miRNEST 2.0, an integrative microRNA resource :: BLAST
>54772_vvi-miR156g:pmrd
Length = 103
Score = 77.8 bits (39), Expect = 2e-15
Identities = 79/90 (87%), Gaps = 3/90 (3%)
Strand = Plus / Plus
Query: 23 tgttgttgacagaagatagagagcaccaacgatgaagttgcaa--actttgcatctcact 80
|||||||||||||||||||||||||| | ||||| || ||| | |||||||||||||
Sbjct: 6 tgttgttgacagaagatagagagcacagatgatgatgt-gcatggagtttgcatctcact 64
Query: 81 cctttgtactctctatacttctgtcatcac 110
||||||| ||||||| ||||||||||||||
Sbjct: 65 cctttgtgctctctagacttctgtcatcac 94
>51600_ptc-miR156j:pmrd
Length = 100
Score = 65.9 bits (33), Expect = 7e-12
Identities = 78/91 (85%), Gaps = 4/91 (4%)
Strand = Plus / Plus
Query: 23 tgttgttgacagaagatagagagcaccaacgatgaagttgcaa---actttgcatctcac 79
|||||||||||||||||||||||||| | ||||| | |||| ||| |||||| |||
Sbjct: 6 tgttgttgacagaagatagagagcacagatgatgatat-gcaatggactctgcatcccac 64
Query: 80 tcctttgtactctctatacttctgtcatcac 110
|||||||| |||||||| |||||||||||||
Sbjct: 65 tcctttgtgctctctatgcttctgtcatcac 95
>48531_gma-miR156d:pmrd
Length = 151
Score = 65.9 bits (33), Expect = 7e-12
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 70 tgcatctcactcctttgtactctctatacttctgtcatcac 110
||||||| |||||||||| ||||||||||||||||||||||
Sbjct: 95 tgcatcttactcctttgtgctctctatacttctgtcatcac 135
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 24 gttgttgacagaagatagagagcac 48
|||||||||||||||||||||||||
Sbjct: 17 gttgttgacagaagatagagagcac 41
>54774_vvi-miR156i:pmrd
Length = 103
Score = 63.9 bits (32), Expect = 3e-11
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 71 gcatctcactcctttgtactctctatacttctgtcatcac 110
||||||||||||||||| |||||||| |||||||||||||
Sbjct: 55 gcatctcactcctttgtgctctctattcttctgtcatcac 94
>46862_aqc-miR156b:pmrd
Length = 83
Score = 61.9 bits (31), Expect = 1e-10
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 70 tgcatctcactcctttgtactctctatacttctgtcatc 108
|||||||||||||||||| |||||||| |||||||||||
Sbjct: 45 tgcatctcactcctttgtgctctctatgcttctgtcatc 83
>51598_ptc-miR156h:pmrd
Length = 103
Score = 60.0 bits (30), Expect = 4e-10
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 69 ttgcatctcactcctttgtactctctatacttctgtcatcac 110
||||||||||||||||||| ||||||| |||||||||||||
Sbjct: 57 ttgcatctcactcctttgtgctctctagtcttctgtcatcac 98
>51597_ptc-miR156g:pmrd
Length = 103
Score = 60.0 bits (30), Expect = 4e-10
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 69 ttgcatctcactcctttgtactctctatacttctgtcatcac 110
||||||||||||||||||| ||||||| |||||||||||||
Sbjct: 57 ttgcatctcactcctttgtgctctctagtcttctgtcatcac 98
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 23 tgttgttgacagaagatagagagcac 48
||||||||||||||||||||||||||
Sbjct: 6 tgttgttgacagaagatagagagcac 31
>52045_ptc-miRf10223-akr:pmrd
Length = 86
Score = 58.0 bits (29), Expect = 2e-09
Identities = 74/87 (85%), Gaps = 4/87 (4%)
Strand = Plus / Plus
Query: 26 tgttgacagaagatagagagcaccaacgatgaagttgcaa---actttgcatctcactcc 82
||||||||||||||||||||||| | ||||| | |||| ||| |||||| ||||||
Sbjct: 1 tgttgacagaagatagagagcacagatgatgatat-gcaatggactctgcatcccactcc 59
Query: 83 tttgtactctctatacttctgtcatca 109
||||| |||||||| ||||||||||||
Sbjct: 60 tttgtgctctctatgcttctgtcatca 86
>48695_mtr-miR156e:pmrd
Length = 172
Score = 58.0 bits (29), Expect = 2e-09
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 70 tgcatctcactcctttgtactctctatacttctgtcatcac 110
||||| |||||||||||| |||||||| |||||||||||||
