miRNEST 2.0, an integrative microRNA resource :: BLAST
>54532_sly-miR156a:pmrd
Length = 100
Score = 198 bits (100), Expect = 8e-52
Identities = 100/100 (100%)
Strand = Plus / Plus
Query: 21 ttgacagaagatagagagcactaatgatgatatgctaatttcattcaatttgggcagcaa 80
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttgacagaagatagagagcactaatgatgatatgctaatttcattcaatttgggcagcaa 60
Query: 81 aagcatctcaattcatttgtgctctctatgcttctgtcat 120
||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aagcatctcaattcatttgtgctctctatgcttctgtcat 100
>54661_stu-miR157a:pmrd
Length = 91
Score = 127 bits (64), Expect = 2e-30
Identities = 90/100 (90%), Gaps = 9/100 (9%)
Strand = Plus / Plus
Query: 21 ttgacagaagatagagagcactaatgatgatatgctaatttcattcaatttgggcagcaa 80
||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 1 ttgacagaagatagagagcactaatgatgatatgctaatttcatt---------cagcaa 51
Query: 81 aagcatctcaattcatttgtgctctctatgcttctgtcat 120
|||||||||| |||||||||||||||||||||||||||||
Sbjct: 52 aagcatctcacttcatttgtgctctctatgcttctgtcat 91
>48790_nta-miR157:pmrd
Length = 131
Score = 75.8 bits (38), Expect = 8e-15
Identities = 41/42 (97%)
Strand = Plus / Plus
Query: 79 aaaagcatctcaattcatttgtgctctctatgcttctgtcat 120
|||||||||||||||||||||||||||||||||||| |||||
Sbjct: 90 aaaagcatctcaattcatttgtgctctctatgcttccgtcat 131
Score = 46.1 bits (23), Expect = 7e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 21 ttgacagaagatagagagcactaatgatgat 51
||||||||||||||||||||| ||||||||
Sbjct: 1 ttgacagaagatagagagcacagatgatgat 31
>46927_ath-miR157d:pmrd
Length = 221
Score = 63.9 bits (32), Expect = 3e-11
Identities = 41/44 (93%)
Strand = Plus / Plus
Query: 83 gcatctcaattcatttgtgctctctatgcttctgtcatcacctt 126
||||||| |||| | |||||||||||||||||||||||||||||
Sbjct: 157 gcatctctattcctatgtgctctctatgcttctgtcatcacctt 200
Score = 52.0 bits (26), Expect = 1e-07
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 22 tgacagaagatagagagcactaatgatgatatgc 55
||||||||||||||||||||||| |||| |||||
Sbjct: 24 tgacagaagatagagagcactaaggatgctatgc 57
>51600_ptc-miR156j:pmrd
Length = 100
Score = 60.0 bits (30), Expect = 5e-10
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 18 ttgttgacagaagatagagagcactaatgatgatatgc 55
|||||||||||||||||||||||| ||||||||||||
Sbjct: 8 ttgttgacagaagatagagagcacagatgatgatatgc 45
Score = 58.0 bits (29), Expect = 2e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 96 tttgtgctctctatgcttctgtcatcaccttca 128
|||||||||||||||||||||||||||| ||||
Sbjct: 68 tttgtgctctctatgcttctgtcatcactttca 100
>48695_mtr-miR156e:pmrd
Length = 172
Score = 60.0 bits (30), Expect = 5e-10
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 18 ttgttgacagaagatagagagcactaatgatgatatgc 55
|||||||||||||||||||||||| ||||||||||||
Sbjct: 3 ttgttgacagaagatagagagcacagatgatgatatgc 40
Score = 58.0 bits (29), Expect = 2e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 96 tttgtgctctctatgcttctgtcatcacc 124
|||||||||||||||||||||||||||||
Sbjct: 144 tttgtgctctctatgcttctgtcatcacc 172
>48531_gma-miR156d:pmrd
Length = 151
Score = 60.0 bits (30), Expect = 5e-10
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 18 ttgttgacagaagatagagagcactaatgatgatatgc 55
|||||||||||||||||||||||| ||||||||||||
Sbjct: 18 ttgttgacagaagatagagagcacagatgatgatatgc 55
Score = 58.0 bits (29), Expect = 2e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 96 tttgtgctctctatgcttctgtcatcaccttca 128
|||||||||||||| ||||||||||||||||||
Sbjct: 108 tttgtgctctctatacttctgtcatcaccttca 140
>48393_bra-miR157a:pmrd
Length = 149
Score = 60.0 bits (30), Expect = 5e-10
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 18 ttgttgacagaagatagagagcactaatgatgatatgc 55
||||||||||||||||||||||||||| ||||| ||||
Sbjct: 11 ttgttgacagaagatagagagcactaaggatgacatgc 48
>48384_bol-miR157a:pmrd
Length = 106
Score = 60.0 bits (30), Expect = 5e-10
