miRNEST 2.0, an integrative microRNA resource :: BLAST
>54376_pvi-miR444:pmrd
Length = 127
Score = 91.7 bits (46), Expect = 1e-19
Identities = 49/50 (98%)
Strand = Plus / Plus
Query: 83 ttttcttgcaagttgtgcagttgttgcctcaagcttgctgcctccctttg 132
|||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 76 ttttcttgcaagttgtgcagttgttgtctcaagcttgctgcctccctttg 125
Score = 42.1 bits (21), Expect = 1e-04
Identities = 33/37 (89%)
Strand = Plus / Minus
Query: 83 ttttcttgcaagttgtgcagttgttgcctcaagcttg 119
|||||||||||| | |||||||| |||||| ||||||
Sbjct: 51 ttttcttgcaagatatgcagttgctgcctctagcttg 15
>54691_tae-miR444:pmrd
Length = 426
Score = 89.7 bits (45), Expect = 5e-19
Identities = 57/61 (93%)
Strand = Plus / Plus
Query: 72 catacttgtggttttcttgcaagttgtgcagttgttgcctcaagcttgctgcctcccttt 131
||||||||||| |||||||||||| |||||||| |||||||||||||||||||||||||
Sbjct: 122 catacttgtggctttcttgcaagtcatgcagttgctgcctcaagcttgctgcctcccttt 181
Query: 132 g 132
|
Sbjct: 182 g 182
Score = 56.0 bits (28), Expect = 7e-09
Identities = 43/48 (89%)
Strand = Plus / Minus
Query: 10 ggcaccaagcatgaggcaggaactgcattacttgcaagaaagtcacaa 57
|||| ||||| |||||||| |||||||| ||||||||||||| |||||
Sbjct: 174 ggcagcaagcttgaggcagcaactgcatgacttgcaagaaagccacaa 127
Score = 48.1 bits (24), Expect = 2e-06
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 1 gcatatggtggcaccaagcatgaggcaggaactgcattacttgc 44
|||| ||| |||||| ||||||||||| |||||||||||||||
Sbjct: 13 gcatgtggcggcaccgagcatgaggcaacaactgcattacttgc 56
>49007_osa-miR444f:pmrd
Length = 154
Score = 87.7 bits (44), Expect = 2e-18
Identities = 44/44 (100%)
Strand = Plus / Plus
Query: 84 tttcttgcaagttgtgcagttgttgcctcaagcttgctgcctcc 127
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 110 tttcttgcaagttgtgcagttgttgcctcaagcttgctgcctcc 153
Score = 54.0 bits (27), Expect = 3e-08
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 5 atggtggcaccaagcatgaggcaggaactgcattacttgcaag 47
||||||||||||||||||||| ||||||||||||||||||
Sbjct: 1 atggtggcaccaagcatgaggttacaactgcattacttgcaag 43
Score = 42.1 bits (21), Expect = 1e-04
Identities = 39/45 (86%)
Strand = Plus / Minus
Query: 10 ggcaccaagcatgaggcaggaactgcattacttgcaagaaagtca 54
|||| ||||| ||||||| ||||||| ||||||||||||||||
Sbjct: 150 ggcagcaagcttgaggcaacaactgcacaacttgcaagaaagtca 106
>48798_oru-miR444:pmrd
Length = 165
Score = 87.7 bits (44), Expect = 2e-18
Identities = 44/44 (100%)
Strand = Plus / Plus
Query: 84 tttcttgcaagttgtgcagttgttgcctcaagcttgctgcctcc 127
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 115 tttcttgcaagttgtgcagttgttgcctcaagcttgctgcctcc 158
Score = 61.9 bits (31), Expect = 1e-10
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 1 gcatatggtggcaccaagcatgaggcaggaactgcattacttgcaag 47
||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 2 gcatatggtggcaccaagcatgaggttacaactgcattacttgcaag 48
Score = 42.1 bits (21), Expect = 1e-04
Identities = 39/45 (86%)
Strand = Plus / Minus
Query: 10 ggcaccaagcatgaggcaggaactgcattacttgcaagaaagtca 54
|||| ||||| ||||||| ||||||| ||||||||||||||||
Sbjct: 155 ggcagcaagcttgaggcaacaactgcacaacttgcaagaaagtca 111
>54743_tae-miR2024b:pmrd
Length = 142
Score = 79.8 bits (40), Expect = 5e-16
Identities = 52/56 (92%)
Strand = Plus / Plus
Query: 72 catacttgtggttttcttgcaagttgtgcagttgttgcctcaagcttgctgcctcc 127
||||||||||| |||||||||||| |||||||| |||||||||||||||||||||
Sbjct: 87 catacttgtggctttcttgcaagtcatgcagttgctgcctcaagcttgctgcctcc 142
Score = 56.0 bits (28), Expect = 7e-09
Identities = 43/48 (89%)
Strand = Plus / Minus
Query: 10 ggcaccaagcatgaggcaggaactgcattacttgcaagaaagtcacaa 57
|||| ||||| |||||||| |||||||| ||||||||||||| |||||
Sbjct: 139 ggcagcaagcttgaggcagcaactgcatgacttgcaagaaagccacaa 92
Score = 46.1 bits (23), Expect = 6e-06
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 10 ggcaccaagcatgaggcaggaactgcattacttgc 44
|||||| ||||||||||| |||||||||||||||
Sbjct: 4 ggcaccgagcatgaggcaacaactgcattacttgc 38
>54742_tae-miR2024a:pmrd
Length = 118
Score = 75.8 bits (38), Expect = 7e-15
Identities = 98/118 (83%)
Strand = Plus / Plus
Query: 10 ggcaccaagcatgaggcaggaactgcattacttgcaagaaagtcacaaaatcaattgcag 69
||||||||||||||||| |||||||||||||||||| |||| |||||||| || |
Sbjct: 1 ggcaccaagcatgaggcgacaactgcattacttgcaaggaagttacaaaatctatgggtc 60
Query: 70 gacatacttgtggttttcttgcaagttgtgcagttgttgcctcaagcttgctgcctcc 127
|||| | ||| ||||| |||||||||||||||| || ||||||||||||| ||||
Sbjct: 61 atcataatcgtgactttctcgcaagttgtgcagttgctgtctcaagcttgctgactcc 118
>55114_zma-miR444a:pmrd
Length = 138
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 107 tgcctcaagcttgctgcctccctttg 132
||||||||||||||||||||||||||
Sbjct: 5 tgcctcaagcttgctgcctccctttg 30
>49006_osa-miR444e:pmrd
Length = 140
Score = 48.1 bits (24), Expect = 2e-06
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 90 gcaagttgtgcagttgttgcctcaagcttgctgcct 125
||||||| |||||||| |||||||||||| ||||||
Sbjct: 91 gcaagttatgcagttgctgcctcaagcttactgcct 126
>48319_bdi-miR444:pmrd
Length = 110
Score = 48.1 bits (24), Expect = 2e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 92 aagttgtgcagttgttgcctcaagcttgctgc 123
||||| |||||||| |||||||||||||||||
Sbjct: 79 aagttatgcagttgctgcctcaagcttgctgc 110
>55115_zma-miR444b:pmrd
Length = 174
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 107 tgcctcaagcttgctgcctccctttg 132
|||||||||||| |||||||||||||
Sbjct: 5 tgcctcaagcttcctgcctccctttg 30
