miRNEST 2.0, an integrative microRNA resource :: BLAST
>47339_ath-miRf10239-akr:pmrd
Length = 129
Score = 87.7 bits (44), Expect = 2e-18
Identities = 47/48 (97%)
Strand = Plus / Plus
Query: 77 tggtttgtgagcagggattggatcccgccttgcatcaattgaatcgga 124
|||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 75 tggtttgtgagcagggattggatcccgccttgcatcaactgaatcgga 122
>46957_ath-miR168a:pmrd
Length = 138
Score = 87.7 bits (44), Expect = 2e-18
Identities = 47/48 (97%)
Strand = Plus / Plus
Query: 77 tggtttgtgagcagggattggatcccgccttgcatcaattgaatcgga 124
|||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 80 tggtttgtgagcagggattggatcccgccttgcatcaactgaatcgga 127
>46959_ath-miR168m:pmrd
Length = 104
Score = 75.8 bits (38), Expect = 8e-15
Identities = 38/38 (100%)
Strand = Plus / Plus
Query: 77 tggtttgtgagcagggattggatcccgccttgcatcaa 114
||||||||||||||||||||||||||||||||||||||
Sbjct: 63 tggtttgtgagcagggattggatcccgccttgcatcaa 100
>48349_bna-miR168:pmrd
Length = 133
Score = 60.0 bits (30), Expect = 4e-10
Identities = 85/102 (83%), Gaps = 1/102 (0%)
Strand = Plus / Plus
Query: 21 tcgcttggtgcaggtcgagaactaattgtctaacacatccacgaagttttacttgct-gg 79
||||||||||||||||| ||||| |||| || |||| ||||| | ||| | || | ||
Sbjct: 18 tcgcttggtgcaggtcgggaactgattggctgacaccgccacgtggctttccatggttgg 77
Query: 80 tttgtgagcagggattggatcccgccttgcatcaattgaatc 121
|||||||||||||| ||||||||||||| ||||| ||||||
Sbjct: 78 cttgtgagcagggatcggatcccgccttgtatcaagtgaatc 119
>51651_ptc-miR168b:pmrd
Length = 136
Score = 58.0 bits (29), Expect = 2e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 93 attggatcccgccttgcatcaattgaatcggag 125
|||||||||||||||||||||| ||||||||||
Sbjct: 103 attggatcccgccttgcatcaactgaatcggag 135
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 19 attcgcttggtgcaggtcgagaact 43
||||||||||||||||||| |||||
Sbjct: 9 attcgcttggtgcaggtcgggaact 33
>51650_ptc-miR168a:pmrd
Length = 160
Score = 58.0 bits (29), Expect = 2e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 93 attggatcccgccttgcatcaattgaatcggag 125
|||||||||||||||||||||| ||||||||||
Sbjct: 127 attggatcccgccttgcatcaactgaatcggag 159
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 18 gattcgcttggtgcaggtcgagaact 43
|||||||||||||||||||| |||||
Sbjct: 8 gattcgcttggtgcaggtcgggaact 33
>48560_gma-miR168:pmrd
Length = 125
Score = 58.0 bits (29), Expect = 2e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 93 attggatcccgccttgcatcaattgaatcggag 125
|||||||||||||||||||||| ||||||||||
Sbjct: 81 attggatcccgccttgcatcaactgaatcggag 113
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 19 attcgcttggtgcaggtcgagaac 42
||||||||||||||||||| ||||
Sbjct: 17 attcgcttggtgcaggtcgggaac 40
>55000_zma-miR168b:pmrd
Length = 104
Score = 56.0 bits (28), Expect = 7e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 96 ggatcccgccttgcatcaattgaatcggagcc 127
||||||||||||||||||| ||||||||||||
Sbjct: 63 ggatcccgccttgcatcaagtgaatcggagcc 94
>46958_ath-miR168b:pmrd
Length = 124
Score = 54.0 bits (27), Expect = 3e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 14 ctcggattcgcttggtgcaggtcgagaactaattg 48
|||||||||||||||||||||||| ||||| ||||
Sbjct: 12 ctcggattcgcttggtgcaggtcgggaactgattg 46
>54388_rco-miR168:pmrd
Length = 156
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 93 attggatcccgccttgcatcaattgaatcg 122
|||||||||||||||||||||| |||||||
Sbjct: 112 attggatcccgccttgcatcaactgaatcg 141
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 19 attcgcttggtgcaggtcgagaactaattg 48
||||||||||||||||||| ||||| ||||
Sbjct: 17 attcgcttggtgcaggtcgggaactgattg 46
>54802_vvi-miR168:pmrd
Length = 132
Score = 50.1 bits (25), Expect = 4e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 97 gatcccgccttgcatcaattgaatcggag 125
|||||||||||||||||| ||||||||||
Sbjct: 99 gatcccgccttgcatcaactgaatcggag 127
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 19 attcgcttggtgcaggtcgagaac 42
||||||||||||||||||| ||||
Sbjct: 9 attcgcttggtgcaggtcgggaac 32
>54999_zma-miR168a:pmrd
Length = 104
Score = 48.1 bits (24), Expect = 2e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 96 ggatcccgccttgcatcaattgaatcggagcc 127
||||||||||||||| ||| ||||||||||||
Sbjct: 63 ggatcccgccttgcaccaagtgaatcggagcc 94
>54637_sof-miR168b:pmrd
Length = 103
Score = 48.1 bits (24), Expect = 2e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 96 ggatcccgccttgcatcaattgaatcggagcc 127
||||||||||||||| ||| ||||||||||||
Sbjct: 62 ggatcccgccttgcaccaagtgaatcggagcc 93
>54636_sof-miR168a:pmrd
Length = 104
Score = 48.1 bits (24), Expect = 2e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 96 ggatcccgccttgcatcaattgaatcggagcc 127
||||||||||||||| ||| ||||||||||||
Sbjct: 63 ggatcccgccttgcaccaagtgaatcggagcc 94
>48873_osa-miR168a:pmrd
Length = 87
Score = 48.1 bits (24), Expect = 2e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 96 ggatcccgccttgcatcaattgaatcggagcc 127
||||||||||||||| ||| ||||||||||||
Sbjct: 55 ggatcccgccttgcaccaagtgaatcggagcc 86
>48872_osa-miR168a:pmrd
Length = 87
Score = 48.1 bits (24), Expect = 2e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 96 ggatcccgccttgcatcaattgaatcggagcc 127
||||||||||||||| ||| ||||||||||||
Sbjct: 55 ggatcccgccttgcaccaagtgaatcggagcc 86
>48871_osa-miR168a:pmrd
Length = 87
Score = 48.1 bits (24), Expect = 2e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 96 ggatcccgccttgcatcaattgaatcggagcc 127
||||||||||||||| ||| ||||||||||||
Sbjct: 55 ggatcccgccttgcaccaagtgaatcggagcc 86
>54375_pts-miR168b:pmrd
Length = 140
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 93 attggatcccgccttgcatcaa 114
||||||||||||||||||||||
Sbjct: 115 attggatcccgccttgcatcaa 136
>54374_pts-miR168a:pmrd
Length = 118
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 93 attggatcccgccttgcatcaa 114
||||||||||||||||||||||
Sbjct: 93 attggatcccgccttgcatcaa 114
>54366_ptr-miR168:pmrd
Length = 118
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 93 attggatcccgccttgcatcaa 114
||||||||||||||||||||||
Sbjct: 93 attggatcccgccttgcatcaa 114