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 18 ttgttgacagaagatagagagcactaatgatgatatgc 55
||||||||||||||||||||||||||| ||||| ||||
Sbjct: 3 ttgttgacagaagatagagagcactaaggatgacatgc 40
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 96 tttgtgctctctatgcttctgtca 119
|||||||||||||| |||||||||
Sbjct: 78 tttgtgctctctatacttctgtca 101
>48338_bna-miR156c:pmrd
Length = 155
Score = 60.0 bits (30), Expect = 5e-10
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 18 ttgttgacagaagatagagagcactaatgatgatatgc 55
||||||||||||||||||||||||||| ||||| ||||
Sbjct: 15 ttgttgacagaagatagagagcactaaggatgacatgc 52
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 96 tttgtgctctctatgcttctgtca 119
|||||||||||||| |||||||||
Sbjct: 114 tttgtgctctctatacttctgtca 137
>48337_bna-miR156b:pmrd
Length = 208
Score = 60.0 bits (30), Expect = 5e-10
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 18 ttgttgacagaagatagagagcactaatgatgatatgc 55
||||||||||||||||||||||||||| ||||| ||||
Sbjct: 22 ttgttgacagaagatagagagcactaaggatgacatgc 59
>46926_ath-miR157c:pmrd
Length = 217
Score = 60.0 bits (30), Expect = 5e-10
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 18 ttgttgacagaagatagagagcactaatgatgatatgc 55
||||||||||||||||||||||||||| ||||| ||||
Sbjct: 21 ttgttgacagaagatagagagcactaaggatgacatgc 58
Score = 48.1 bits (24), Expect = 2e-06
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 83 gcatctcaattcatttgtgctctctatgcttctgtcatcacctt 126
||||||| | || |||||||||||||| ||||||||| ||||||
Sbjct: 152 gcatctctactcttttgtgctctctatacttctgtcaccacctt 195
>52045_ptc-miRf10223-akr:pmrd
Length = 86
Score = 58.0 bits (29), Expect = 2e-09
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 19 tgttgacagaagatagagagcactaatgatgatatgc 55
||||||||||||||||||||||| ||||||||||||
Sbjct: 1 tgttgacagaagatagagagcacagatgatgatatgc 37
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 96 tttgtgctctctatgcttctgtcatca 122
|||||||||||||||||||||||||||
Sbjct: 60 tttgtgctctctatgcttctgtcatca 86
>48532_gma-miR156e:pmrd
Length = 124
Score = 58.0 bits (29), Expect = 2e-09
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 19 tgttgacagaagatagagagcactaatgatgatatgc 55
|||||||||||||||||||||||| ||||||| ||||
Sbjct: 19 tgttgacagaagatagagagcactgatgatgaaatgc 55
>51599_ptc-miR156i:pmrd
Length = 99
Score = 56.0 bits (28), Expect = 7e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 96 tttgtgctctctatgcttctgtcatcaccttc 127
||||||||||||||||||||| ||||||||||
Sbjct: 68 tttgtgctctctatgcttctgccatcaccttc 99
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 18 ttgttgacagaagatagagagcac 41
||||||||||||||||||||||||
Sbjct: 8 ttgttgacagaagatagagagcac 31
>54774_vvi-miR156i:pmrd
Length = 103
Score = 54.0 bits (27), Expect = 3e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 96 tttgtgctctctatgcttctgtcatcacctt 126
|||||||||||||| ||||||||||||||||
Sbjct: 67 tttgtgctctctattcttctgtcatcacctt 97
Score = 52.0 bits (26), Expect = 1e-07
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 18 ttgttgacagaagatagagagcactaatgatgatatgc 55
|||||||||||||||||||||||| ||||||| ||||
Sbjct: 8 ttgttgacagaagatagagagcacagatgatgaaatgc 45
>48698_mtr-miR157:pmrd
Length = 111
Score = 54.0 bits (27), Expect = 3e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 21 ttgacagaagatagagagcactaatgatgatatgc 55
|||||||||||||||| ||||||| ||||||||||
Sbjct: 1 ttgacagaagatagagggcactaaggatgatatgc 35
>48631_gra-miR157b:pmrd
Length = 91
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 96 tttgtgctctctatgcttctgtcatca 122
|||||||||||||||||||||||||||
Sbjct: 63 tttgtgctctctatgcttctgtcatca 89
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 18 ttgttgacagaagatagagagcac 41
||||||||||||||||||||||||
Sbjct: 2 ttgttgacagaagatagagagcac 25
>48537_gma-miR157c:pmrd
Length = 84
Score = 54.0 bits (27), Expect = 3e-08
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 21 ttgacagaagatagagagcactaatgatgatatgc 55