Sbjct: 131 tgcatatcactcctttgtgctctctatgcttctgtcatcac 171
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 24 gttgttgacagaagatagagagcac 48
|||||||||||||||||||||||||
Sbjct: 2 gttgttgacagaagatagagagcac 26
>52807_ptc-miRf10985-akr:pmrd
Length = 87
Score = 56.0 bits (28), Expect = 7e-09
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 69 ttgcatctcactcctttgtactctctatacttctgtcatc 108
||||||||||||||||||| ||||||| |||||||||||
Sbjct: 48 ttgcatctcactcctttgtgctctctagtcttctgtcatc 87
Score = 48.1 bits (24), Expect = 2e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 27 gttgacagaagatagagagcaccaacgatgaa 58
|||||||||||||||||||||| ||||||||
Sbjct: 1 gttgacagaagatagagagcactgacgatgaa 32
>48631_gra-miR157b:pmrd
Length = 91
Score = 56.0 bits (28), Expect = 7e-09
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 70 tgcatctcactcctttgtactctctatacttctgtcatca 109
|||||| ||||||||||| |||||||| ||||||||||||
Sbjct: 50 tgcatcccactcctttgtgctctctatgcttctgtcatca 89
>46925_ath-miR157b:pmrd
Length = 132
Score = 56.0 bits (28), Expect = 7e-09
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 67 ctttgcatctcactcctttgtactctctatacttctgtcatcac 110
|||||||||| |||||||||| ||||||| |||||||||||||
Sbjct: 69 ctttgcatcttactcctttgtgctctctagccttctgtcatcac 112
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 26 tgttgacagaagatagagagcac 48
|||||||||||||||||||||||
Sbjct: 17 tgttgacagaagatagagagcac 39
>46924_ath-miR157a:pmrd
Length = 98
Score = 56.0 bits (28), Expect = 7e-09
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 67 ctttgcatctcactcctttgtactctctatacttctgtcatcac 110
|||||||||| |||||||||| ||||||| |||||||||||||
Sbjct: 54 ctttgcatcttactcctttgtgctctctagccttctgtcatcac 97
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 26 tgttgacagaagatagagagcac 48
|||||||||||||||||||||||
Sbjct: 2 tgttgacagaagatagagagcac 24
>48532_gma-miR156e:pmrd
Length = 124
Score = 54.0 bits (27), Expect = 3e-08
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 71 gcatctcactcctttgtactctctatacttctgtcatca 109
||||||||||||||||| ||||||| ||||||||||||
Sbjct: 69 gcatctcactcctttgtgctctctagtcttctgtcatca 107
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 26 tgttgacagaagatagagagcac 48
|||||||||||||||||||||||
Sbjct: 19 tgttgacagaagatagagagcac 41
>51599_ptc-miR156i:pmrd
Length = 99
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 23 tgttgttgacagaagatagagagcac 48
||||||||||||||||||||||||||
Sbjct: 6 tgttgttgacagaagatagagagcac 31
Score = 52.0 bits (26), Expect = 1e-07
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 73 atctcactcctttgtactctctatacttctgtcatcac 110
||||||||||||||| |||||||| |||||| ||||||
Sbjct: 58 atctcactcctttgtgctctctatgcttctgccatcac 95
>48393_bra-miR157a:pmrd
Length = 149
Score = 52.0 bits (26), Expect = 1e-07
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 24 gttgttgacagaagatagagagcaccaacgatga 57
||||||||||||||||||||||||| || |||||
Sbjct: 10 gttgttgacagaagatagagagcactaaggatga 43
>48384_bol-miR157a:pmrd
Length = 106
Score = 52.0 bits (26), Expect = 1e-07
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 24 gttgttgacagaagatagagagcaccaacgatga 57
||||||||||||||||||||||||| || |||||
Sbjct: 2 gttgttgacagaagatagagagcactaaggatga 35
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 78 actcctttgtactctctatacttctgtca 106
|||| ||||| ||||||||||||||||||
Sbjct: 73 actcttttgtgctctctatacttctgtca 101
>48338_bna-miR156c:pmrd
