miRNEST 2.0, an integrative microRNA resource :: BLAST
>54540_sly-miR159:pmrd
Length = 177
Score = 337 bits (170), Expect = 2e-93
Identities = 177/178 (99%), Gaps = 1/178 (0%)
Strand = Plus / Plus
Query: 12 tggagctccttgaagtccaacaaaaaatctaacaggttaaattgagctgctgacctatgg 71
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tggagctccttgaagtccaacaaaaaatctaacaggttaaattgagctgctgacctatgg 60
Query: 72 attcctcagccctatctatttatgatttcaaacatatagataggtttgtgggtttgcata 131
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 61 attcctcagccctatctatttatgatttcaaacatatagataggttt-tgggtttgcata 119
Query: 132 tgtcaggagctttattttaccctttgtttgatcattttttggattgaagggagctcta 189
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120 tgtcaggagctttattttaccctttgtttgatcattttttggattgaagggagctcta 177
>54777_vvi-miR159c:pmrd
Length = 190
Score = 63.9 bits (32), Expect = 4e-11
Identities = 68/80 (85%)
Strand = Plus / Plus
Query: 8 ggagtggagctccttgaagtccaacaaaaaatctaacaggttaaattgagctgctgacct 67
|||||||||||||||||||||||| | | ||| || || || |||||||||||||| |
Sbjct: 5 ggagtggagctccttgaagtccaatagagggtcttactgggtagattgagctgctgactt 64
Query: 68 atggattcctcagccctatc 87
|||||| || ||||||||||
Sbjct: 65 atggatcccacagccctatc 84
Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 169 tttggattgaagggagctctaca 191
|||||||||||||||||||||||
Sbjct: 160 tttggattgaagggagctctaca 182
>51603_ptc-miR159b:pmrd
Length = 187
Score = 60.0 bits (30), Expect = 7e-10
Identities = 57/65 (87%), Gaps = 2/65 (3%)
Strand = Plus / Plus
Query: 125 ttgcatatgtcaggagctttattttaccctttgtttgatcattttttggattgaagggag 184
|||||||| |||||||||||||| ||| |||| |||| |||||||||||||||||||
Sbjct: 116 ttgcatatctcaggagctttatt--acctaatgttagatctttttttggattgaagggag 173
Query: 185 ctcta 189
|||||
Sbjct: 174 ctcta 178
Score = 48.1 bits (24), Expect = 3e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 8 ggagtggagctccttgaagtccaa 31
||||||||||||||||||||||||
Sbjct: 7 ggagtggagctccttgaagtccaa 30
>52093_ptc-miRf10271-akr:pmrd
Length = 174
Score = 50.1 bits (25), Expect = 6e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 7 gggagtggagctccttgaagtccaa 31
|||||||||||||||||||||||||
Sbjct: 1 gggagtggagctccttgaagtccaa 25
Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 167 tttttggattgaagggagctcta 189
|||||||||||||||||||||||
Sbjct: 147 tttttggattgaagggagctcta 169
>51604_ptc-miR159c:pmrd
Length = 183
Score = 50.1 bits (25), Expect = 6e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 7 gggagtggagctccttgaagtccaa 31
|||||||||||||||||||||||||
Sbjct: 6 gggagtggagctccttgaagtccaa 30
Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 167 tttttggattgaagggagctcta 189
|||||||||||||||||||||||
Sbjct: 152 tttttggattgaagggagctcta 174
>51602_ptc-miR159a:pmrd
Length = 183
Score = 50.1 bits (25), Expect = 6e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 7 gggagtggagctccttgaagtccaa 31
|||||||||||||||||||||||||
Sbjct: 6 gggagtggagctccttgaagtccaa 30
Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 167 tttttggattgaagggagctcta 189
|||||||||||||||||||||||
Sbjct: 152 tttttggattgaagggagctcta 174
>48701_mtr-miR159c:pmrd
Length = 44
Score = 48.1 bits (24), Expect = 3e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 169 tttggattgaagggagctctacat 192
||||||||||||||||||||||||
Sbjct: 1 tttggattgaagggagctctacat 24
>48728_mtr-miR319b:pmrd
Length = 42
Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 170 ttggattgaagggagctctacat 192
|||||||||||||||||||||||
Sbjct: 1 ttggattgaagggagctctacat 23
>48686_ltu-miR159:pmrd
Length = 345
Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 169 tttggattgaagggagctctaca 191
|||||||||||||||||||||||
Sbjct: 1 tttggattgaagggagctctaca 23
>48539_gma-miR159a:pmrd
Length = 214
Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 169 tttggattgaagggagctctaca 191
|||||||||||||||||||||||
Sbjct: 175 tttggattgaagggagctctaca 197
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 10 agtggagctccttgaagtccaa 31
||||||||||||||||||||||
Sbjct: 19 agtggagctccttgaagtccaa 40
>48395_bra-miR159a:pmrd
Length = 185
Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 169 tttggattgaagggagctctaca 191
|||||||||||||||||||||||
Sbjct: 163 tttggattgaagggagctctaca 185
>48339_bna-miR159:pmrd
Length = 183
Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 169 tttggattgaagggagctctaca 191
|||||||||||||||||||||||
Sbjct: 161 tttggattgaagggagctctaca 183
>54378_pvu-miR159:pmrd
Length = 174
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 169 tttggattgaagggagctctac 190
||||||||||||||||||||||
Sbjct: 153 tttggattgaagggagctctac 174
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 gtggagctccttgaagtccaa 31
|||||||||||||||||||||
Sbjct: 1 gtggagctccttgaagtccaa 21
>54377_pvu-miR159:pmrd
Length = 174
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 169 tttggattgaagggagctctac 190
||||||||||||||||||||||
Sbjct: 153 tttggattgaagggagctctac 174
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 gtggagctccttgaagtccaa 31
|||||||||||||||||||||
Sbjct: 1 gtggagctccttgaagtccaa 21
>48824_osa-miR159f:pmrd
Length = 188
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 170 ttggattgaagggagctctaca 191
||||||||||||||||||||||
Sbjct: 159 ttggattgaagggagctctaca 180
>46931_ath-miR159a:pmrd
Length = 184
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 169 tttggattgaagggagctctac 190
||||||||||||||||||||||
Sbjct: 163 tttggattgaagggagctctac 184
>48699_mtr-miR159a:pmrd
Length = 168
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 169 tttggattgaagggagctcta 189
|||||||||||||||||||||
Sbjct: 148 tttggattgaagggagctcta 168
>54937_zma-miR159m:pmrd
Length = 457
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 169 tttggattgaagggagctct 188
||||||||||||||||||||
Sbjct: 1 tttggattgaagggagctct 20
>54931_zma-miR159b:pmrd
Length = 221
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 169 tttggattgaagggagctct 188
||||||||||||||||||||
Sbjct: 182 tttggattgaagggagctct 201
>54930_zma-miR159a:pmrd
Length = 246
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 169 tttggattgaagggagctct 188
||||||||||||||||||||
Sbjct: 207 tttggattgaagggagctct 226
>54674_tae-miR159b:pmrd
Length = 255
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 169 tttggattgaagggagctct 188
||||||||||||||||||||
Sbjct: 230 tttggattgaagggagctct 249
>54673_tae-miR159a:pmrd
Length = 177
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 169 tttggattgaagggagctct 188
||||||||||||||||||||
Sbjct: 154 tttggattgaagggagctct 173
>54653_spr-miR159:pmrd
Length = 392
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 169 tttggattgaagggagctct 188
||||||||||||||||||||
Sbjct: 1 tttggattgaagggagctct 20
>54631_sof-miR159d:pmrd
Length = 265
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 169 tttggattgaagggagctct 188
||||||||||||||||||||
Sbjct: 226 tttggattgaagggagctct 245
>54629_sof-miR159b:pmrd
Length = 266
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 169 tttggattgaagggagctct 188
||||||||||||||||||||
Sbjct: 227 tttggattgaagggagctct 246
>54628_sof-miR159a:pmrd
Length = 265
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 169 tttggattgaagggagctct 188
||||||||||||||||||||
Sbjct: 226 tttggattgaagggagctct 245
>54392_sar-miR159:pmrd
Length = 175
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 169 tttggattgaagggagctct 188
||||||||||||||||||||
Sbjct: 155 tttggattgaagggagctct 174
>51562_pta-miR319:pmrd
Length = 206
Score = 40.1 bits (20), Expect = 6e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 164 cattttttggattgaagggagctc 187
||||| ||||||||||||||||||
Sbjct: 32 catttcttggattgaagggagctc 9
>51553_pta-miR159a:pmrd
Length = 210
Score = 40.1 bits (20), Expect = 6e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 164 cattttttggattgaagggagctc 187
||||| ||||||||||||||||||
Sbjct: 179 catttcttggattgaagggagctc 202
>51338_pgl-miR159:pmrd
Length = 226
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 169 tttggattgaagggagctct 188
||||||||||||||||||||
Sbjct: 206 tttggattgaagggagctct 225
>48825_osa-miR159m:pmrd
Length = 249
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 169 tttggattgaagggagctct 188
||||||||||||||||||||
Sbjct: 229 tttggattgaagggagctct 248