|||||||||||||||||||||| ||||||| ||||
Sbjct: 84 ttgacagaagatagagagcactgatgatgaaatgc 50
>54772_vvi-miR156g:pmrd
Length = 103
Score = 52.0 bits (26), Expect = 1e-07
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 18 ttgttgacagaagatagagagcactaatgatgat 51
|||||||||||||||||||||||| ||||||||
Sbjct: 8 ttgttgacagaagatagagagcacagatgatgat 41
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 96 tttgtgctctctatgcttctgtcatcacct 125
||||||||||||| |||||||||||||||
Sbjct: 67 tttgtgctctctagacttctgtcatcacct 96
>51597_ptc-miR156g:pmrd
Length = 103
Score = 52.0 bits (26), Expect = 1e-07
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 18 ttgttgacagaagatagagagcactaatgatgatatgc 55
|||||||||||||||||||||||| ||||||| ||||
Sbjct: 8 ttgttgacagaagatagagagcacagatgatgaaatgc 45
Score = 50.1 bits (25), Expect = 4e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 96 tttgtgctctctatgcttctgtcatcaccttca 128
||||||||||||| ||||||||||||||||||
Sbjct: 71 tttgtgctctctagtcttctgtcatcaccttca 103
>46862_aqc-miR156b:pmrd
Length = 83
Score = 52.0 bits (26), Expect = 1e-07
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 22 tgacagaagatagagagcactaatgatgatatgc 55
|||||||||||||||||||| ||||||||||||
Sbjct: 1 tgacagaagatagagagcacagatgatgatatgc 34
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 96 tttgtgctctctatgcttctgtcatc 121
||||||||||||||||||||||||||
Sbjct: 58 tttgtgctctctatgcttctgtcatc 83
>51598_ptc-miR156h:pmrd
Length = 103
Score = 50.1 bits (25), Expect = 4e-07
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 19 tgttgacagaagatagagagcactaatgatgatatgc 55
|||||||||||||||||||||||| | ||||| ||||
Sbjct: 9 tgttgacagaagatagagagcactgacgatgaaatgc 45
Score = 50.1 bits (25), Expect = 4e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 96 tttgtgctctctatgcttctgtcatcaccttca 128
||||||||||||| ||||||||||||||||||
Sbjct: 71 tttgtgctctctagtcttctgtcatcaccttca 103
>48697_mtr-miR156h:pmrd
Length = 94
Score = 50.1 bits (25), Expect = 4e-07
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 19 tgttgacagaagatagagagcactaatgatgatatgc 55
||||||||||||||||||||||| ||||||| ||||
Sbjct: 4 tgttgacagaagatagagagcacagatgatgaaatgc 40
Score = 44.1 bits (22), Expect = 3e-05
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 91 attcatttgtgctctctatgcttctgtcatcacc 124
|||| |||||||||| ||| ||||||||||||||
Sbjct: 61 attcctttgtgctctttattcttctgtcatcacc 94
>48630_gra-miR157a:pmrd
Length = 101
Score = 50.1 bits (25), Expect = 4e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 96 tttgtgctctctatgcttctgtcatcacc 124
|||||||||| ||||||||||||||||||
Sbjct: 73 tttgtgctctttatgcttctgtcatcacc 101
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 18 ttgttgacagaagatagagagcac 41
||||||||||||||||||||||||
Sbjct: 2 ttgttgacagaagatagagagcac 25
>54533_sly-miR156b:pmrd
Length = 84
Score = 48.1 bits (24), Expect = 2e-06
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 21 ttgacagaagatagagagcactaatgatgatatgctaatt 60
||||||||||||||||||||| ||| |||| ||||||||
Sbjct: 1 ttgacagaagatagagagcacgaataatgaggtgctaatt 40
>52807_ptc-miRf10985-akr:pmrd
Length = 87
Score = 48.1 bits (24), Expect = 2e-06
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 20 gttgacagaagatagagagcactaatgatgatatgc 55
||||||||||||||||||||||| | ||||| ||||
Sbjct: 1 gttgacagaagatagagagcactgacgatgaaatgc 36
>48696_mtr-miR156f:pmrd
Length = 94
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 18 ttgttgacagaagatagagagcac 41
||||||||||||||||||||||||
Sbjct: 3 ttgttgacagaagatagagagcac 26
>46924_ath-miR157a:pmrd
Length = 98
Score = 48.1 bits (24), Expect = 2e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 19 tgttgacagaagatagagagcactaatgatga 50
||||||||||||||||||||||| |||||||
Sbjct: 2 tgttgacagaagatagagagcacagatgatga 33
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 96 tttgtgctctctatgcttctgtcatcacc 124