Length = 155
Score = 52.0 bits (26), Expect = 1e-07
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 24 gttgttgacagaagatagagagcaccaacgatga 57
||||||||||||||||||||||||| || |||||
Sbjct: 14 gttgttgacagaagatagagagcactaaggatga 47
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 78 actcctttgtactctctatacttctgtca 106
|||| ||||| ||||||||||||||||||
Sbjct: 109 actcttttgtgctctctatacttctgtca 137
>48337_bna-miR156b:pmrd
Length = 208
Score = 52.0 bits (26), Expect = 1e-07
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 24 gttgttgacagaagatagagagcaccaacgatga 57
||||||||||||||||||||||||| || |||||
Sbjct: 21 gttgttgacagaagatagagagcactaaggatga 54
>46926_ath-miR157c:pmrd
Length = 217
Score = 52.0 bits (26), Expect = 1e-07
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 24 gttgttgacagaagatagagagcaccaacgatga 57
||||||||||||||||||||||||| || |||||
Sbjct: 20 gttgttgacagaagatagagagcactaaggatga 53
Score = 44.1 bits (22), Expect = 3e-05
Identities = 35/38 (92%), Gaps = 1/38 (2%)
Strand = Plus / Plus
Query: 70 tgcatctc-actcctttgtactctctatacttctgtca 106
|||||||| |||| ||||| ||||||||||||||||||
Sbjct: 151 tgcatctctactcttttgtgctctctatacttctgtca 188
>48630_gra-miR157a:pmrd
Length = 101
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 24 gttgttgacagaagatagagagcac 48
|||||||||||||||||||||||||
Sbjct: 1 gttgttgacagaagatagagagcac 25
Score = 50.1 bits (25), Expect = 4e-07
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 70 tgcatctcactcctttgtactctctatacttctgtcatcac 110
|||||| ||||||||||| |||| ||| |||||||||||||
Sbjct: 60 tgcatcccactcctttgtgctctttatgcttctgtcatcac 100
>48697_mtr-miR156h:pmrd
Length = 94
Score = 48.1 bits (24), Expect = 2e-06
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 71 gcatctcactcctttgtactctctatacttctgtcatcac 110
|||||||| |||||||| |||| ||| |||||||||||||
Sbjct: 54 gcatctcattcctttgtgctctttattcttctgtcatcac 93
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 26 tgttgacagaagatagagagcac 48
|||||||||||||||||||||||
Sbjct: 4 tgttgacagaagatagagagcac 26
>48696_mtr-miR156f:pmrd
Length = 94
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 25 ttgttgacagaagatagagagcac 48
||||||||||||||||||||||||
Sbjct: 3 ttgttgacagaagatagagagcac 26
>48537_gma-miR157c:pmrd
Length = 84
Score = 48.1 bits (24), Expect = 2e-06
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 71 gcatctcactcctttgtactctctatacttctgtca 106
||||||||||||||||| ||||||| |||||||||
Sbjct: 36 gcatctcactcctttgtgctctctagtcttctgtca 1
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 28 ttgacagaagatagagagcac 48
|||||||||||||||||||||
Sbjct: 84 ttgacagaagatagagagcac 64
>54771_vvi-miR156f:pmrd
Length = 105
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 26 tgttgacagaagatagagagcac 48
|||||||||||||||||||||||
Sbjct: 9 tgttgacagaagatagagagcac 31
>48530_gma-miR156c:pmrd
Length = 185
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 26 tgttgacagaagatagagagcac 48
|||||||||||||||||||||||
Sbjct: 144 tgttgacagaagatagagagcac 166
>54661_stu-miR157a:pmrd
Length = 91
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 28 ttgacagaagatagagagcaccaacgatga 57
||||||||||||||||||||| || |||||
Sbjct: 1 ttgacagaagatagagagcactaatgatga 30
>54532_sly-miR156a:pmrd
Length = 100
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 28 ttgacagaagatagagagcaccaacgatga 57
||||||||||||||||||||| || |||||
Sbjct: 1 ttgacagaagatagagagcactaatgatga 30
