1e-04
Identities = 33/37 (89%)
Strand = Plus / Minus
Query: 23 gcgagacgaattttttgagcctaattagtccgtgatt 59
||||||||||| ||||||| |||||||| || |||||
Sbjct: 113 gcgagacgaatcttttgagtctaattagcccatgatt 77
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 26 agacgaattttttgagcctaatta 49
|||||||| |||||||||||||||
Sbjct: 11 agacgaatcttttgagcctaatta 34
>49013_osa-miR445f:pmrd
Length = 305
Score = 40.1 bits (20), Expect = 4e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 22 tgcgagacgaattttttgagcctaatta 49
|||| |||||||||||| ||||||||||
Sbjct: 109 tgcgggacgaattttttaagcctaatta 136
>49009_osa-miR445b:pmrd
Length = 264
Score = 40.1 bits (20), Expect = 4e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 22 tgcgagacgaattttttgagcctaatta 49
||||||||||| ||||| ||||||||||
Sbjct: 87 tgcgagacgaactttttaagcctaatta 114