||||||||||||| ||||||||||||||
Sbjct: 70 tttgtgctctctagccttctgtcatcacc 98
>46861_aqc-miR156a:pmrd
Length = 81
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 96 tttgtgctctctatgcttctgtca 119
||||||||||||||||||||||||
Sbjct: 56 tttgtgctctctatgcttctgtca 79
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 22 tgacagaagatagagagcac 41
||||||||||||||||||||
Sbjct: 1 tgacagaagatagagagcac 20
>54771_vvi-miR156f:pmrd
Length = 105
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 19 tgttgacagaagatagagagcac 41
|||||||||||||||||||||||
Sbjct: 9 tgttgacagaagatagagagcac 31
>48530_gma-miR156c:pmrd
Length = 185
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 19 tgttgacagaagatagagagcac 41
|||||||||||||||||||||||
Sbjct: 144 tgttgacagaagatagagagcac 166
>46925_ath-miR157b:pmrd
Length = 132
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 19 tgttgacagaagatagagagcac 41
|||||||||||||||||||||||
Sbjct: 17 tgttgacagaagatagagagcac 39
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 96 tttgtgctctctatgcttctgtcatcacc 124
||||||||||||| ||||||||||||||
Sbjct: 85 tttgtgctctctagccttctgtcatcacc 113
>48642_han-miR157a:pmrd
Length = 86
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 99 gtgctctctatgcttctgtcat 120
||||||||||||||||||||||
Sbjct: 65 gtgctctctatgcttctgtcat 86
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 21 ttgacagaagatagagagcac 41
|||||||||||||||||||||
Sbjct: 1 ttgacagaagatagagagcac 21
>54534_sly-miR156c:pmrd
Length = 83
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 21 ttgacagaagatagagagcac 41
|||||||||||||||||||||
Sbjct: 1 ttgacagaagatagagagcac 21
>48675_lja-miR157a:pmrd
Length = 58
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 21 ttgacagaagatagagagcac 41
|||||||||||||||||||||
Sbjct: 1 ttgacagaagatagagagcac 21
>54570_smo-miR156b:pmrd
Length = 112
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 22 tgacagaagatagagagcac 41
||||||||||||||||||||
Sbjct: 12 tgacagaagatagagagcac 31
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 99 gtgctctctatgcttctgtcatca 122
||||||||||| ||||||||||||
Sbjct: 80 gtgctctctattcttctgtcatca 103
>54537_sly-miR157c:pmrd
Length = 123
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 21 ttgacagaagatagagagca 40
||||||||||||||||||||
Sbjct: 103 ttgacagaagatagagagca 122
>54536_sly-miR157b:pmrd
Length = 430
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 21 ttgacagaagatagagagca 40
||||||||||||||||||||
Sbjct: 1 ttgacagaagatagagagca 20
>54535_sly-miR157a:pmrd
Length = 53
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 21 ttgacagaagatagagagca 40
||||||||||||||||||||
Sbjct: 1 ttgacagaagatagagagca 20
>51552_pta-miR156b:pmrd
Length = 83
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 22 tgacagaagatagagagcac 41
||||||||||||||||||||
Sbjct: 3 tgacagaagatagagagcac 22
>51551_pta-miR156a:pmrd
Length = 83
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 22 tgacagaagatagagagcac 41
||||||||||||||||||||
Sbjct: 3 tgacagaagatagagagcac 22
>51323_pco-miR157:pmrd
Length = 184
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 21 ttgacagaagatagagagca 40
||||||||||||||||||||
Sbjct: 1 ttgacagaagatagagagca 20
>48677_lja-miR157c:pmrd
Length = 460
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 21 ttgacagaagatagagagca 40
||||||||||||||||||||
Sbjct: 1 ttgacagaagatagagagca 20
>48670_ini-miR157b:pmrd
Length = 183
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 21 ttgacagaagatagagagca 40
||||||||||||||||||||
Sbjct: 1 ttgacagaagatagagagca 20
>48669_ini-miR157a:pmrd
Length = 126
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 21 ttgacagaagatagagagca 40
||||||||||||||||||||
Sbjct: 1 ttgacagaagatagagagca 20
>48668_iba-miR157:pmrd
Length = 283
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 21 ttgacagaagatagagagca 40
||||||||||||||||||||
Sbjct: 1 ttgacagaagatagagagca 20