>54534_sly-miR156c:pmrd
Length = 83
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 28 ttgacagaagatagagagcac 48
|||||||||||||||||||||
Sbjct: 1 ttgacagaagatagagagcac 21
>54533_sly-miR156b:pmrd
Length = 84
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 28 ttgacagaagatagagagcac 48
|||||||||||||||||||||
Sbjct: 1 ttgacagaagatagagagcac 21
>48790_nta-miR157:pmrd
Length = 131
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 28 ttgacagaagatagagagcac 48
|||||||||||||||||||||
Sbjct: 1 ttgacagaagatagagagcac 21
>48675_lja-miR157a:pmrd
Length = 58
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 28 ttgacagaagatagagagcac 48
|||||||||||||||||||||
Sbjct: 1 ttgacagaagatagagagcac 21
>48642_han-miR157a:pmrd
Length = 86
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 28 ttgacagaagatagagagcac 48
|||||||||||||||||||||
Sbjct: 1 ttgacagaagatagagagcac 21
>46927_ath-miR157d:pmrd
Length = 221
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 24 gttgttgacagaagatagagagcac 48
|||| ||||||||||||||||||||
Sbjct: 19 gttgctgacagaagatagagagcac 43
>54570_smo-miR156b:pmrd
Length = 112
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 29 tgacagaagatagagagcac 48
||||||||||||||||||||
Sbjct: 12 tgacagaagatagagagcac 31
>54537_sly-miR157c:pmrd
Length = 123
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 28 ttgacagaagatagagagca 47
||||||||||||||||||||
Sbjct: 103 ttgacagaagatagagagca 122
>54536_sly-miR157b:pmrd
Length = 430
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 28 ttgacagaagatagagagca 47
||||||||||||||||||||
Sbjct: 1 ttgacagaagatagagagca 20
>54535_sly-miR157a:pmrd
Length = 53
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 28 ttgacagaagatagagagca 47
||||||||||||||||||||
Sbjct: 1 ttgacagaagatagagagca 20
>51552_pta-miR156b:pmrd
Length = 83
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 29 tgacagaagatagagagcac 48
||||||||||||||||||||
Sbjct: 3 tgacagaagatagagagcac 22
>51551_pta-miR156a:pmrd
Length = 83
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 29 tgacagaagatagagagcac 48
||||||||||||||||||||
Sbjct: 3 tgacagaagatagagagcac 22
>51323_pco-miR157:pmrd
Length = 184
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 28 ttgacagaagatagagagca 47
||||||||||||||||||||
Sbjct: 1 ttgacagaagatagagagca 20
>48698_mtr-miR157:pmrd
Length = 111
Score = 40.1 bits (20), Expect = 4e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 80 tcctttgtactctctatacttctgtcat 107
|||||||| ||||||| |||||||||||
Sbjct: 84 tcctttgtgctctctagacttctgtcat 111
>48677_lja-miR157c:pmrd
Length = 460
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 28 ttgacagaagatagagagca 47
||||||||||||||||||||
Sbjct: 1 ttgacagaagatagagagca 20
>48670_ini-miR157b:pmrd
Length = 183
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 28 ttgacagaagatagagagca 47
||||||||||||||||||||
Sbjct: 1 ttgacagaagatagagagca 20
>48669_ini-miR157a:pmrd
Length = 126
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 28 ttgacagaagatagagagca 47
||||||||||||||||||||
Sbjct: 1 ttgacagaagatagagagca 20
>48668_iba-miR157:pmrd
Length = 283
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 28 ttgacagaagatagagagca 47
||||||||||||||||||||
Sbjct: 1 ttgacagaagatagagagca 20
>46861_aqc-miR156a:pmrd
Length = 81
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 29 tgacagaagatagagagcac 48
||||||||||||||||||||
Sbjct: 1 tgacagaagatagagagcac 20
